Labshake search
Citations for Illumina :
451 - 500 of 793 citations for Human Immunodeficiency Virus GP41 Protein HIV 1 Group O since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2022Quote: ... We partitioned the genes into three categories: (1) >5-fold higher in Illumina (“Higher count in Illumina”); (2 ...
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bioRxiv - Microbiology 2020Quote: ... cultures (Supplementary Table 1) using the Epicentre MasterPure DNA Purification kit (Illumina Biotechnology, San Diego, CA, USA) following the manufacturer’s protocol ...
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bioRxiv - Genomics 2021Quote: ... The libraries were PE150 sequenced on either HiSeqX (Liver nuclei batch 1) or a NovaSeq 6000 (Illumina). scnmC-Seq2 libraries were prepared according to the previously published protocol (Luo et al. ...
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bioRxiv - Developmental Biology 2021Quote: ... 1 ng of pre-amplified cDNA from an estimated 600 cells was tagmented by Nextera XT (Illumina) with a custom P5 primer (Integrated DNA Technologies) ...
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bioRxiv - Microbiology 2021Quote: ... rRNA depletion was conducted with 1 μg total RNA using Ribo-Zero rRNA Removal Kit Bacteria (Illumina), followed by library preparation with NEBNext Ultra Directional RNA Library Prep Kit for Illumina (New England Biolabs) ...
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bioRxiv - Cancer Biology 2019Quote: ... Pooled and diluted library were denatured along with 1% PhiX spike in as per recommendation from Illumina. Library was loaded onto the NextSeq 550 v2 mid-output 150 cycle kit.
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bioRxiv - Microbiology 2022Quote: ... and libraries prepared using the NexteraXT kit and sequenced using HiSeq 1 × 150-cycle v3 kit (Illumina). The operational taxonomic unit (OTU ...
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bioRxiv - Plant Biology 2022Quote: ... 1 µg of total RNA was used as input for the TruSeq sRNA Library Preparation kit (Illumina) as described in the TruSeq RNA Sample Preparation v2 Guide (Illumina) ...
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Autocrine Sfrp1 inhibits lung fibroblast invasion during transition to injury induced myofibroblastsbioRxiv - Cell Biology 2022Quote: ... 1 ng of pre-amplified cDNA from an estimated 1000 cells was tagmented by Nextera XT (Illumina) with a custom P5-primer (Integrated DNA Technologies) ...
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Transcriptional dissection of symptomatic profiles across the brain of men and women with depressionbioRxiv - Neuroscience 2023Quote: ... RNA libraries were synthesized from 1 μg of RNA using the ScriptSeq Complete Gold Kit (Epicentre, Illumina) including an initial ribosomal RNA depletion step ...
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bioRxiv - Neuroscience 2023Quote: ... Single read (1×75bp) sequencing was performed on the NextSeq 550 platform (Illumina Inc, SY-415-1002) using the NextSeq 500/550 High-Output v2.5 kit (20024906) ...
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bioRxiv - Cancer Biology 2023Quote: ... The quantified library pool was diluted to 1 nM and sequenced on MiniSeq (Illumina, FC-420-1001) to check for the quality of reads ...
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bioRxiv - Cancer Biology 2023Quote: ... Fixed cells were transposed using barcoded Tn5 (Seqwell) in a transposition buffer (1 × TD buffer from Illumina Nextera kit ...
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bioRxiv - Genomics 2023Quote: ... and used 1 ng for DNA library preparation using the Nextera XT DNA Library Preparation kit (Illumina), according to manufacturer’s protocol ...
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bioRxiv - Biochemistry 2023Quote: ... and the indexed libraries were prepared from 1 μg of purified RNA with TruSeq-stranded mRNA (Illumina) Library Prep Kit according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2023Quote: ... Libraries were prepared from 1 μg of RNA using the TruSeq Stranded mRNA library prep kit (Illumina) following the reference guide ...
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bioRxiv - Genomics 2023Quote: ... The libraries were then subjected to 1×75bp high-throughput sequencing using a NextSeq 500 instrument (Illumina). Reads were mapped to the Arabidopsis TAIR10 reference genome using STAR version 2.7.2b (32) ...
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bioRxiv - Neuroscience 2023Quote: ... and 1 ng of genomic DNA was used for constructing sequencing libraries with the NexteraXT Kit (Illumina). MagSi-NGSPREP Plus Beads (Steinbrenner Laborsysteme GmbH ...
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bioRxiv - Immunology 2024Quote: ... Beads were resuspended in 29 µL pre-warmed tagmentation buffer with 1 µL Tn5 transpose (Illumina, 20034197). Samples were incubated for 5 minutes with vigorous mixing at 1100 rpm at 37°C in a thermomixer ...
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bioRxiv - Microbiology 2024Quote: ... sequencing libraries were prepared from 1 µg of gDNA using the Illumina TruSeq DNA PCR free (Illumina) library preparation kit according to the manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2024Quote: ... DNA eluted and purified was sequenced (sequencing single-reads, 1 × 50 bp or paired-end 100bp; Illumina) of the resulting input and IP samples performed by BGI ...
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bioRxiv - Cell Biology 2020Quote: ... cDNA was tagmented in 5 technical replicates of 1 ng cDNA each using the Nextera XT Kit (Illumina), according to manufacturer’s instructions ...
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bioRxiv - Genetics 2021Quote: ... DNA libraries were prepared from 1 ng of genomic DNA using Nextera XT DNA Library Prep kits (Illumina) for low fluorescence bulks and for high fluorescence bulks (control populations were not sequenced) ...
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bioRxiv - Developmental Biology 2021Quote: ... cDNA libraries were synthetized from 1 µg of total RNA and sequenced using a HiSeq-3000 platform (Illumina) to obtain the 50 base pairs (bp ...
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bioRxiv - Genomics 2020Quote: ... sequencing libraries were prepared from 1 ng gDNA using the Nextera XT Library Preparation Kit v.3 (Illumina) and sequenced on the Illumina NextSeq system (paired end 2 x 150 bp insert size) ...
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bioRxiv - Evolutionary Biology 2020Quote: ... from 1 μg DNA using the TruSeq PCRfree DNA sample preparation kit (FC-121-3001/3002, Illumina Inc.) targeting an insert size of 350 bp as directed ...
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bioRxiv - Synthetic Biology 2020Quote: ... before multiplex pooling and single-end sequencing on a 1×75 flow cell on the NextSeq500 platform (Illumina). Total reads were 33 to 65 million per sample.
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bioRxiv - Microbiology 2019Quote: ... Genomic DNA of the strains CBC-1 and HTSH020 was sequenced in house on a MiSeq sequencer (Illumina) with 300 bp paired-end reads using PCR-free library preparation ...
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bioRxiv - Genetics 2021Quote: ... 1 µg of high quality total RNA sample (RIN >8) was processed using TruSeq Stranded mRNA kit (Illumina) according to manufacturer instructions ...
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bioRxiv - Genomics 2021Quote: ... We used one of the cohorts for our main analyses (AEMS450K1, Athero-Express Methylation Study Illumina 450K 1) and the other smaller cohort for replicating the effect size of methylation sex differences (AEMS450K2 ...
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bioRxiv - Cell Biology 2021Quote: ... cDNA was tagmented in 10 technical replicates of 1 ng cDNA each using the Nextera XT Kit (Illumina), according to the manufacturer’s instructions ...
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bioRxiv - Systems Biology 2021Quote: ... Samples were multiplexed and sequenced on two identical NextSeq500 lanes using high-output 1×75-bp chemistry (Illumina). The concatenated FASTQ files generated from Illumina were used as input to kallisto ...
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bioRxiv - Microbiology 2021Quote: ... Libraries were generated from 1 ng genomic DNA by using the Nextera XT DNA Library Prep Kit (Illumina). Sequencing was performed using a MiSeq Reagent Kit v3 cartridge (600-cycle kit ...
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bioRxiv - Cancer Biology 2022Quote: ... RNA-seq libraries were prepared from > 1 μg of total RNA using TruSeq RNA sample prep kit (Illumina) according to the manufacturers’ instructions.
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Adaptive translational pausing is a hallmark of the cellular response to severe environmental stressbioRxiv - Molecular Biology 2020Quote: ... 1 µg RNA was used to make libraries with TruSeq Stranded Total RNA Library Prep Gold (Illumina, 20020598) according to the manufacturer’s instructions ...
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bioRxiv - Immunology 2021Quote: ... Cells were then lysed and fragmented in a single reaction (12.5 µl 2X Illumina TDE buffer, 2.5 µl 1% Tween-20, 2.5 µl 0.2% Digitonin, 5 µl water, 2.5 µl Illumina TDE1 enzyme). Samples were incubated at 37°C for 60 minutes and purified using the Zymo DNA Clean and Concentrator-5 Kit (Zymo) ...
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bioRxiv - Immunology 2022Quote: ... Multiplexed libraries were sequenced with 1% PhiX control library on the Illumina NextSeq 500 per manufacturer’s protocol (Illumina, Read 1 ...
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bioRxiv - Cancer Biology 2019Quote: ... and homozygous sftb-1(cer6) larvae) were prepared using the TruSeq™ Stranded Total RNA kit protocol (Illumina). Briefly ...
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bioRxiv - Molecular Biology 2019Quote: ... 1 µg of total RNA was used to prepare libraries using the TruSeq Stranded mRNA-Seq kit (Illumina). Reads were aligned to TAIR10 using Tophat69 by allowing up to two mismatches and mapping only to one location ...
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bioRxiv - Microbiology 2020Quote: ... Sequencing libraries were prepared from 1 ng of DNA using the Nextera XT DNA Library Prep kit (Illumina) and libraries concentrations were normalised using bead normalisation as described by the manufacturer ...
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bioRxiv - Genomics 2019Quote: ... code at https://github.com/lh3/fermikit in precisionFDA app at https://precision.fda.gov/apps/app-BvJPP100469368x7QvJkKG9Y-1) with default settings from Illumina HiSeq 50x (downsampled to two flow cells ...
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bioRxiv - Genomics 2019Quote: ... 10% v/v dimethylformamide) containing 1 μl Tagment DNA Enzyme from the Nextera DNA Sample Prep Kit (Illumina) and incubated at 37°C for 10 min followed by 2x washing in RIPA-LS and TE (10mM Tris-HCL ...
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bioRxiv - Microbiology 2019Quote: ... The qPCR efficiency of the assay was calculated (FIG 2) using the following formula: Efficiency = 10[-1/Slope] (http://efficiency.gene-quantification.info/) by Illumina Eco Real-Time PCR system software ...
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bioRxiv - Microbiology 2021Quote: ... then 1 μg of RNA was used for library preparation with TruSeq Stranded mRNA Library Preparation Kit (Illumina) per the manufacturer’s instructions ...
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bioRxiv - Genetics 2021Quote: ... Sequences were demultiplexed using QIIME2 (core distribution 2018.6)42 for dataset 1 and BCL2FASTQ (Illumina, San Deigo, CA) for dataset 2 ...
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bioRxiv - Microbiology 2021Quote: ... each 1 μL of 10 μM forward and reverse primers from Nextera XT Index Kit v2 (Illumina, USA), 8 μL of nuclease-free water ...
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bioRxiv - Molecular Biology 2022Quote: ... Each library was sequenced in 1 × 75 bp of single read mode using a NextSeq 500 platform (Illumina). Adapter sequences are removed from sequencing reads using Trim Galore (version 0.6.7 ...
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bioRxiv - Microbiology 2022Quote: ... 2.5 µL primer P5 (5 µM) and 2.5 µL Index 1 primer (N7**, Illumina, CN FC-131-2001) was used for the PCR enrichment ...
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bioRxiv - Systems Biology 2022Quote: ... 1 ng of cDNA was “tagmented” and bar coded using a Nextera XT DNA Sample Preparation Kit (Illumina). The final libraries were purified using AmPure XP magnetic beads (Beckman Coulter ...
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bioRxiv - Molecular Biology 2023Quote: ... A 2 µl aliquot of the denatured library pool is then added to 1 ml of HT1 (Illumina), mixed and 120 µl is added to the ‘sample library’ cBot strip tube ...