Labshake search
Citations for Illumina :
1 - 50 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genetics 2022Quote: ... After expansion within E.coli the final massively parallel reporter assay (MPRA) plasmid library was sequenced by Illumina 1×30 bp chemistry to acquire a baseline representation of each oligo within the library.
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bioRxiv - Molecular Biology 2020Quote: ... massively-parallel mRNA sequencing approach (Illumina; TruSeq RNA Library Preparation Kit v2 ...
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bioRxiv - Systems Biology 2021Quote: ... massively-parallel mRNA sequencing approach from Illumina (TruSeq stranded total RNA Library Preparation ...
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bioRxiv - Molecular Biology 2020Quote: Massive parallel sequencing were performed by Illumina HiSeq4000 with 75 bp paired-end and converted fastqs by bcl2fastq (ver 2.17.1.14) ...
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bioRxiv - Immunology 2024Quote: ... massively parallel mRNA sequencing approach from Illumina (TruSeq mRNA Library Preparation ...
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bioRxiv - Cell Biology 2021Quote: ... massively-parallel cDNA sequencing (RNA- Seq) protocol from Illumina, the TruSeq Stranded Total RNA ...
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bioRxiv - Microbiology 2024Quote: ... Massive parallel sequencing was conducted using NextSeq 550 System (Illumina Technology) and NextSeq 550 System High-Output Kit to produce ∼4 M Pair Ended reads and 2.4 Gb/sample sequence (Comeau et al. ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Genomic libraries were prepared for parallel sequencing in short-read (Illumina) and long-read (Nanopore ...
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bioRxiv - Immunology 2024Quote: ... and mRNA sequencing libraries were prepared by the OHSU Massively Parallel Sequencing Shared Resource (MPSSR) using the TruSeq Stranded Poly(A)+ Library Prep Kit (Illumina). Barcoded libraries were pooled ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed using the massively parallel sequencing on the Novaseq 6000 platform using Novaseq S4 PE 100 kits (Illumina) to capture the expression of ∼200-5,000 genes/nuclei.
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bioRxiv - Microbiology 2021Quote: ... All libraries were sequenced in parallel on a NovaSeq 6000 PE150 (Illumina).
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bioRxiv - Immunology 2021Quote: ... allowing parallel sequencing of several samples on Illumina HiSeq2000 (Illumina, San Diego, CA). Our amplicon sequences covered the entire CDR3 length and Vβ and Jβ segments in parts and using the Illumina paired-end technology (2x 100 bp ...
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bioRxiv - Evolutionary Biology 2021Quote: ... were sequenced for a parallel research project and short reads produced by Illumina sequencing were available (Novaseq ...
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bioRxiv - Genomics 2021Quote: ... Sequencing was performed using massively parallel sequencing on the Novaseq S4 platform (Illumina). We produced ∼40,000 - 50,000 reads per cell capturing the expression of ∼1,000 - 2,000 transcripts per cell.
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bioRxiv - Bioengineering 2024Quote: ... gel purified and subjected to massively parallel sequencing with a MiSeq instrument (Illumina), using 75-bp paired-end sequencing.
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bioRxiv - Cell Biology 2022Quote: ... All CORALL generated libraries were sequenced in parallel on 4 Novaseq S4 lanes (Illumina). RNA sequencing libraries for the differential sedimentation speed based cell fractionation experiment were performed using QuantSeq 3’ mRNA-Seq kit (Lexogen ...
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bioRxiv - Cancer Biology 2020Quote: ... Massively parallel sequencing was carried out in a High-Seq® machine (Illumina, USA) with a 100bp paired end (PE ...
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bioRxiv - Molecular Biology 2024Quote: ... Uniquely indexed sample libraries were pooled together in equimolar amounts and sequenced in parallel on an Illumina NextSeq instrument using a 600 cycle (2×300) P1 kit (Illumina, San Diego, CA, US).
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bioRxiv - Genomics 2022Quote: ... indexed libraries were sequenced with massively parallel sequencing machines (either NextSeq500 or NextSeq2000, Illumina Inc.) and the appropriate kits producing 2 x 150 bp paired-end reads ...
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bioRxiv - Genetics 2022Quote: ... were then subjected to validation using massive parallel amplicon sequencing (MPAS, AmpliSeq Illumina Custom DNA Panel), to orthogonally assess each mutation in sperm donors ...
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bioRxiv - Cancer Biology 2024Quote: ... and subjected to massive parallel amplicon sequencing carried out by an Illumina sequencer (Sanger/Illumina 1.9). The sgRNA read count and hits calling were analyzed by the MAGeCK v0.5.7 algorithm18.
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bioRxiv - Genomics 2020Quote: ... allowing parallel sequencing of multiple libraries on the Illumina NextSeq 500 sequencer (Illumina, San Diego, California, USA). Cycle number was limited to 14 cycles ...
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bioRxiv - Genetics 2023Quote: ... but the results were verified using the data from the parallel genome assemblies that were made from Illumina and nanopore reads as well as the transcriptome assemblies produced using Trinity.
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bioRxiv - Molecular Biology 2021Quote: ... with the TruSeq® Stranded mRNA assay kit (Illumina) employed as per manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2021Quote: ... The flow cell underwent cluster amplification and massively parallel sequencing by synthesis using Illumina v.4 chemistry and paired-end 100-bp reads (Illumina).
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bioRxiv - Microbiology 2021Quote: An aliquot of cell lysates harvested from ribosome profiling (Ribo-seq) experiments above was processed in parallel for RNA-seq using TruSeq Stranded mRNA library prep (Illumina) following extraction using Zymo RNA-Clean and Concentrator (5 ...
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bioRxiv - Developmental Biology 2023Quote: ... poly-A selection and RNA-sequencing library preparation was done using non strand massively-parallel cDNA sequencing (mRNA-Seq) protocol from Illumina, the TruSeq RNA Library Preparation Kit v2 ...
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bioRxiv - Neuroscience 2024Quote: ... Bulk RNA-Seq libraries were performed using 100ng of total RNA of a nonstranded RNA Seq massively parallel mRNA sequencing approach from Illumina (TruSeq RNA Library Preparation Kit v2 ...
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bioRxiv - Immunology 2024Quote: ... Illumina sequencing was performed on prepared libraries by the OHSU Massively Parallel Sequencing Shared Resource using a NovaSeq 6000 (Illumina).
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bioRxiv - Cell Biology 2020Quote: Whole exons were subjected to massive parallel sequencing with 150 paired-end reads on a HiSeqX-Ten sequencer (Illumina, San Diego, California). The program provided with the Illumina Pipeline software package was used to process the raw data in FASTQ format following image analysis and base calling ...
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Genomic local adaptation of a generalist plant species to pollinator communities and abiotic factorsbioRxiv - Plant Biology 2022Quote: ... with 16 threads of freebayes running in parallel across regions of 100kb in the de novo polished genome assembly (PacBio, Illumina and Bionano). Single nucleotide polymorphisms (SNPs ...
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bioRxiv - Developmental Biology 2022Quote: ... Tagmentation assays and barcoded sequencing libraries were prepared using Nextera XT kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Microbiology 2024Quote: ... and was accomplished by parallel long read sequencing with Oxford Nanopore (Oxford Nanopore technologies, Oxford, UK) and short read sequencing with Illumina (Illumina Inc., San Diego, CA, USA). DNA for Oxford Nanopore was prepared using the Nanopore Ligation Sequencing kit (SQK-LSK109 ...
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bioRxiv - Developmental Biology 2022Quote: ... DNA was measured again with Qubit dsDNA HS Assay Kit and 65ng of mononucleosomal purified DNA was used for NEBNext Ultra II DNA Library Prep Kit (Illumina) with size selection ...
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bioRxiv - Developmental Biology 2023Quote: ... CUT&Tag assay was performed using NovoNGS CUT&Tag 3.0 High-Sensitivity Kit (for Illumina, Novoprotein scientific Inc. ...
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bioRxiv - Genomics 2023Quote: ... according to the manufacture’s protocol (Vazyme Hyperactive® Universal CUT&Tag Assay Kit for Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... Recommended protocol for Infinium MethylationEPIC Kit was used (Infinium HD Methylation Assay Reference Guide, Illumina). Laboratory procedures were performed by Eurofins Genomics service.
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bioRxiv - Cell Biology 2024Quote: CUT&Tag assay was performed using NovoNGS CUT&Tag 3.0 High-Sensitivity Kit (for Illumina, Novoprotein scientific Inc. ...
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bioRxiv - Biophysics 2023Quote: ... The DNA concentration was measured using the Qubit dsDNA BR assay kit and sequenced using a HiSeq SBS v4 50 cycle kit (Illumina FC-401-4002) and HiSeq SR Cluster Kit v4 (Illumina GD-401-4001 ...
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bioRxiv - Molecular Biology 2022Quote: ... Purified multiplexed libraries were diluted to 2nM concentration (calculated based on the Qubit dsDNA HS Assay Kit) for sequencing using NextSeq 500/550 v2.5 Kit (Illumina, 35bp paired-end reads). Finally ...
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bioRxiv - Molecular Biology 2022Quote: ... prior to mixing of multiplexed libraries diluted to 2nM concentration (calculated based the on Qubit dsDNA HS Assay Kit) for sequencing using the NextSeq 500/550 v2.5 kit (Illumina, 75bp single-end reads). Finally ...
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bioRxiv - Biochemistry 2023Quote: ... The DNA concentration was measured using the Qubit dsDNA BR assay kit and sequenced using a HiSeq SBS v4 50 cycle kit (Illumina FC-401-4002) and HiSeq SR Cluster Kit v4 (Illumina GD-401-4001 ...
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bioRxiv - Molecular Biology 2024Quote: ... cDNA sequencing was performed by the High Throughput Sequencing Core (CHOP) using a standard 3’ assay with the NovaSeq 6000 platform and S1 Reagent Kit v1.5 (Illumina).
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bioRxiv - Immunology 2024Quote: Total leukocytes from patients and healthy donors were isolated and stained with Maxpar Direct Immune Profiling Assay kit (Illumina) of 30 markers ...
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bioRxiv - Molecular Biology 2023Quote: ... Purified multiplex libraries were diluted to 9 nM concentration (calculated based on Qubit dsDNA HS Assay Kit) and sequenced on a NovaSeq 6000 instrument (Illumina) from IntegraGen SA ...
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bioRxiv - Neuroscience 2024Quote: ... Eluted libraries were quantified using a Qubit dsDNA HS Assay Kit and sequenced on a NovaSeq 6000 (Illumina, San Diego, California).
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bioRxiv - Genetics 2020Quote: ... were genotyped in 1,012 F2 mice by Illumina BeadArray genotyping (Illumina Golden Gate assay) on the BeadXpress platform as per the manufacturer’s instructions and were added to the analysis ...
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bioRxiv - Molecular Biology 2023Quote: We constructed an assay for transposase-accessible chromatin (ATAC) using a Tn5-Nextera DNA library prep kit (Illumina, San Diego, CA, USA), following the manufacturer’s protocol (48) ...
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bioRxiv - Developmental Biology 2021Quote: Approximately 50,000 nephron progenitor cells were used to generate each sequencing library for the assay for transposase-accessible chromatin (ATAC-seq) using the Nextera DNA Flex Library Prep Kit (Illumina FC-121-1030) with modifications according to a previously published method (Buenrostro et al. ...
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bioRxiv - Bioengineering 2021Quote: Three replicates of rat skin wounds in each group were detected for the assay of Bulk RNA sequencing (NEBNext® Ultra™ RNA Library Prep Kit for Illumina®), and the results were analyzed for Gene Ontology (GO ...