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Citations for Illumina :
501 - 550 of 681 citations for Dengue Virus VLP Serotypes 1 4 since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2020Quote: A total of 1 μg of total RNA was used to create libraries with Illumina TruSeq Stranded Total RNA Library Prep Kit (Illumina) according to manufacturer’s instructions ...
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bioRxiv - Cell Biology 2020Quote: ... 1 ug of DNA was processed according to manufacturer instructions (Paired-End DNA sample Prep Kit – Illumina – PE-930-1001), except that DNA was ligated to custom-made adapters for 4 hours at RT ...
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bioRxiv - Microbiology 2021Quote: A total of 1□ng of dsDNA was used to prepare sequencing libraries using the Nextera XT DNA kit (Illumina). Libraries were analysed on a High Sensitivity DNA Chip on the Bioanalyzer (Agilent Technologies) ...
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bioRxiv - Genomics 2019Quote: ... was isolated from 1 µg of total RNA and 6 RNA-Seq libraries were prepared using the TruSeq RNA Sample Preparation Kit (Illumina). Libraries were sequenced on an Illumina HiSeq 2000 platform at the Australian Genome Research Facility (AGRF ...
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bioRxiv - Microbiology 2021Quote: ... Libraries were prepared using 1 µg of RNA with TruSeq® stranded mRNA Preparation Kit (Illumina, San Diego, CA, USA) followed by sequencing with a Novaseq 6000 sequencer using 150 base read lengths in paired-end mode (Illumina ...
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bioRxiv - Molecular Biology 2021Quote: ... The index sequences were defined by the combination of primers with TruSeq HT index 1 (D 7xx) and TruSeq HT index 2 (D 5xx) (Illumina). Index PCR was performed using KAPA HiFi HS ReadyMix (Kapa Biosystems ...
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bioRxiv - Immunology 2021Quote: ... Stranded RNA libraries were then prepared from 1 μg total RNA using the TruSeq Stranded mRNA Prep Kit (Illumina, USA) following the manufacturer’s protocol ...
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bioRxiv - Genetics 2021Quote: WGS of constitutional DNA was performed using the Illumina HiSeq platform as described previously.1 Targeted MBD4 mutation screening was performed (i) using a custom MIP capture panel and sequenced on a NextSeq500 (Illumina) system ...
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bioRxiv - Developmental Biology 2021Quote: ... We tested two different amounts of Tagment DNA TDE1 enzyme (1 and 2 μl in a 50 μl reaction volume) (Illumina) per sample ...
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bioRxiv - Immunology 2022Quote: ... The library was sequenced on the NovaSeq 6000 with pair-end reads (26 bp for read 1 and 91 bp for read 2) (Illumina). Data available at accession number GSE195488.
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bioRxiv - Cancer Biology 2022Quote: ... whole-genome and targeted libraries were added to flow cell in a 67%-33% ratio and sequenced to approximately 16M fragments per sample corresponding to ~1-2x whole genome coverage using NovaSeq S4 sequencing (Illumina) with 150 bp paired-end reads.
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bioRxiv - Cancer Biology 2022Quote: ... Gene expression libraries and barcode enrichment libraries were pooled in an approximately 10:1 molar ratio and libraries were sequenced on the NovaSeq platform (Illumina).
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bioRxiv - Molecular Biology 2022Quote: ... The generated libraries were amplified using the KAPA HiFi Hotstart Ready Mix and Nextera Index Kit 1 (i7) and 2 (i5) primers (Illumina). Amplified libraries were purified using a 0.65x AMPure XP beads (Beckman Coulter ...
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bioRxiv - Developmental Biology 2022Quote: ... RNA-seq library preparation with Poly-A selection was performed with 1 µg of purified RNA using the TruSeq Stranded mRNA kit from Illumina and following the manufacturer’s protocol ...
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bioRxiv - Microbiology 2022Quote: ... 1 ng of host community DNA and viral assemblage DNA was used to generate Nextera XT libraries (Illumina; manufacturer’s protocol); After amplification (12 cycles ...
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bioRxiv - Systems Biology 2022Quote: ... cDNA libraries were prepared from 1 μg of total RNA using the TruSeq Stranded mRNA kit (Illumina, San Diego, CA) and the Sciclone NGSx Workstation (Perkin Elmer ...
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bioRxiv - Molecular Biology 2023Quote: ... The clustered flowcell is then sequenced with a 30b read 1 and an 11b index read using a HiSeq SBS v4 50 cycle kit (Illumina) following the manufacturer’s recommendations.
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bioRxiv - Plant Biology 2023Quote: ... The RNA-seq libraries were constructed with 1 μg of RNA per sample by following the manual of TruSeq Stranded mRNA kit (Illumina). The RNA-seq libraries were sequenced on an Illumina NovaSeq 6000 or an Illumina HiSeq 4000 sequencer.
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bioRxiv - Neuroscience 2022Quote: ... Libraries were pooled from different samples based on molar concentrations and sequenced with 1% PhiX spike-in on a NextSeq 500 instrument (Illumina) with 33 bases each for read 1 and read 2 ...
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bioRxiv - Microbiology 2022Quote: ... initial DNA extracts were diluted to DNA concentrations of 0.2 ng × μL−1 and used in metagenomic library preparations with the Nextera XT DNA Library Prep Kit (Illumina Inc.). For metatranscriptomes ...
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bioRxiv - Genomics 2022Quote: ... Illumina) following the Illumina recommended denaturation and loading recommendations which included a 1% PhiX spike in (PhiX Control v3 Illumina). Data was uploaded to Basespace (www.basespace.illumina.com ...
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bioRxiv - Cancer Biology 2023Quote: ... Paired-end sequencing was performed for all libraries (read 1:28 bp, index read: 10 bp, read2: 82 bp) on a NovaSeq 6000 (Illumina) using NovaSeq SP Reagent Kits (100 cycles).
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bioRxiv - Plant Biology 2023Quote: ... A single lane of HiSeq3000 was used for sequencing with 2×151 bp read length in presence of 1% PhiX (Illumina). A total of 296,241,916 reads was obtained.
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bioRxiv - Plant Biology 2023Quote: ... cDNA libraries were constructed from 1 μg/sample of total RNA using library preparation kits (NEBNext Ultra II RNA Library Prep Kit for Illumina 7770L ...
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bioRxiv - Immunology 2023Quote: ... TCR libraries were sequenced using an Illumina Novaseq 6000 S4 flowcell (67 bp read 1 and 140 bp read 2) (Illumina) using NovaSeq 6000 S4 Reagent Kit v1.5 (200 cycles ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced as 100 base single end reads on an Illumina HiSeq 2500 using TruSeq Rapid SBS sequencing kit version 1 and HCS version 2.0.12.0 data collection software (Illumina, San Diego, CA). Base-calling is performed using Illumina’s RTA version 1.17.21.3 ...
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bioRxiv - Microbiology 2023Quote: ... Amplicons were quantified with Qubit and sequenced as 1 x 78 nt reads on MiSeq or NextSeq 1000 instruments (Illumina)
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bioRxiv - Microbiology 2023Quote: ... Libraries for next-generation sequencing were constructed from 1-ng amplified genomes using the Nextera XT DNA Library Preparation Kit (Illumina) and sequenced using the MiSeq Reagent Kit v3 on the MiSeq Platform (Illumina) ...
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bioRxiv - Genomics 2023Quote: ... 96 libraries from 16 animals in batch 1 were performed using TruSeq RNA Library Preparation Kit v2 (RS-122-2001, RS-122-2002, Illumina) and were sequenced 50 base pairs ...
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bioRxiv - Genomics 2023Quote: ... Libraries for RNA-seq were prepared from 1 μg of total RNA using Truseq Total RNA Library Prep Kit (Illumina) following manufacturer’s protocols ...
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bioRxiv - Cancer Biology 2023Quote: RNA-seq libraries were prepared with 0,5-1 µg of total high quality RNA collected from samples and the Illumina Stranded Total RNA Prep kit (Illumina) according to manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2023Quote: ... Nuclei were mixed with 50 µl of transposition reaction mix containing Tagment DNA Enzyme 1 (Nextera DNA Library Preparation Kit, Illumina). The transposition reaction was carried out at 37°C and 600rpm for 30 min ...
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bioRxiv - Developmental Biology 2023Quote: Ribosomal RNAs were depleted from 1 µg of total RNA using TruSeq Stranded Total RNA kit Ribo-Zero components (Illumina) according to the manufacturer’ s protocol ...
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bioRxiv - Microbiology 2023Quote: ... Multiplexing of sgRNA challenge screens in BCBL-1 was performed utilizing 6-bp indexes and sequenced on a single lane of a HiSeq4000 (Illumina) using 50bp single-end (SE ...
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bioRxiv - Physiology 2023Quote: ... 1 ng of amplified cDNA was used to generate barcoded libraries using the Nextera XT DNA library preparation kit (Illumina). Basically ...
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bioRxiv - Genomics 2023Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument with 1.45 pM input and 1% PhiX control library spiked in (Illumina, USA) targeting 30-40 Million reads pairs per sample.
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bioRxiv - Neuroscience 2023Quote: ... Libraries were sequenced Paired-End 151 bases (in addition: 8 bases for index 1 and 8 bases for index 2) setup using the NovaSeq 6000 instrument (Illumina) and the S1 Flow-Cell loaded at a final concentration in Flow-Lane loaded of 340pM and including 1% PhiX.
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bioRxiv - Immunology 2023Quote: ... ADT and 3’ Gexp libraries were mixed at the ratio of 1:5 and sequenced on NovaSeq 6000 sequencer (Illumina) with a configuration of 28/8/0/91-bp for cell barcode ...
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bioRxiv - Bioengineering 2023Quote: Pair-end libraries (2×150 bp) were prepared from 1 µg of genomic DNA of the evolved isolates and sequenced using an MiSeq sequencer (Illumina).
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bioRxiv - Genomics 2023Quote: RNA-seq libraries were prepared from 1 μg of total RNA using the TruSeq RNA Library Prep Kit v2 (Illumina) with poly(A ...
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bioRxiv - Microbiology 2023Quote: ... All sequencing runs were performed with a spike-in of 1% PhiX control library V3 (Illumina, Cat. FC-110-3001). The sequencing mean library size was 134,629,540.5 reads [range ...
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bioRxiv - Developmental Biology 2024Quote: ... Amplification was carried out using 3 µl of NMP per sample and adding 1 µl of each dual-indexed (i7 and i5; Illumina) primer ...
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bioRxiv - Genomics 2024Quote: ... The sequencing library was prepared with 1 μg of DNA using the TruSeq PCR-free DNA sample preparation kit (cat# 20015962, Illumina), according to the TruSeq DNA PCR-free Reference Guide ...
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bioRxiv - Immunology 2024Quote: ... the antibody barcode library was pooled at a ratio of 1:5 with the gene expression library and sequenced on a NextSeq 2000 (Illumina) to an average depth of 34,000 reads per cell.
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced Paired-End 51 bases (in addition: 8 bases for index 1 and 8 bases for index 2) setup using the NovaSeq 6000 instrument (Illumina). SP Flow-Cell was loaded at a final concentration in Flow-Lane loaded of 400pM and including 1% PhiX ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced Single-reads 76 bases (in addition: 8 bases for index 1 and 8 bases for index 2) on NextSeq 500 (Illumina) using the NextSeq 500 High Output Kit 75-cycles (Illumina ...
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bioRxiv - Neuroscience 2023Quote: ... Female samples after MR2 were sequenced (single-end reads, 1×50 nt) with Illumina NextSeq 2000 (Illumina, San Diego, USA). Quality checks and sequencing were performed by StarSEQ GmbH (Mainz ...
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bioRxiv - Genetics 2024Quote: ... we aligned the corresponding short reads to the human reference GRCh38 using bwa mem23 (v 0.7.17-r1188; -t 48 -R “@RG\tID:1\tLB:lib1\tPL:ILLUMINA\tSM:
\tPU:unit1”). Next ... -
bioRxiv - Molecular Biology 2024Quote: ... CUT&RUN libraries (10–20 Mio reads per sample and 1/3 of reads for the controls) were sequenced on a NovaSeq 6000 (Illumina) paired end 100 bp at the Deep Sequencing Facility (Max Planck Institute for Immunobiology and Epigenetics ...
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bioRxiv - Molecular Biology 2024Quote: ... Illumina indexes were added by amplifying 1 ng DNA to a 50 μl PCR reaction using Kapa HS enzyme and unique dual indexing primers (Illumina) for 11 cycles (Denaturation 95°C 3min ...