Labshake search
Citations for Illumina :
251 - 300 of 1002 citations for Primary Human Melanocyte Cells since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2023Quote: ... or S4 flow cell (Illumina). The average number of read pairs per normal was 614 million and the average number of read pairs per tumor was 1.3 billion.
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bioRxiv - Cancer Biology 2021Quote: ... Single cell derived cDNA libraries were sequenced on NovaSeq S4 cell sequencer (Illumina, San Diego, CA). Cellranger (10x Genomics ...
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bioRxiv - Cancer Biology 2021Quote: ... cells were tagmented with TDE1 (Illumina) for 30 min at 37°C ...
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bioRxiv - Synthetic Biology 2019Quote: ... A MiSeq nano flow cell (Illumina) was clustered with a 4pM library comprised of 90% PhiX and 10% PCR-prepared library ...
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bioRxiv - Genetics 2020Quote: ... 100 cycles flow cell (Illumina Inc.). Amplified fragmented cDNA of 300 bp in size were sequenced in single-end mode with a read length of 100 bp ...
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bioRxiv - Cancer Biology 2021Quote: ... 2 × 150 bp flow cells (Illumina).
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bioRxiv - Cell Biology 2020Quote: ... loaded on a flow cell (Illumina) and sequenced on a NextSeq 500 platform (Illumina ...
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bioRxiv - Cell Biology 2020Quote: ... loaded on a flow cell (Illumina) and sequenced on a HiSeq 4000 platform (Illumina ...
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Human CCR6+ Th cells show both an extended stable gradient of Th17 activity and imprinted plasticitybioRxiv - Immunology 2023Quote: ... and analyzed using Cell Ranger (Illumina).
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bioRxiv - Developmental Biology 2024Quote: ... 150 cycles flow cells (Illumina, 20024907). Library preparations of one sample per genotype were run on a single flow cell ...
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bioRxiv - Cell Biology 2021Quote: ... Cells were submitted for 10x library preparation for 3’ single cell sequencing on a NovaSeq 6000 (Illumina) at the Cancer Research UK Cambridge Institute ...
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bioRxiv - Genomics 2021Quote: ... cell line DNA mixes and patients’ libraries were sequenced using a single NovaSeq SP flow cell (Illumina). 10% PhiX was used to ensure sufficient library complexity.
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bioRxiv - Cancer Biology 2022Quote: ... 2500-5000 cells were sequenced at a depth of 50000-100000 reads per cell on a NovaSeq (Illumina). Preprocessing of the data was performed using CellRanger (10x Genomics) ...
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bioRxiv - Cancer Biology 2023Quote: We generated RNA-seq data from the H1299 non-small cell lung cancer cell line with 108,321,106 reads (TrueSeq RNA v2 100 bp paired-end library and Illumina HiSeq2500 machine from Illumina ...
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bioRxiv - Cell Biology 2023Quote: ... Cells were sequenced at a target read depth of 75,000 reads/cell using a HiSeq 4000 sequencer (Illumina). Single-cell counts were generated from unaligned reads by sequence alignment and de-multiplexing using Cell Ranger from 10x Genomics ...
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bioRxiv - Cell Biology 2020Quote: ... Cell sheets transcriptomes were sequenced by Illumina NextSeq®500 Wide Genome Sequencing system (Illumina ...
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bioRxiv - Microbiology 2021Quote: ... sequenced in a MiSeq flow cell (Illumina) for 250 cycles from one end of the fragment and analyzed with Casava 1.8.
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bioRxiv - Molecular Biology 2021Quote: ... High output 150 cycles flow cell (Illumina), with the following parameters ...
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bioRxiv - Developmental Biology 2021Quote: ... Cells were counted and 50,000 cells were isolated for processing with the Nextera Tn5 enzyme (Illumina FC-131-1096) as previously described (Buenrostro et al. ...
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bioRxiv - Bioengineering 2022Quote: ... and 1 ×107 cells from each gate were barcoded and the sequences for each cell were determined by Illumina next-generation sequencing15 ...
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bioRxiv - Cancer Biology 2022Quote: Gene expression data was generated with the Chromium Single Cell 5’ v3.1 assay (10X Genomics) and sequenced on the NovaSeq 6000 platform (S1 flow cell, Illumina). To generate gene-barcode count matrices ...
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bioRxiv - Cancer Biology 2019Quote: ... Single cell library preparation was performed using a Chromium Single Cell 3’ Reagent Kit v3 (10X Genomics) and sequenced by Illumina HiSeq ...
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bioRxiv - Physiology 2021Quote: ... The single cell ATAC analysis was conducted using a 10X Chromium single cell system (10X Genomics) and a NovaSeq 6000 sequencer (Illumina) at the Indiana University School of Medicine Center for Medical Genomics Core ...
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bioRxiv - Cancer Biology 2021Quote: ... for single-cell RNA sequencing (with the 10X Genomics single-cell gene expression kit, a 400M read flow cell & single-end read using HiSeq from Illumina). 2,453 cells were sequenced with an average of 64,404 reads (and 3,457 genes ...
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bioRxiv - Neuroscience 2022Quote: ... cells were harvested and prepared with 10X Chromium Single Cell 3’ Reagents V3 and sequenced on a NovaSeq 6000 (Illumina) using a S2 flow cell at 2 × 100bp ...
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bioRxiv - Immunology 2019Quote: ... Tissues were dissociated into single cell preparations and all cells were run through Drop-seq protocol and sequenced on a HiSeq 2500 (Illumina)(28) ...
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Nonsense Mediated RNA Decay Is a Unique Vulnerability of Cancer Cells with SF3B1 and U2AF1 MutationsbioRxiv - Cell Biology 2021Quote: ... RNA-sequencing libraries were then prepared from RNA isolated from the bulk mutant AML bone marrow cells and the normal CD34+ bone marrow cells using TruSeq Stranded Total RNA kit (Illumina) described above ...
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bioRxiv - Immunology 2022Quote: Samples were prepared using a Chromium Single Cell 3’ Reagent Kit (10x Genomics) and run on a NovaSeq S4-200 cell (Illumina).
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bioRxiv - Neuroscience 2022Quote: ... cells were harvested and prepared with 10X Chromium Single Cell 3’ Reagents V3 and sequenced on a NovaSeq 6000 (Illumina) using a S2 flow cell at 2 × 100bp ...
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bioRxiv - Cancer Biology 2023Quote: ... sequences (9 Go for cell lines and 15 Go for acinar cells) were generated using a NovaSeq 6000 apparatus (Illumina) by Novogen (Cambridge ...
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bioRxiv - Cancer Biology 2022Quote: ... flow-sorted tdT+ cells (25,000 cells in duplicates) were lysed to prepare nuclear pellets which then underwent transposition with TDE1 Enzyme (Illumina, 20034197). Tagmented DNA was purified using Zymo DNA Clean and Concentrator-5 Kit (cat# D4014 ...
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bioRxiv - Cancer Biology 2021Quote: ... samples were sequenced (Nova6000 SP flow cell (Illumina) 50 bp PE ...
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bioRxiv - Cancer Biology 2019Quote: ... For tumor cells (sequenced by Illumina HiSeq 2500), genes with detected expression in at least 5 cells were included and cells with either less than 600 genes and 1500 UMI or more than 4000 genes and 20000 UMI were excluded ...
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Low basal expression and slow induction of IFITM3 puts immune cells at risk of influenza A infectionbioRxiv - Immunology 2019Quote: ... Final cell lines were further validated by Illumina MiSeq ...
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bioRxiv - Genomics 2021Quote: ... or on the Novaseq (S2 flow cell; Illumina) with a 100 cycle kit and the following read structure ...
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bioRxiv - Systems Biology 2020Quote: ... or Micro flow cell (MS-103-1002, Illumina) with 151×2 paired end run parameters according to manufacturer’s manual ...
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bioRxiv - Genetics 2021Quote: ... Cells were sequenced on the NovaSeq 5000 (Illumina) at 26x98bp ...
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bioRxiv - Immunology 2021Quote: ... Final cell lines were further validated by Illumina MiSeq ...
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bioRxiv - Bioengineering 2023Quote: ... Single-cell libraries were sequenced on NovaSeq (Illumina) to a depth of 50,000 reads per cell.
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bioRxiv - Molecular Biology 2023Quote: ... using a P3 200 flow cell (Illumina: 20046812). The pooled library was loaded at 750 pM and sequencing was carried out with read lengths of 2x101 bp ...
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bioRxiv - Genomics 2024Quote: ... Cells were washed with MiSeq buffer PR2 (Illumina), and perturbation barcodes were analyzed by sequencing-by-synthesis using reagents from used Illumina NextSeq 2000 P2 cassettes ...
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bioRxiv - Immunology 2024Quote: ... All clonal cell lines were genotyped by Illumina sequencing and phenotyped for absence of protein production by western blot.
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bioRxiv - Genomics 2023Quote: ... Libraries were then diluted and sequenced on a NextSeq 500 Mid flow cell or a NovaSeq 6000 S4 flow cell (Illumina Inc.).
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bioRxiv - Immunology 2023Quote: ... single-cell RNA-seq libraries were pooled and sequenced on a NovaSeq 6000 instrument using an S1 flow cell (Illumina 20028319).
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bioRxiv - Immunology 2023Quote: ... Single cell libraries were prepared from 10,000 cells per pooled sample and sequenced with the NextSeq1000 (Illumina, San Diego, CA, USA) at a depth of > 30,000 paired reads per cell ...
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bioRxiv - Immunology 2022Quote: ... were pooled onto two lanes of an Illumina S2 flow cell and sequenced at a target depth of 25,000 reads per cell on an Illumina NovaSeq (Illumina, San Diego, CA). The 8 paired-end scRNA libraries were similarly pooled and sequenced at a target depth of 50,000 reads per cell ...
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bioRxiv - Immunology 2019Quote: Single-cell RNA-sequencing libraries were generated using the 10x Genomics Single Cell 3’ Solution (version 2) kit and sequenced to an average depth of > 200k reads/cell (Illumina HiSeq 4000). Data analysis was performed using Python3 pipelines (https://github.com/sansomlab/tenx ...
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bioRxiv - Genetics 2019Quote: ... Cell lysate was resuspended in transposition reaction mix (Illumina) and incubated at 37°C for 30 min ...
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Cancer Hallmarks Define a Continuum of Plastic Cell States between Small Cell Lung Cancer ArchetypesbioRxiv - Systems Biology 2021Quote: ... the cells were sequenced using the NextSeq 500 (Illumina). DropEst pipeline was used to process indrops scRNA-seq data and to generate count matrices of each gene in each cell.113 Specifically ...
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bioRxiv - Molecular Biology 2021Quote: ... using an S2 v1.5 100 cycles flow cell (Illumina) with run settings 28-10-10-90 cycles ...