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Citations for Illumina :
201 - 250 of 546 citations for Mouse Anti Human Papilloma virus types 16 18 716 281 since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2020Quote: Illumina library preparation followed a modification of the Illumina 16S metagenomic protocol (Illumina #15044223 Rev. B) where all loci specific primers have a 33 bp tail added to the 5’ end ...
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bioRxiv - Microbiology 2020Quote: ... The 16S rDNA V4 region was amplified by PCR and sequenced on the MiSeq platform (Illumina) using the 2×250 bp paired-end protocol yielding pair-end reads that overlap almost completely ...
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bioRxiv - Microbiology 2020Quote: ... 16S rRNA gene barcoding was performed with Illumina MiSeq (reagent kit v3; Illumina, San Diego, CA) by the University of Minnesota Genomics Center (Minneapolis ...
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bioRxiv - Microbiology 2023Quote: We prepared and sequenced 16S rRNA gene fragments libraries and sequenced them on MiSeq (Illumina, CA) at CMIT NCU as described earlier [30] with modifications allowing a decrease of host rRNA amplification (details in the Supplementary Methods SM5).
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bioRxiv - Microbiology 2023Quote: We utilized previously published 16S rRNA gene V4 and V3-V4 amplicon sequencing data (Illumina technology) of WG and ZHG fecal samples obtained by Campbell et al ...
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bioRxiv - Microbiology 2024Quote: ... the 16S rRNA gene V3 region was amplified using the Nextera Index Kit (Illumina, CA, USA) compatible forward primer nxt388_F:(5’-TCGTCGGCAG CGTCAGATGT GTATAAGAGA CAGACWCCTA CGGGWGGCAGCAG-3’ ...
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bioRxiv - Microbiology 2020Quote: ... At Gdansk two independent protocols were used for SARS-CoV-2 genome sequencing: Illumina RNA prep with enrichment for respiratory virus oligos panel V2 followed by Illumina MiniSeq medium output run that produced 150-nucleotide paired-end reads ...
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bioRxiv - Immunology 2022Quote: Identity of virus stocks were confirmed by next-generation sequencing using a MiniSeq platform (Illumina, Inc; San Diego, CA, USA). RNA was purified from Trizol-inactivated material using a Direct-zol RNA Miniprep kit (Zymo Research ...
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bioRxiv - Pathology 2020Quote: Library preparation for NHBE samples infected with influenza A virus (IAV) was performed using the TruSeq Stranded mRNA Library Prep Kit (Illumina) with Poly-A enrichment ...
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bioRxiv - Microbiology 2022Quote: ... Passage 1 virus stocks were further produced in Vero TMPRSS2 cells and the presence of mutations was confirmed by Illumina sequencing ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were generated for three separate plants for each virus Libraries were sequenced (single-end, 75 nt) using an NextSeq 500 platform (Illumina).
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bioRxiv - Genomics 2021Quote: ... four human CNV membranes and four human RPE-choroidal control tissues) were sequenced on the NextSeq 500 (Illumina) with 1 × 75 bp ...
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bioRxiv - Molecular Biology 2021Quote: ... index primers compatible with the Nextera XT Index Kit v2 were used (namely, N7xx - 26 possible variants and S5xx - 18 variants, for more details see Illumina Adapter Sequences ...
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bioRxiv - Molecular Biology 2020Quote: ... The sequencing pool was adjusted to a final concentration of 11.5 pM (for V2 kits) or 18 pM (for V3 kits) and sequenced in a MiSeq system (Illumina, USA), using the standard Illumina primers provided by the manufacturer kit ...
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bioRxiv - Neuroscience 2019Quote: ... #PN-120237) with 18 cDNA pre-amplification cycles and sequencing on one high-output lane of the NextSeq 500 (Illumina).
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bioRxiv - Systems Biology 2020Quote: ... modified universal primers S-D-Bact-0909-a-S-18 and S-*-Univ-*- 1392-a-A-15 (ref.46) and Nextera XT Index Kit V2 (Illumina) were used along with Q5 Hot Start High-Fidelity 2x Master Mix (New England Biolabs ...
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bioRxiv - Cell Biology 2022Quote: ... RNA library was constructed with 10x-Genomics Single Cell 3’ RNA sequencing kit v3 as previously described(18) sequenced using a NextSeq500 (Illumina). Cell clusters were characterized using an automated annotation tool(19 ...
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bioRxiv - Neuroscience 2021Quote: ... Libraries were then pooled and sequenced in 18 runs with the NextSeq 500 using the high output flow cell (Illumina), pooling 3,000 to 12,000 cells per sequencing run ...
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bioRxiv - Microbiology 2020Quote: ... The libraries pools were adjusted to a final concentration of 11.5 pM (for V2 kits) or 18 pM (for V3 kits) and sequenced in a MiSeq system (Illumina, USA), using the standard Illumina primers provided in the manufacturer kit ...
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bioRxiv - Immunology 2020Quote: ... 18 libraries were prepared for dual index paired-end sequencing on a HiSeq 2500 using a high-output kit (Illumina) at an average sequencing depth of 38.6e6 reads per library with > 93% of bases exceeding a quality score of 30 ...
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bioRxiv - Cancer Biology 2020Quote: Capture-based next-generation DNA sequencing for cases with sufficient material (n=18) was performed on a NextSeq 500 instrument (Illumina) as previously described13 using a custom brain tumor panel covering the entire coding and selected intronic and promoter regions of 130 or 160 genes of particular relevance in central nervous system tumors ...
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bioRxiv - Genomics 2020Quote: ... The first type consists of Labyrinthula transcripts generated in this study by sequencing (Illumina) and assembling the transcriptome (Haas et al ...
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bioRxiv - Genetics 2022Quote: DMDSC genotyping was conducted for approximately 5,801 patients with type 2 diabetes by Illumina using the global screening arrays version (GSA v1.0) ...
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Alzheimer’s patient brain myeloid cells exhibit enhanced aging and unique transcriptional activationbioRxiv - Neuroscience 2019Quote: ... The libraries were multiplexed within cell types and then sequenced on Illumina HiSeq2500 (Illumina) to generate 50M of single end 50bp reads.
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bioRxiv - Genomics 2021Quote: BD Infinium Human Methylation 450 arrays (Illumina) were retrieved from the European Genome-phenome Archive (EGA ...
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bioRxiv - Molecular Biology 2020Quote: ... Human Ribo-Zero rRNA depletion kit (Illumina). Paired-end 150+150 bp sequencing was done with Illumina NextSeq 500 using NextSeq 500/550 High Output Kit v2.5 for HeLa samples and with Illumina NovaSeq 6000 using partial S4 flow cell lane for patient samples.
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bioRxiv - Neuroscience 2022Quote: ... A Human OmniExpress v1.2 BeadChip array (Illumina) was used post-editing to check for any gross karyotype abnormalities ...
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bioRxiv - Molecular Biology 2023Quote: ... Human Ribo-Zero rRNA depletion kit (Illumina). Paired-end 150+150 bp sequencing was performed at the Institute for Molecular Medicine Finland FIMM Genomics unit with Illumina NovaSeq 6000 using partial S4 flow cell lane ...
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bioRxiv - Genomics 2021Quote: ... DNA fragments of the SARS CoV-2 genome were hybridized with biotinylated respiratory virus oligos (Illumina Inc., San Diego, CA, USA). The DNA fragments hybridized with the custom oligos were captured using streptavidin magnetic beads ...
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bioRxiv - Microbiology 2023Quote: The whole genome sequence of the mink-derived H5N1 clade 2.3.4.4b virus was determined using the Illumina MiSeq sequencing platform (Illumina, San Diego, CA, USA). Briefly ...
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bioRxiv - Microbiology 2021Quote: Amplicon library was prepared following the 16S metagenomic sequencing library preparation protocol (Illumina, San Diego, CA, USA). Purification was performed using AMPure XP system (Beckman Coulter Genomics ...
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bioRxiv - Genomics 2022Quote: Meta 16S short-read information of the V3V4 region was acquired from each environmental sample by Illumina MiSeq 300 cycle paired-end sequencing ...
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bioRxiv - Evolutionary Biology 2022Quote: ... and run on three lanes (16 samples/lane) on an Illumina HiSeq 3000 (Illumina, San Diego, USA), producing paired end reads with a default insert size of 350 bp and read lengths of 150 bp ...
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bioRxiv - Microbiology 2019Quote: ... All three datasets investigated the V4 region of the 16S rRNA gene and were sequenced by Illumina MiSeq ...
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bioRxiv - Bioengineering 2019Quote: ... The dsDNA pools were processed as described in the 16S Metagenomic Sequencing Library Preparation protocol (Illumina, USA). Briefly ...
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bioRxiv - Synthetic Biology 2021Quote: ... These dsDNA pools were processed as described in the 16S Metagenomic Sequencing Library preparation protocol (Illumina, USA) (Illumina 2013) ...
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bioRxiv - Microbiology 2020Quote: ... after 16S and 23S rRNA removal with the Ribo-Zero rRNA Removal Kit for Bacteria (Illumina, USA).
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bioRxiv - Microbiology 2020Quote: ... both the protocols are based on an optimized Illumina 16S Metagenomic Sequencing Library Preparation protocol (Illumina, USA), a two-step process where the target region is PCR amplified with gene-specific primers and then indexing barcodes are added through a second round of amplification ...
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bioRxiv - Microbiology 2022Quote: ... using 2 × 300 bp paired-end libraries according to the “16S Metagenomic Sequencing Library Preparation protocol” (Illumina). Amplicons were subsequently processed into amplicon sequence variants using DADA2 ...
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bioRxiv - Immunology 2022Quote: ... Libraries with 16 unique dual indexes were pooled and sequenced on a NextSeq 500 benchtop sequencer (Illumina) using NextSeq 500 High Output v2 kit and 75-bp paired-end sequencing chemistry.
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bioRxiv - Evolutionary Biology 2023Quote: ... cDNA libraries were prepared according to the 16S Metagenomic Sequencing Library Preparation protocol (15044223 Rev. B, Illumina). Libraries were indexed using Nextera XT Index Kit (FC-131-1002/Illumina) ...
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bioRxiv - Animal Behavior and Cognition 2023Quote: ... The 16S rDNA V3-V4 region was amplified by PCR and sequenced in the HiSeq platform (Illumina). The raw reads were processed and clustered into Operational Taxonomic Units (OTUs ...
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bioRxiv - Evolutionary Biology 2023Quote: ... we constructed DNA libraries from 16 samples using an NEBNext Ultra II DNA Library Prep Kit (Illumina). The 15 libraries from branch tissues were sequenced on an Illumina HiSeqX Ten ...
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bioRxiv - Cancer Biology 2021Quote: ... The INA-6 cells were sequenced (18 million reads per sample) using the TruSeq Stranded mRNA library preparation kit from Illumina (#20020595) followed by 75bp single read sequencing on the Illumina Hiseq 4000 next machine ...
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bioRxiv - Cancer Biology 2022Quote: ... correction and normalization steps were performed using an improved version of the in-house developed pipeline using subset quantile normalization based on the relation to sequence annotation provided by Illumina (18). Probes were considered as differentially methylated if the absolute value of the difference between robust median ß- values in samples of each phenotypes was higher than 0.2 ...
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bioRxiv - Cancer Biology 2019Quote: DNA methylation data (Illumina human methylation 450k BeadChip) and clinical information of 8,118 patients across 24 tissue types were obtained from in GDC data portal [29] using TCGAbiolink (Bioconductor package ...
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bioRxiv - Genetics 2024Quote: The Infinium Human Methylation EPIC BeadChip (Illumina, USA) array was performed according to manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2024Quote: ... and Methylation data (Illumina Human Methylation 450 platform) for TCGA cohorts were downloaded from the Firebrowse website hosed by Broad Institute of MIT and Harvard ...
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bioRxiv - Genetics 2021Quote: Assemblies of the genomes of the 16-isolate panel generated by Moleculo technology (Illumina, San Diego, CA, USA) were obtained from Bloom ...
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bioRxiv - Genetics 2021Quote: ... Custom sequencing libraries were prepared as previously described (16) and sequencing was performed using a NextSeq system (Illumina). To filter for significantly enriched peptides ...