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Citations for Illumina :
251 - 300 of 366 citations for FGH Esterase D Human His since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2022Quote: ... the samples were applied following the Illumina Infinium Human Methylation DNA chip manufacturer protocols (Illumina, San Diego, CA). Chips were analyzed using the Illumina Hi-Scan system at the McDonnell Genome Institute (MGI ...
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bioRxiv - Neuroscience 2021Quote: ... 2 μg of total RNA were treated with the Ribo-Zero rRNA Removal Kit (Human/Mouse/Rat; Illumina). Depleted RNA was precipitated 1h at −80°C in three volumes of ethanol plus 1 μg of glycogen ...
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bioRxiv - Molecular Biology 2019Quote: ... Total RNA was depleted of ribosomal RNA using Ribo-Zero rRNA Removal Kit (Epicentre/Illumina, Human/Mouse/Rat) and library preparation was completed using NEBNext® Ultra Directional RNA Library Prep Kit for Illumina® (New England Biolabs) ...
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bioRxiv - Neuroscience 2021Quote: Analysis of pluripotency gene expression profile was performed using the Human-HT-12-v4 expression BeadChip Kit (Illumina) and subsequent Pluritest analysis ...
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bioRxiv - Molecular Biology 2021Quote: ... and stranded total RNA libraries were prepared using the TruSeq Stranded Total RNA Human/Mouse/Rat kit (Illumina), following manufacturer’s instructions.
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bioRxiv - Microbiology 2022Quote: ... Raw sequencing reads were aligned to the hg19 human genome with the Basespace RNA-Seq Aligment application (Illumina). GO-term enrichment was performed using Biojupies (44) ...
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bioRxiv - Cell Biology 2022Quote: We identified genes with significantly differential transcript levels following the RSEM-EBSeq workflow outlined at http://deweylab.github.io/RSEM and used the sequences and annotation of UCSC human genome v19 (hg19) from Illumina igenome ...
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bioRxiv - Microbiology 2022Quote: ... Ribosomal RNA was removed from total RNA using the Ribo Zero Gold for human/mouse/rat kit (Illumina). Using the TruSeq RNA Sample Library Preparation v.2 kit (Illumina) ...
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bioRxiv - Neuroscience 2022Quote: ... Pair-end reads of cDNA sequences were aligned back to the human genome (UCSC hg19 from Illumina iGenome) by the spliced read mapper TopHat (v2.0.4 ...
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bioRxiv - Systems Biology 2022Quote: ... the alignment of RNA-seq reads against the human reference genome (NCBI build37.2, downloaded from iGenome of Illumina) was performed using TopHat2 (version 2.0.13 ...
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bioRxiv - Molecular Biology 2023Quote: Raw count data of 2700 PBMCs (PBMCs from a health human donor, single cell immune profiling dataset by Cell Ranger 1.1.0 on Illumina NextSeq 500 with ∼69,000 reads per cell ...
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bioRxiv - Genomics 2023Quote: ... and stranded total RNA libraries were prepared using the TruSeq Stranded Total RNA Human/Mouse/Rat kit (Illumina), following manufacturer’s instructions.
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bioRxiv - Microbiology 2019Quote: ... Illumina barcodes and adapters were attached to pooled and purified products in a second PCR (8 cycles) with the Nextera XT Index Kit A and D (Illumina Inc.). Libraries were purified with Agencourt AMPure XP kit (Beckman coulter ...
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Impairment of a distinct cancer-associated fibroblast population limits tumour growth and metastasisbioRxiv - Cancer Biology 2020Quote: ... mice were injected intraperitoneally with 150 mg kg−1 D-luciferin (Caliper Life Sciences) in 100 μL and mice imaged in vivo using an IVIS imaging chamber (IVIS Illumina II). Luminescence measurements (photons/second/cm2 ...
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bioRxiv - Immunology 2022Quote: ... and the V(D)J library was sequenced with NextSeq 500/550 Mid Output Kit v2.5 (300 Cycles) (Illumina, cat. 20024905).
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bioRxiv - Pharmacology and Toxicology 2023Quote: ... and dual-indexed with Nextera XT Index Kit V2 Sets A-D (FC-131-2001, FC-131-2002, FC-131-2003, FC-131-2004, Illumina, USA) according to the manufacturer’s recommendations ...
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bioRxiv - Cancer Biology 2023Quote: Mice were injected intraperitoneally with 150 mg kg-1 D-luciferin (Caliper Life Sciences) in 100 μL and mice imaged in vivo using an IVIS imaging chamber (IVIS Illumina II). Luminescence measurements (photons per second per cm2 ...
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bioRxiv - Molecular Biology 2021Quote: ... cDNA library construction using TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Human (Illumina #RS-122-2201) and sequencing on an Illumina NovaSeq6000 platform was performed by Macrogen (Tokyo ...
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bioRxiv - Genomics 2019Quote: ... followed by the removal of ribosomal RNA using a Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina). Strand-specific sequencing libraries were prepared using a NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (NEB) ...
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bioRxiv - Genomics 2019Quote: Placental DNAm from the fetal side was assessed with the Infinium Human-Methylation450 array (Illumina, San Diego, CA USA). See Supplementary Methods file for extra details on placenta collection ...
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bioRxiv - Genomics 2019Quote: ... RNA sequencing libraries were made using the TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat kit (Illumina) according to manufacturer instructions ...
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bioRxiv - Developmental Biology 2021Quote: RNA from sorted human and naked mole-rat populations was sequenced at ∼100 million reads on a HiSeq2500v4 (Illumina), the SMARTer® Ultra® Low RNA Kit (Takara ...
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bioRxiv - Neuroscience 2020Quote: ... nDNA was extracted from whole blood and genotyped on Illumina GWAS arrays for ADNI1 (Illumina Human 610-Quad BeadChip), ADNI GO/2 participants (Illumina HumanOmniExpress BeadChip) ...
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bioRxiv - Neuroscience 2019Quote: ... Genome integrity for iPSC lines and their corresponding fibroblasts was assessed using the Human OmniExpress24 array (∼700,000 markers, Illumina) and analysed using KaryoStudio software (Illumina).
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bioRxiv - Molecular Biology 2021Quote: ... The RNA- Seq library was prepared by the Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina, RZG1224) and TruSeq Stranded mRNA Library Prep Kit (Illumina ...
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bioRxiv - Microbiology 2020Quote: Raw reads were aligned to the human genome (hg19) using the RNA-Seq Aligment App on Basespace (Illumina, CA), following differential expression analysis using DESeq213 ...
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Naked Mole-Rat Hematopoietic Stem and Progenitors are Highly Quiescent with an Inherent Myeloid BiasbioRxiv - Cell Biology 2021Quote: RNA from sorted human and naked mole-rat populations was sequenced at ∼100 million reads on a HiSeq2500v4 (Illumina), the SMARTer® Ultra® Low RNA Kit (Takara ...
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Evolutionarily divergent mTOR remodels the translatome to drive rapid wound closure and regenerationbioRxiv - Developmental Biology 2021Quote: ... The libraries were prepared by the Stanford Genomic Services Center per manufacturer’s instructions using the TruSeq Stranded Total RNA Library Prep with Ribo-Zero Gold Human/Mouse/Rat (Illumina) and sequenced (PEx150 ...
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bioRxiv - Microbiology 2021Quote: ... Ribosomal reduction libraries were prepared with the Ribo-Zero Gold rRNA removal kit (human/mouse/rat) MRZG12324 (Illumina, USA) and sequenced at the Yale University Center of Genome Analysis (YCGA ...
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bioRxiv - Cell Biology 2020Quote: ... Trimmed reads were mapped to the National Cener for Biotechnology Information (NCBI) human reference genome (GRCh38) downloaded from Illumina iGenomes (http://igenomes.illumina.com.s3-website-us-east-1.amazonaws.com/Homo_sapiens/NCBI/GRCh38/Homo_sapiens_NCBI_GRCh38.ta r.gz ...
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bioRxiv - Molecular Biology 2021Quote: ... Depletion of ribosomal RNA was carried out solely by use of the RiboZero Gold Human/Mouse/Rat kit (Illumina). Adapter sequences were based on the TruSeq small RNA sequences (Illumina) ...
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bioRxiv - Microbiology 2020Quote: ... Raw reads were aligned to the human genome (hg19) using the RNA-Seq Aligment App on Basespace (Illumina, CA), following differential expression analysis using DESeq227 ...
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bioRxiv - Genetics 2019Quote: Genotyping was performed by 23andMe using the Illumina Infimum DNA Human OmniExpress-24 BeadChip V4 (Illumina, San Diego, CA). This genotyping platform consists of approximately 570,000 SNPs ...
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bioRxiv - Genomics 2021Quote: ... Raw sequencing reads on FASTQ files were submitted to base quality control and mapped to human reference genome GRCh37/hg19 utilizing the MiSeq Reporter software (MSR, v2.6, Illumina). Variant calling was executed using two algorithms ...
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bioRxiv - Neuroscience 2021Quote: ... Genome integrity and cell identity tracking was assessed using the Human CytoSNP-12v2.1 beadchip array or OmniExpress24 array (Illumina) on genomic DNA generated using the All-Prep kit (Qiagen ...
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bioRxiv - Genomics 2022Quote: ... RNA-seq libraries were prepared from 600 ng of total RNA (RNA integrity number (RIN) >8.0) with TruSeq Stranded Total RNA Human/Mouse/Rat kit (Illumina). For polysome immunoprecipitation experiments ...
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bioRxiv - Microbiology 2020Quote: Raw reads were aligned to the human genome (hg19) using the RNA-Seq Alignment App on Basespace (Illumina, CA). The top 2000 gene counts with the highest variance were log transformed and Z-score normalized ...
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bioRxiv - Cancer Biology 2023Quote: ... indexed libraries for human WGS were constructed from 1.0 μg of gDNA using the TruSeq DNA PCR-Free Library Prep Kit (Illumina) according to the manufacturer’s instructions ...
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A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survivalbioRxiv - Developmental Biology 2023Quote: ... RNA-seq libraries were prepared using the TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat kit (Illumina) according to manufacturer instructions ...
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bioRxiv - Systems Biology 2024Quote: ... were performed using Illumina Human Methylation 450K (hitherto called 450K arrays)30,31 and Cuvertino et al used Infinium Methylation EPIC bead chip (Illumina)58 ...
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bioRxiv - Evolutionary Biology 2020Quote: ... as it was placed there in v2 (and is clearly part of the D haplotype block in visual examination of Illumina-read alignments), but was lost from later genetic maps due to low genotyping quality in this repetitive region (Flagel et al ...
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bioRxiv - Immunology 2019Quote: ... PCR products were indexed by Nextera XT index Kit Set A and Set D (Illumina; FC-131– 2001 and FC-131–2004) according to Illumina’s protocol for 16S metagenomic library preparation ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing libraries were prepared according to Illumina’s protocol for Preparing Libraries for Sequencing on the MiSeq (15039740 Rev. D) and sequencing was conducted using the Illumina MiSeq platform (V2 500 cycles, Illumina MS102-2003) according to the manufacturer’s instructions with modifications found in Kozich et al (2013 ...
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bioRxiv - Microbiology 2021Quote: Indexing of purified PCR products was performed using the Nextera XT Index kit v2 (Set D) as per manufacturer’s instruction (Illumina Inc, CA, USA). The libraries after indexing were quantified using Qubit dsDNA BR assay kit (Invitrogen ...
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bioRxiv - Developmental Biology 2020Quote: ... Ribosomal RNA was removed from 500ng of input RNA using either Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) from Illumina or NEBNext rRNA Depletion Kit (Human/ Mouse/ Rat) ...
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bioRxiv - Molecular Biology 2022Quote: ... RNA-Seq libraries were made following a standard protocol using Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina) and TruSeq Stranded mRNA Library Prep (Illumina) ...
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bioRxiv - Molecular Biology 2020Quote: ... Sequencing libraries were generated using the TruSeq Stranded Total RNA with Ribo-Zero Human/ Mouse/Rat Low-throughput (LT) kit (Illumina) and run on a NextSeq 500 for paired-end sequencing using the NextSeq 500/550 High Output v2 Kit ...
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bioRxiv - Cell Biology 2022Quote: ... libraries were prepared using the TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Human/Mouse/Rat Kit (cat. RS-122-2201/2202, Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2020Quote: ... DNA was sent to the UCSF Institute of Human Genetics Core for genotyping using SNP arrays (OmniExpress Exome kit, Illumina).
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bioRxiv - Genomics 2020Quote: ... to check for alias’s, gene summary (Entrez, Genecards and UniProtKB/Swiss-Prot) and mRNA expression in normal human tissues (GTEx, Illumina, BioGPS)