Labshake search
Citations for Illumina :
201 - 250 of 492 citations for Mouse IgG1 Isotype Control Antibody 15H6 since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2021Quote: ... four human CNV membranes and four human RPE-choroidal control tissues) were sequenced on the NextSeq 500 (Illumina) with 1 × 75 bp ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Image analysis was performed by HiSeq Control Software and base calling by the RTA software provided by Illumina. The output of each run can be found in Table S3 ...
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bioRxiv - Bioengineering 2021Quote: ... 570 μL of denatured library DNA and 30 μL of denatured PhiX control library (Illumina, FC-110-3001) were mixed ...
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bioRxiv - Plant Biology 2021Quote: ... and 18 libraries of control samples) were sequenced using Illumina HiSeq 2000 (Illumina Inc., San Diego, CA, USA).
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bioRxiv - Microbiology 2020Quote: ... to a final concentration of 2 nM containing 15% PhiX V3 library control (Illumina, San Diego, CA, USA), the library pools were denatured for 5 min in an equal volume of 0.2M NaOH ...
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bioRxiv - Physiology 2021Quote: ... and further hybridized to MouseRef-8 v2.0 Gene Expression BeadChips and read on a IScan System using the IScan control software Version 3.5.31 (Illumina). Microarray data were analyzed by Illumina Genomestudio software (v2011.1) ...
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bioRxiv - Genomics 2021Quote: Base calls were performed by the instrument control software and further processed using the Offline Base Caller (Illumina) v ...
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bioRxiv - Genomics 2021Quote: ... Base calls were performed by the instrument control software and further processed using the Offline Base Caller version 1.9.4 (Illumina). Samples were mapped with STAR version 2.6.1a44 to the mouse genome release mm10 ...
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bioRxiv - Microbiology 2021Quote: ... MiSeq data were processed with MiSeq control software v2.4.0.4 and MiSeq Reporter v2.4 (Illumina, San Diego, CA, USA). The resulting fastq files were filtered using TrimGalore v0.4.0 (https://github.com/FelixKrueger/TrimGalore) ...
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bioRxiv - Immunology 2022Quote: ... Multiplexed libraries were sequenced with 1% PhiX control library on the Illumina NextSeq 500 per manufacturer’s protocol (Illumina, Read 1 ...
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bioRxiv - Genomics 2021Quote: ... Each sample library was uniquely barcoded and quantified by qPCR using a PhiX Control (Illumina, FC-110-3001) standard curve ...
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bioRxiv - Cell Biology 2021Quote: ... libraries from control or Atx2 RNAi 3rd instar larvae brains were prepared using TruSeq stranded mRNA kit (Illumina). 3 control and 3 Atx2 RNAi libraries were prepared ...
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bioRxiv - Molecular Biology 2021Quote: ... Purified m6A-seq libraries were sequenced on an Illumina MiSeq platform with 10-20% PhiX control library (Illumina). The data is deposited in the Gene Expression Omnibus (GEO ...
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bioRxiv - Synthetic Biology 2023Quote: The sequencing libraries were mixed with 20–30% of PhiX spike-in DNA control (Illumina #FC-110-3001) for better cluster generation on the flow cell and sequenced by Illumina MiSeq (MiSeq v3 150-cycles kit #MS-102-3001 or 300-cycles kit #MS-102-3003) ...
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bioRxiv - Genetics 2023Quote: ... assuming up to 0.1% Indels in the paired control sample (which is typical for Illumina sequencing background frequency). This method allows more rigorous coverage sufficiency assessment than an arbitrary read threshold while accounting for relationships within the two treatment groups and the paired samples for each donor.
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bioRxiv - Physiology 2023Quote: Image analyses and base calling were performed using the NovaSeq Control Software and Real-Time Analysis component (Illumina). Demultiplexing was performed using Illumina’s conversion software (bcl2fastq 2.20) ...
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bioRxiv - Plant Biology 2024Quote: ... The final pool was run at 750 pM with 2% PhiX control library on a NextSeq 2000 (Illumina) with a P3 300 cycle kit ...
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bioRxiv - Microbiology 2024Quote: ... Image analysis and base calling were carried out using the HiSeq Control Software (HCS)+OLB+GAPipeline-1.6 (Illumina).
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bioRxiv - Cell Biology 2024Quote: ... ChIP’d DNA and IgG controls for peak calling were prepared and sequenced using the NovaSeq 6000 platform (Illumina) as 150bp paired-end reads by Novogene Bioinformatics Technology Co. ...
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bioRxiv - Immunology 2023Quote: ... For Infinium Mouse Methylation BeadChip (Illumina) arrays ...
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bioRxiv - Systems Biology 2024Quote: ... in two growth media conditions (CMAF and Basal)—were profiled by Illumina BeadArrays (mouse WG-6 v2, Illumina). Poor quality profiles were removed ...
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bioRxiv - Systems Biology 2024Quote: ... Illumina BeadArrays (mouse WG-6, Illumina) were used to profile the transcriptome of 33 independent EpiSC samples ...
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bioRxiv - Cell Biology 2019Quote: All the four samples (input controls two and H1t ChIP two samples - the raw Illumina sequenced files in FASTQ) were quality checked with FastQC (version 0.11.5) ...
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bioRxiv - Microbiology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003). The Mi-Seq separates all sequencing data by sample during post-run processing using recognised barcoded indices to generate FASTAQ files ...
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bioRxiv - Molecular Biology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003). The MiSeq separated all sequences by sample during post-run processing by recognised indices and to generate FASTQ files.
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bioRxiv - Physiology 2020Quote: Sequencing of the library was performed at a final concentration of 1.8 pM and with a 1 % PhiX v3 control library spike-in (Illumina) on the NextSeq500 sequencing system (Illumina) ...
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bioRxiv - Evolutionary Biology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003).
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bioRxiv - Microbiology 2019Quote: ... Equal concentrations of each sample were pooled and sequenced on an Illumina MiSeq at The University of Queensland’s Institute for Molecular Biosciences (UQ, IMB) using 30% PhiX Control v3 (Illumina) and a MiSeq Reagent Kit v3 (600 cycle ...
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bioRxiv - Cell Biology 2021Quote: Image analyses and base calling were performed using the NovaSeq Control Software and the Real-Time Analysis component (Illumina). Demultiplexing was performed using the 10X Genomics software Cellranger mkfastq (v3.1.0 for experiment 1 and v6.0.1 for experiment 2) ...
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bioRxiv - Microbiology 2021Quote: ... image analysis and base calling were conducted by HiSeq Control Software (HCS) + Off-Line Basecaller (OLB) + GAPipeline-1.6 (Illumina) on the HiSeq instrument ...
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bioRxiv - Microbiology 2021Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument at the Boston University microarray and sequencing core according to Illumina and 10x Genomics guidelines with 1.4-1.8pM input and 1% PhiX control library spike-in (Illumina, USA).
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bioRxiv - Pathology 2022Quote: ... Finally, the libraries of multiplexes (control, 5 samples; schizophrenia, 10 samples) were pooled and analyzed using Illumina HiSeq1500 (Illumina).
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bioRxiv - Evolutionary Biology 2022Quote: ... PA01:WTA4 and PA01:ΔintA4) and the pooled controls were first sequenced on the NextSeq 500 sequencing system (Illumina). Five PA01:WTA4 populations as well as the ancestral strains were contaminated by phages during the DNA extraction process and were re-extracted and re-sequenced alongside the remaining PA01:ΔintA4 populations (14 populations ...
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bioRxiv - Evolutionary Biology 2019Quote: ... Image analysis was performed with the HiSeq Control Software and base calling with the RTA software provided by Illumina.
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bioRxiv - Microbiology 2020Quote: ... The library preparation and quality control were performed according to manufacturer’s protocol and sequenced on a NextSeq 500 sequencer (Illumina).
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bioRxiv - Molecular Biology 2020Quote: ... 120 μl pooled 20 pM library and 15 μl denatured 20 pM PhiX control library (Illumina, FC-110-3001) after a 2 minute heat treatment at 96 °C followed by a 5 min incubation on ice ...
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bioRxiv - Genomics 2021Quote: ... Each sample library was uniquely barcoded and quantified by qPCR using a PhiX Control v3 (Illumina, FC-110-3001) standard curve ...
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bioRxiv - Genomics 2021Quote: ... Raw sequencing reads on FASTQ files were submitted to base quality control and mapped to human reference genome GRCh37/hg19 utilizing the MiSeq Reporter software (MSR, v2.6, Illumina). Variant calling was executed using two algorithms ...
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bioRxiv - Genetics 2019Quote: The second GWAS comprised 300 cases and 300 controls and was also carried out using genotyping with the CoreExome-24 v1.2 (Illumina). The total number of samples was reduced to 286 cases and 287 controls after applying QC procedures identical to the first GWAS ...
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bioRxiv - Physiology 2023Quote: Image analyses and base calling were performed using NovaSeq Control Software and the Real-Time Analysis component (Illumina, USA). Demultiplexing was performed using Illumina’s conversion software (bcl2fastq 2.20) ...
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bioRxiv - Plant Biology 2023Quote: ... The library was diluted to 0.5 nM with EB in 18 μL and spiked with 1% PhiX Control v3 (Illumina) before being prepared for loading using a NovaSeq XP 2 lane kit v1.5 (20043130 ...
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bioRxiv - Pathology 2023Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument according to Illumina and 10X Genomics guidelines with 1.4–1.8 pM input and 1% PhiX control library spike-in (Illumina, USA). Sequencing data were processed using 10X Genomics’ Cell Ranger pipeline to generate feature/barcode matrices from raw count data.
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bioRxiv - Immunology 2023Quote: Quality control (QC length profiling and concentration using RiboGreen) and library preparation (TruSeq stranded mRNA HT Kit by Illumina) were performed by the Genomics Core Facility of the University Basel ...
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bioRxiv - Genomics 2023Quote: ... Image analyses and base calling were performed using the Miniseq Control Software and the Real-Time Analysis component (Illumina). Demultiplexing was performed using Illumina’s conversion software (bcl2fastq 2.20.0.422) ...
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bioRxiv - Genomics 2023Quote: ... using the single read 100 nt protocol on 1 lane of a flow cell SP.Image analyses and base calling were performed using the Miniseq Control Software and the Real-Time Analysis component (Illumina). Demultiplexing was performed using Illumina’s conversion software (bcl2fastq 2.20.0.422) ...
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bioRxiv - Immunology 2023Quote: ... The BCR library preparation and quality control were performed according to the manufacturer’s protocol and sequenced on the NovaSeq PE150 platform (Illumina).
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bioRxiv - Genetics 2023Quote: ... The assignments of genotypes and primary quality control were conducted using the Genotyping module of the GenomeStudio software (Illumina). The data was filtered using the following thresholds (the primary quality control) ...
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bioRxiv - Cancer Biology 2023Quote: ... (iii) experimental design different from case-control and (iv) methylation profiling platform other than Infinium HumanMethylation450 BeadChip from Illumina. The study platform was chosen for its high resolution - around 450,000 methylation sites - and its wide acceptance in the field [19].
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bioRxiv - Genomics 2023Quote: ... the proportion of the scifi-ATAC-seq library in a lane should be less than 50% or extra spike-in library (e.g., PhiX control from Illumina) should be added to the lane.
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Resolution of SARS-CoV-2 infection in human lung tissues is driven by extravascular CD163+ monocytesbioRxiv - Immunology 2024Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument at the Boston University microarray and sequencing core according to Illumina and 10x Genomics guidelines with 1.4-1.8pM input and 1% PhiX control library spike-in (Illumina, USA).