Labshake search
Citations for Illumina :
1 - 50 of 5398 citations for PI 3065 CAS 955977 50 1 98% since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Immunology 2021Quote: ... (28+98) (Illumina). For the Tbx1LacZ/+Crkl+/- dataset ...
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bioRxiv - Genomics 2024Quote: ... Genotypes were called for SNPs matched to dbSNP v151 51 and for which valid calls were made in >98% of participants using GenomeStudio v2.0 (Illumina, San Diego, CA). Additional SNPs were imputed using the IMPUTE2 software suite G352 and the 1000 Genomes Phase 3 reference panel53 ...
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bioRxiv - Plant Biology 2023Quote: ... and 470 bp and 800 bp for PI 537277 were prepared using the Genomic DNA Sample Prep kit (Illumina, San Diego, CA). Four mate-pair libraries with insert sizes of 5 ...
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bioRxiv - Plant Biology 2020Quote: ... and equally pooled in 1 lane of single end 50 bp sequencing in HiSeq 2000 machine (Illumina, San Diego, CA) at the QB3 facility at UC Berkeley.
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bioRxiv - Cancer Biology 2024Quote: ... and 26 + 98 bp paired-end sequencing was performed using NovaSeq 6000 platform (Illumina).
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bioRxiv - Molecular Biology 2020Quote: ... Sequencing of 50-bp single-ends using HiSeq (Illumina, San Diego, CA, USA) was carried out.
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bioRxiv - Plant Biology 2024Quote: ... Reagent Kit v3 (50-cycles) cartridge (Illumina, San Diego,CA, USA; MS-102-2001)
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bioRxiv - Genomics 2020Quote: ... 50 nt sequencing was performed using a HiSeq 2000 instrument (Illumina, San Diego, CA, USA).
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bioRxiv - Molecular Biology 2023Quote: ... 50 μL of transposase mix with 2.5 μL of Tn5 transposase (Illumina, San Diego, CA) were added and incubated for 30 min at 37°C ...
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bioRxiv - Physiology 2020Quote: ... RNA-seq libraries were sequenced using paired-end reads (50-nt read 1 and 25-nt read 2) on a NextSeq 500 instrument (Illumina, San Diego, CA, USA). Obtained reads were mapped to the mouse GRCm38.p6 genome using STAR (version 2.7.3a) ...
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bioRxiv - Neuroscience 2021Quote: ... Libraries were pooled and loaded for clustering on 1 lane of a Single-read Illumina Flow cell (for an average of 50 million of reads per library) (Illumina, San Diego, CA, USA). Reads of 100 bases were generated using the TruSeq SBS chemistry on an Illumina HiSeq 4000 sequencer (Illumina ...
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bioRxiv - Neuroscience 2020Quote: ... Libraries were pooled and sequenced paired end (R1:26, R2:98 cycles) on a NextSeq 550 (Illumina) at 200 million reads per library.
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bioRxiv - Molecular Biology 2020Quote: ... and sequencing (Illumina sequencing single-reads, 1 × 50 bp) of the resulting input and IP samples performed by Fasteris (Geneva ...
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bioRxiv - Genomics 2022Quote: ... then sequenced (1×50 nt) with a HiSeq4000 (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... 50 bp sequencing was performed on an Illumina HiSeqV4 SR50 sequencer (Illumina, San Diego, CA, USA). After quality control of raw data with FastQC and removal of adapters and low-quality reads with Trimmomatic (version 0.36) ...
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bioRxiv - Genomics 2022Quote: ... The NovaSeq 6000 platform was used for paired-end (50 bp) sequencing (Illumina, San Diego, CA). Salmon62 was then used to quantify transcripts ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and sequenced at high-coverage (>50-fold) on the Illumina NovaSeq platform (Illumina, San Diego, CA, USA) (Supplementary Table S1).
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bioRxiv - Immunology 2024Quote: ... The 10nM library was denatured and further diluted before loading on a NovaSeq 6000 sequencing platform (v.1.5 chemistry, 28/98 bp paired-end, Illumina) at Novogene (Cambridge ...
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bioRxiv - Cancer Biology 2023Quote: ... Hyderabad using a 50-bp single-end reads Illumina NextSeq 500 Sequencer (Illumina Inc., San Diego, CA, USA). The data was generated by using the paired end approach of Illumina technique ...
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bioRxiv - Animal Behavior and Cognition 2022Quote: ... followed by 50 bp SE sequencing across eight lanes of a HiSeq 4000 (Illumina; San Diego, CA, USA).
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bioRxiv - Genomics 2021Quote: ... for 4000 cells was performed according to manufacturer’s instructions and the libraries were paired-end sequenced (R1:27, i7-index:8, R2:98) on HiSeq 4000 (Illumina). Preprocessing of scRNA-seq data ...
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bioRxiv - Genomics 2021Quote: ... Pelleted nuclei were resuspended in 50 μL transposition mix (25 μL 2x TD Buffer (Illumina (San Diego, CA, USA) 20034197) ...
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bioRxiv - Cancer Biology 2021Quote: ... The RNA was sequenced using single-end 50 bp reads on the Illumina HiSeq platform (Illumina, San Diego CA, USA). Raw sequence data were exported to FASTQ format and were filtered based on quality scores (Quality cutoff of 20 for at least 90% of the bases in the sequence) ...
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bioRxiv - Cell Biology 2022Quote: ... The libraries were sequenced as 50 X 2 paired end reads on an Illumina HiSeq 4000 (Illumina, San Diego, CA) using the HiSeq Control Software HD 3.4.0.38 collection software ...
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bioRxiv - Genomics 2021Quote: ... Samples underwent library preparation and 50 bp single end (SE) NGS sequencing using an Illumina HiSeq2000 (Illumina, San Diego CA) at the USC Epigenome Center (USC ...
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bioRxiv - Plant Biology 2024Quote: ... Sequencing was carried out with 50 bp single-end reads on an Illumina HiSeq 2500 (Illumina, San Diego, CA, USA). CleaveLand 3.0 and TargetFinder 50 were employed to identify potential sliced targets of known miRNAs.
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bioRxiv - Genomics 2024Quote: ... cells were resuspended in 50 µL ATAC Reaction mix (1 µL Tn5 (Illumina), 6 µL H2O ...
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bioRxiv - Molecular Biology 2022Quote: ... and then run by using paired-end 50 bp sequencing on the Illumina HiSeq 4000 platform (Illumina, San Diego, CA, USA). 10,000 cells were targeted for each sample with a sequencing depth of 20,000 read pairs per cell.
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bioRxiv - Plant Biology 2024Quote: ... and then sequenced on half lane NovaSeq 6000 using the paired-end 2×50 cycle chemistry (Illumina, San Diego, CA, USA). Data is deposited under accession number PRJEB60373.
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bioRxiv - Developmental Biology 2024Quote: ... Transposition was performed using the Fast-ATAC protocol (98) with the following changes: 2 µl of Tn5 transposase (TDE1 from Illumina FC-121-1030) was used in the transposition reaction and the reactions were incubated at 37 °C in a shaking water bath for 35 minutes ...
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bioRxiv - Genomics 2021Quote: ... Libraries were multiplexed and sequenced on an Illumina HiSeq 2500 for 50 bp single reads according to the manufacturer’s instructions (Illumina, San Diego, CA). Samples were first sequenced until ∼2M reads and continued to a total of ∼20M reads only when the fraction of reads that passed the LpnPI filter (explained below ...
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bioRxiv - Developmental Biology 2020Quote: ... The resulting crude nuclear pellet was then resuspended in 50 ul of tagmentation solution (1x TD buffer (Illumina, San Diego, CA 20034197), 33% PBS ...
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bioRxiv - Cell Biology 2021Quote: ... using NextSeq 500 (2×75 bp) and HiSeq 4000 (1×50 bp) equipment (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... Samples were sequenced single-end (1 × 50 bp) on the HiSeq 2500 platform (Illumina) or paired-end (2 × 100 bp ...
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bioRxiv - Genomics 2020Quote: ... Plasma and tumor DNA libraries were sequenced using paired-end 50 bp reads generated on the NovaSeq 6000 Sequencing System (Illumina, San Diego, CA).
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bioRxiv - Molecular Biology 2022Quote: ... RIP-seq libraries were pooled and sequenced on a MiSeq 50 base pair single-read flow cell using v2 reagents (Illumina, San Diego, CA). SIR libraries were also pooled and sequenced on either a HiSeq2500 high output 100 base pair paired-end flow cell using TruSeq SBS v3 reagents or on a NextSeq500 high output 75 base pair single-read flow cell using v2 reagents (Illumina ...
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bioRxiv - Genomics 2023Quote: ... RNA sequencing was performed at the Estonian Genome Centre Core Facility using paired-end 50-bp sequencing technology (Illumina, San Diego, CA, USA), according to the manufacturer’s specifications.
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bioRxiv - Microbiology 2023Quote: ... Resulting libraries were sequenced as 28/10/10/50 base reads on the NovaSeq instrument using the S2 Reagent kit in paired-end mode (Illumina, San Diego, CA). Fastq files were processed with Spaceranger-1.4.2 pipeline ...
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bioRxiv - Plant Biology 2024Quote: ... Samples were sequenced on a single run of a HiSeq 2000 as 50 nucleotide single-end reads on an Illumina HiSeq 200 (Illumina, San Diego, CA) at the University of Minnesota BioMedical Genomics Center resulting in an average of 8700000 reads per sample ...
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bioRxiv - Biochemistry 2022Quote: ... PCR amplicons were generated from the plasmids using primer pairs oKAC1589/oKAC1590 (for the catalytic domain) or oKAC1591/oKAC1592 (for the PI domain) and sequenced on a MiSeq (Illumina) to a depth of 12,378 and 409,221 reads for the catalytic and PI domain libraries ...
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bioRxiv - Developmental Biology 2022Quote: ... 50 µl TDE (Illumina), 0.01% digitonin ...
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bioRxiv - Cell Biology 2020Quote: ... Single-end sequencing was performed on an Illumina HiSeq2000 instrument using the TruSeq SBS Kit HS-v3 (50-cycle) (Illumina, San Diego, CA, US).
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bioRxiv - Genomics 2020Quote: ... and 50 base pair (bp) single-end (SE) sequencing was performed on a single lane of a HiSeq 4000 (Illumina; San Diego, CA, USA).
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bioRxiv - Systems Biology 2020Quote: RNAseq was performed by the Weill Cornell Epigenomics Core using a HiSeq 4000 system with 50 bp single end reads (Illumina, San Diego, CA, USA). To make libraries for RNAseq ...
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bioRxiv - Plant Biology 2020Quote: ... Nextera Flex library preparation was performed using 50-100 ng of dsDNA according to Nextera DNA Flex Library Prep Reference Guide (Illumina, San Diego, CA, USA) with the following modifications ...
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bioRxiv - Developmental Biology 2021Quote: Whole-genome amplified products were normalized to 150 ng/μL (single cells and sibling embryos) or 50 ng/μL (bulk parental DNA) before downstream processing with the Infinium HD assay super protocol (Illumina, San Diego, CA, US). Single-cell ...
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bioRxiv - Systems Biology 2022Quote: ... single reads and 7 bases index read on an Illumina HiSeq300 instrument using the TruSeq SBS Kit HS-v3 (50-cycle) (FC-401-3002, Illumina Inc, San Diego, CA).
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bioRxiv - Genomics 2023Quote: ... RNA-seq with 50 bp reads was conducted at the University of Delaware on an Illumina genome sequencer (Illumina, Inc., San Diego, CA, USA). The data were viewed for initial quality through FastQC (v0.11.7) ...
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bioRxiv - Genomics 2023Quote: ... The cDNA library was constructed with 50 μg RNA from each sample using the VAHTS mRNA-seq v2 Library Prep Kit (Illumina, San Diego, CA, USA). The libraries were sequenced to generate 150 bp paired-end RNA-seq reads by Biomarker Technologies Corporation (Beijing ...
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing was performed by the NIDDK Genomics Core facility using a MiSeq system with the single-end 50 bp Sequencing Kit (Illumina, San Diego, CA, USA). Sequence reads were mapped to the reference genome (NC_000913.3 ...