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Citations for Illumina :
301 - 350 of 423 citations for L lactate dehydrogenase B chain LDH B Human His since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2021Quote: ... Host ribosomal depletion was performed using a Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina). Paired-end transcriptome sequencing was generated on the HiSeq2500 platform (Illumina).
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Human CCR6+ Th cells show both an extended stable gradient of Th17 activity and imprinted plasticitybioRxiv - Immunology 2023Quote: ... and gene expression levels were determined using Illumina Human WG6 Expression BeadChip Version 3 arrays (Illumina Inc.) according to the manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2024Quote: ... Total RNA samples were treated with a Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina) and used for RNA-Seq library preparation using an Illumina TruSeq Stranded Total RNA Library Prep Kit (Illumina ...
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bioRxiv - Molecular Biology 2021Quote: ... The nuclei were pelleted and resuspended in 1x TD with 2.5 l TDE1 (Nextera DNA library prep kit, Illumina). These were incubated for 30 min at 37oC ...
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bioRxiv - Genetics 2020Quote: ... were incubated in a 50 µl reaction with 0.8 µl of Tn5 transposase at 1× TD buffer from the Nextera library preparation kit (Illumina) for 5 min at 55°C ...
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bioRxiv - Genetics 2020Quote: The phage L cI−40 13−am43 genome was sequenced at New England Biolabs by combining data from Illumina and PacBio RS2 methods ...
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bioRxiv - Developmental Biology 2024Quote: ... Pellets were resuspended in 50 µL of transposition reaction (2X TD buffer, 1X PBS, 0.1% Tween-20, 0.1% Digitonin, 5µL of Illumina Tn5 transposase) and incubated for 30 min at 37°C with 1,000 rpm agitation ...
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bioRxiv - Genetics 2021Quote: ... and iPSC-derived neural progenitor cells (NPC-FGF) was assessed using the Infinium Human Methylation EPIC BeadChip (Illumina), according to the manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2021Quote: ... Samples that met the Illumina TruSeq Stranded Total RNA (Human/Mouse/Rat) (Illumina Inc., San Diego, CA,USA) sample input guidelines were prepared according to the kits protocol ...
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bioRxiv - Molecular Biology 2020Quote: ... Reads were confirmed to be post-quality control by Prinseq and mapped to the human donor sequence (hCoV-19/Germany/BavPat1/2020|EPI_ISL_406862|2020-01-28) using BWA (Illumina) and Pomoxis mini_align (Minion) ...
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bioRxiv - Neuroscience 2019Quote: ... 332 cells from eight adult human brains (three males and five females) were collected and profiled by Illumina MiSeq and Illumina NextSeq 500 ...
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bioRxiv - Cancer Biology 2021Quote: ... RNAseq-based gene expression and methylation array data (either Illumina human methylation27K array, n = 15 genomes; or Illumina human methylation450K array ...
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bioRxiv - Genomics 2022Quote: ... the samples were applied following the Illumina Infinium Human Methylation DNA chip manufacturer protocols (Illumina, San Diego, CA). Chips were analyzed using the Illumina Hi-Scan system at the McDonnell Genome Institute (MGI ...
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bioRxiv - Neuroscience 2021Quote: ... 2 μg of total RNA were treated with the Ribo-Zero rRNA Removal Kit (Human/Mouse/Rat; Illumina). Depleted RNA was precipitated 1h at −80°C in three volumes of ethanol plus 1 μg of glycogen ...
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bioRxiv - Molecular Biology 2019Quote: ... Total RNA was depleted of ribosomal RNA using Ribo-Zero rRNA Removal Kit (Epicentre/Illumina, Human/Mouse/Rat) and library preparation was completed using NEBNext® Ultra Directional RNA Library Prep Kit for Illumina® (New England Biolabs) ...
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bioRxiv - Neuroscience 2021Quote: Analysis of pluripotency gene expression profile was performed using the Human-HT-12-v4 expression BeadChip Kit (Illumina) and subsequent Pluritest analysis ...
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bioRxiv - Molecular Biology 2021Quote: ... and stranded total RNA libraries were prepared using the TruSeq Stranded Total RNA Human/Mouse/Rat kit (Illumina), following manufacturer’s instructions.
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bioRxiv - Microbiology 2022Quote: ... Raw sequencing reads were aligned to the hg19 human genome with the Basespace RNA-Seq Aligment application (Illumina). GO-term enrichment was performed using Biojupies (44) ...
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bioRxiv - Cell Biology 2022Quote: We identified genes with significantly differential transcript levels following the RSEM-EBSeq workflow outlined at http://deweylab.github.io/RSEM and used the sequences and annotation of UCSC human genome v19 (hg19) from Illumina igenome ...
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bioRxiv - Microbiology 2022Quote: ... Ribosomal RNA was removed from total RNA using the Ribo Zero Gold for human/mouse/rat kit (Illumina). Using the TruSeq RNA Sample Library Preparation v.2 kit (Illumina) ...
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bioRxiv - Neuroscience 2022Quote: ... Pair-end reads of cDNA sequences were aligned back to the human genome (UCSC hg19 from Illumina iGenome) by the spliced read mapper TopHat (v2.0.4 ...
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bioRxiv - Molecular Biology 2023Quote: Raw count data of 2700 PBMCs (PBMCs from a health human donor, single cell immune profiling dataset by Cell Ranger 1.1.0 on Illumina NextSeq 500 with ∼69,000 reads per cell ...
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bioRxiv - Systems Biology 2022Quote: ... the alignment of RNA-seq reads against the human reference genome (NCBI build37.2, downloaded from iGenome of Illumina) was performed using TopHat2 (version 2.0.13 ...
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bioRxiv - Genomics 2023Quote: ... and stranded total RNA libraries were prepared using the TruSeq Stranded Total RNA Human/Mouse/Rat kit (Illumina), following manufacturer’s instructions.
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bioRxiv - Plant Biology 2020Quote: ... a 200 µL aliquot of RNA was treated with 50 units of nuclease provided by the ARTSeq/TruSeq Ribo Profile kit (Illumina) for an hour at 23°C on a nutator ...
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bioRxiv - Systems Biology 2020Quote: For library preparation up to 700 pg cDNA was desiccated and rehydrated in 1 µl Tagmentation mix (1x TruePrep Tagment Buffer L, 0.1 µl TruePrep Tagment Enzyme V50; from TruePrep DNA Library Prep Kit V2 for Illumina; Vazyme) and tagmented at 55°C for 5 min ...
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bioRxiv - Immunology 2021Quote: For library preparation up to 700 pg cDNA was desiccated and rehydrated in 1 µl Tagmentation mix (1x TruePrep Tagment Buffer L, 0.1 µl TruePrep Tagment Enzyme V50; from TruePrep DNA Library Prep Kit V2 for Illumina; Vazyme) and tagmented at 55°C for 5 min ...
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bioRxiv - Immunology 2021Quote: ... 1.5 ng cDNA was tagmented using 0.5 μl TruePrep Tagment Enzyme V50 and 1x TruePrep Tagment Buffer L (TruePrep DNA Library Prep Kit V2 for Illumina, Vazyme), followed by an incubation step at 55 °C for 10 min ...
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bioRxiv - Genomics 2021Quote: ... 37 μL of the products was diluted to 50 μL of standard Phusion polymerase reaction mix in GC buffer with 0.1 μM primer M1 (annealing to the Illumina PE1.0 primer) and one of indexing primers M2,3 ...
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bioRxiv - Molecular Biology 2021Quote: ... cDNA library construction using TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Human (Illumina #RS-122-2201) and sequencing on an Illumina NovaSeq6000 platform was performed by Macrogen (Tokyo ...
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bioRxiv - Genomics 2019Quote: ... followed by the removal of ribosomal RNA using a Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina). Strand-specific sequencing libraries were prepared using a NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (NEB) ...
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bioRxiv - Genomics 2019Quote: Placental DNAm from the fetal side was assessed with the Infinium Human-Methylation450 array (Illumina, San Diego, CA USA). See Supplementary Methods file for extra details on placenta collection ...
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bioRxiv - Genomics 2019Quote: ... RNA sequencing libraries were made using the TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat kit (Illumina) according to manufacturer instructions ...
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bioRxiv - Developmental Biology 2021Quote: RNA from sorted human and naked mole-rat populations was sequenced at ∼100 million reads on a HiSeq2500v4 (Illumina), the SMARTer® Ultra® Low RNA Kit (Takara ...
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bioRxiv - Neuroscience 2020Quote: ... nDNA was extracted from whole blood and genotyped on Illumina GWAS arrays for ADNI1 (Illumina Human 610-Quad BeadChip), ADNI GO/2 participants (Illumina HumanOmniExpress BeadChip) ...
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bioRxiv - Neuroscience 2019Quote: ... Genome integrity for iPSC lines and their corresponding fibroblasts was assessed using the Human OmniExpress24 array (∼700,000 markers, Illumina) and analysed using KaryoStudio software (Illumina).
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bioRxiv - Molecular Biology 2021Quote: ... The RNA- Seq library was prepared by the Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina, RZG1224) and TruSeq Stranded mRNA Library Prep Kit (Illumina ...
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bioRxiv - Microbiology 2020Quote: Raw reads were aligned to the human genome (hg19) using the RNA-Seq Aligment App on Basespace (Illumina, CA), following differential expression analysis using DESeq213 ...
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Naked Mole-Rat Hematopoietic Stem and Progenitors are Highly Quiescent with an Inherent Myeloid BiasbioRxiv - Cell Biology 2021Quote: RNA from sorted human and naked mole-rat populations was sequenced at ∼100 million reads on a HiSeq2500v4 (Illumina), the SMARTer® Ultra® Low RNA Kit (Takara ...
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Evolutionarily divergent mTOR remodels the translatome to drive rapid wound closure and regenerationbioRxiv - Developmental Biology 2021Quote: ... The libraries were prepared by the Stanford Genomic Services Center per manufacturer’s instructions using the TruSeq Stranded Total RNA Library Prep with Ribo-Zero Gold Human/Mouse/Rat (Illumina) and sequenced (PEx150 ...
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bioRxiv - Microbiology 2021Quote: ... Ribosomal reduction libraries were prepared with the Ribo-Zero Gold rRNA removal kit (human/mouse/rat) MRZG12324 (Illumina, USA) and sequenced at the Yale University Center of Genome Analysis (YCGA ...
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bioRxiv - Cell Biology 2020Quote: ... Trimmed reads were mapped to the National Cener for Biotechnology Information (NCBI) human reference genome (GRCh38) downloaded from Illumina iGenomes (http://igenomes.illumina.com.s3-website-us-east-1.amazonaws.com/Homo_sapiens/NCBI/GRCh38/Homo_sapiens_NCBI_GRCh38.ta r.gz ...
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bioRxiv - Molecular Biology 2021Quote: ... Depletion of ribosomal RNA was carried out solely by use of the RiboZero Gold Human/Mouse/Rat kit (Illumina). Adapter sequences were based on the TruSeq small RNA sequences (Illumina) ...
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bioRxiv - Microbiology 2020Quote: ... Raw reads were aligned to the human genome (hg19) using the RNA-Seq Aligment App on Basespace (Illumina, CA), following differential expression analysis using DESeq227 ...
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bioRxiv - Genetics 2019Quote: Genotyping was performed by 23andMe using the Illumina Infimum DNA Human OmniExpress-24 BeadChip V4 (Illumina, San Diego, CA). This genotyping platform consists of approximately 570,000 SNPs ...
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bioRxiv - Genomics 2021Quote: ... Raw sequencing reads on FASTQ files were submitted to base quality control and mapped to human reference genome GRCh37/hg19 utilizing the MiSeq Reporter software (MSR, v2.6, Illumina). Variant calling was executed using two algorithms ...
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bioRxiv - Neuroscience 2021Quote: ... Genome integrity and cell identity tracking was assessed using the Human CytoSNP-12v2.1 beadchip array or OmniExpress24 array (Illumina) on genomic DNA generated using the All-Prep kit (Qiagen ...
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bioRxiv - Genomics 2022Quote: ... RNA-seq libraries were prepared from 600 ng of total RNA (RNA integrity number (RIN) >8.0) with TruSeq Stranded Total RNA Human/Mouse/Rat kit (Illumina). For polysome immunoprecipitation experiments ...
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bioRxiv - Microbiology 2020Quote: Raw reads were aligned to the human genome (hg19) using the RNA-Seq Alignment App on Basespace (Illumina, CA). The top 2000 gene counts with the highest variance were log transformed and Z-score normalized ...
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bioRxiv - Cancer Biology 2023Quote: ... indexed libraries for human WGS were constructed from 1.0 μg of gDNA using the TruSeq DNA PCR-Free Library Prep Kit (Illumina) according to the manufacturer’s instructions ...