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Citations for Illumina :
1 - 50 of 580 citations for D Iditol 1 13C since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Molecular Biology 2021Quote: ... The index sequences were defined by the combination of primers with TruSeq HT index 1 (D 7xx) and TruSeq HT index 2 (D 5xx) (Illumina). Index PCR was performed using KAPA HiFi HS ReadyMix (Kapa Biosystems ...
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bioRxiv - Microbiology 2023Quote: ... C and D (Illumina). Amplicon concentration across samples was normalized to 200 ng/μl using the Qubit high sensitivity dsDNA assay before pooling ...
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bioRxiv - Cell Biology 2020Quote: ... and D (v.2, Illumina) and sequenced on HiSeq4000 and NovaSeq6000 (Illumina ...
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bioRxiv - Microbiology 2022Quote: ... Set D (Illumina, San Diego, USA). The sequences of the four sets of primers used during library preparation (limited cycle PCR ...
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bioRxiv - Microbiology 2023Quote: ... Revision D (Illumina, San Diego, CA) beginning with the Repair Ends step (q.s ...
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bioRxiv - Microbiology 2021Quote: ... B and D (Illumina, San Diego, CA). With a final reaction volume of 50 μL ...
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bioRxiv - Synthetic Biology 2022Quote: ... and Nextera XT index kit D (Illumina). Amplicon sizes were verified on a Tapestation using the High Sensitivity D1000 Screentape (Agilent) ...
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bioRxiv - Pathology 2024Quote: ... aphidicola (C, D) based on SNPs identified from Illumina sequencing ...
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bioRxiv - Cell Biology 2022Quote: ... The Nextera XT Index Kit v2 Sets A-D (Illumina) barcodes were used for the amplified sequencing libraries and the quality of libraries was assessed using a Qubit fluorometer (ThermoFisher Scientific ...
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bioRxiv - Neuroscience 2020Quote: ... Sample indexing was performed using index sets A and D (Illumina). At this point ...
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bioRxiv - Microbiology 2023Quote: ... Barcodes of the Illumina NexteraTM DNA UD index set A-D (Illumina) were diluted 1:5 prior to the library amplification ...
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bioRxiv - Immunology 2020Quote: ... Single-cell TCR V(D)J libraries were sequenced with HiSeq2500 machine (Illumina). All sequencing was done according to the manufacturer’s specification (10X Genomics).
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bioRxiv - Genomics 2024Quote: ... using IDT for Illumina – Nextera DNA UD Indexes Sets A-D (Illumina, USA). Fragmentation times and amplification cycles were performed according to the ranges recommended by the manufacturer ...
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bioRxiv - Cancer Biology 2023Quote: ... and V(D)J-enriched libraries were sequenced on a NextSeq 550 (Illumina).
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bioRxiv - Immunology 2022Quote: ... and BCR enriched V(D)J libraries were sequenced either on a Nextseq500 (Illumina) using a high output 150 cycle flowcell ...
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bioRxiv - Microbiology 2023Quote: ... and IDT® for Illumina® DNA/RNA UD Indexes Set D (Illumina #20042667). Concentrations of 1.8 × AMPure XP magnetic bead purified libraries were measured using Qubit™ 1× dsDNA High Sensitivity Assay Kit (Thermo #Q33231 ...
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bioRxiv - Immunology 2021Quote: ... Both gene expression and V(D)J libraries were sequenced on a Novaseq S4 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell ...
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bioRxiv - Immunology 2022Quote: ... Both gene expression and V(D)J libraries were sequenced on a Novaseq S4 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell ...
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bioRxiv - Systems Biology 2023Quote: ... Libraries for Study D were prepared with the Nextera XT Library Prep kit (Illumina, USA) and sequenced with a paired-end 2x150bp protocol on a NovaSeq 6000 (Illumina ...
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bioRxiv - Molecular Biology 2024Quote: Libraries were constructed using the D-Plex Small RNA-seq Kit from Illumina (Diagenode, C05030001) and the short RNA fraction was sequenced on the NextSeq 500 System (Illumina ...
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bioRxiv - Microbiology 2024Quote: ... or TCR/BCR V(D)J libraries were sequenced on a NovaSeq sequencing platform (Illumina) with a target of 50,000 read pairs per cell.
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bioRxiv - Immunology 2024Quote: ... Both gene expression and V(D)J libraries were sequenced on a NovaSeq 6000 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell ...
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bioRxiv - Immunology 2024Quote: ... Both gene expression and V(D)J libraries were sequenced on a Novaseq S4 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell ...
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bioRxiv - Immunology 2022Quote: ... All BCR enriched V(D)J libraries were pooled together and sequenced on a NextSeq500 (Illumina) using the same parameters as previously mentioned.
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bioRxiv - Physiology 2021Quote: ... and the combination of 384 Unique Dual Indexes (Illumina-Set A to D, Ref. 20027213-20027216). Using the Mosquito HV robot ...
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bioRxiv - Biochemistry 2024Quote: ... Indexes were added by PCR (Table 2) using the Nextera IDT UD Set D (Illumina 20027213) for multiplex sequencing ...
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bioRxiv - Immunology 2023Quote: ... V(D)J region-enriched libraries were pooled and sequenced using the NovaSeq 6000 Sequencing System (Illumina).
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bioRxiv - Systems Biology 2021Quote: ... ADT and V(D)J libraries were sequenced separately on a Next-seq platform (Illumina, San Diego, CA). The sequencing depths are shown in Table S2.
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bioRxiv - Microbiology 2021Quote: ... The sequencing library was prepared using the Nextera XT V.2 Index Kit (Sets A and D, Illumina) according to the Illumina 16S MiSeq Sequencing Library protocol ...
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bioRxiv - Genomics 2021Quote: ... standard Nextera XT Index Kit indexes were used (Sets A to D for up to 384 combinations, Illumina Catalogue No’s FC-131-2001 ...
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bioRxiv - Immunology 2021Quote: ... diluted and denatured to a final concentration of 1.8nM using the Illumina Denaturing and Diluting libraries for the NextSeq 500 protocol Revision D (Illumina). Cluster generation and 75-bp paired-end ...
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bioRxiv - Immunology 2020Quote: ... up to four plates were barcoded at a time with Nextera XT Index Kit v2 Sets A-D (Illumina). Finally ...
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bioRxiv - Immunology 2022Quote: ... up to four plates were barcoded at a time with Nextera XT Index Kit v2 Sets A–D (Illumina). Finally ...
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bioRxiv - Immunology 2022Quote: ... up to four plates were barcoded at a time with Nextera XT Index Kit v2 Sets A–D (Illumina). Dual-barcoded libraries were pooled and sequenced using Illumina Nextseq 550 platform ...
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bioRxiv - Immunology 2023Quote: ... HTGTS-V(D)J-seq libraries were sequenced using paired-end 300-bp sequencing on a Mi-Seq (Illumina) machine ...
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bioRxiv - Immunology 2021Quote: ... The cDNA was enriched for V(D)J cDNA using the Human B cell Chromium Single Cell V(D)J Enrichment Kit (Cat#1000016) followed by library construction to add the priming sites used by Illumina sequencers ...
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bioRxiv - Microbiology 2024Quote: ... Raw genomic reads obtained by Illumina HiSeq 2500 and NovaSeq 6000 (for D. grisea, E. coxiae, Galdieria sp. ACUF 613, M. erythrocladioides, P. aerugineum, and T. oligopyrenoides) and by Illumina HiSeq 2500 and NovaSeq 6000 plus Oxford Nanopore MinION Mk 1B (for R ...
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Impairment of a distinct cancer-associated fibroblast population limits tumour growth and metastasisbioRxiv - Cancer Biology 2020Quote: ... mice were injected intraperitoneally with 150 mg kg−1 D-luciferin (Caliper Life Sciences) in 100 μL and mice imaged in vivo using an IVIS imaging chamber (IVIS Illumina II). Luminescence measurements (photons/second/cm2 ...
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bioRxiv - Immunology 2022Quote: ... and the V(D)J library was sequenced with NextSeq 500/550 Mid Output Kit v2.5 (300 Cycles) (Illumina, cat. 20024905).
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bioRxiv - Pharmacology and Toxicology 2023Quote: ... and dual-indexed with Nextera XT Index Kit V2 Sets A-D (FC-131-2001, FC-131-2002, FC-131-2003, FC-131-2004, Illumina, USA) according to the manufacturer’s recommendations ...
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bioRxiv - Cancer Biology 2023Quote: Mice were injected intraperitoneally with 150 mg kg-1 D-luciferin (Caliper Life Sciences) in 100 μL and mice imaged in vivo using an IVIS imaging chamber (IVIS Illumina II). Luminescence measurements (photons per second per cm2 ...
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bioRxiv - Immunology 2024Quote: ... The 5’ expression library and the V(D)J library were sequenced with NovaSeq 6000 S1 (100 cycles) (Illumina, cat. 20012865).
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bioRxiv - Evolutionary Biology 2020Quote: ... as it was placed there in v2 (and is clearly part of the D haplotype block in visual examination of Illumina-read alignments), but was lost from later genetic maps due to low genotyping quality in this repetitive region (Flagel et al ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing libraries were prepared according to Illumina’s protocol for Preparing Libraries for Sequencing on the MiSeq (15039740 Rev. D) and sequencing was conducted using the Illumina MiSeq platform (V2 500 cycles, Illumina MS102-2003) according to the manufacturer’s instructions with modifications found in Kozich et al (2013 ...
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bioRxiv - Microbiology 2021Quote: Indexing of purified PCR products was performed using the Nextera XT Index kit v2 (Set D) as per manufacturer’s instruction (Illumina Inc, CA, USA). The libraries after indexing were quantified using Qubit dsDNA BR assay kit (Invitrogen ...
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bioRxiv - Immunology 2024Quote: ... The V(D)J libraries were then denatured and diluted using a MiSeq Reagent Kit v3 (150- cycle) (Illumina, MS-102-3001) and sequenced on an lllumina MiSeq ...
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bioRxiv - Microbiology 2021Quote: ... Fragments were then indexed with 10 nucleotide barcode sequences using Nextera XT Index Kit v2 Set D primers (Illumina, San Diego, California, USA). Indexing PCR reactions were run in triplicate with a volume of 25 μL using 12.5 μL NEB Next High-Fidelity Master Mix ...
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bioRxiv - Microbiology 2021Quote: ... Next the amplicons were checked for their size and purity on a 1.5 % agarose gel and if suitable subjected to the index PCR using the Nextera XT Index Kit v2 Set C/D (Illumina, FC-131-2003). After index PCR the samples were cleaned again with AmPure XP Beads (Beckman Coulter Life Science Cat ...
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bioRxiv - Genetics 2020Quote: ... and Tajima’s D were estimated from five whole-genome resequenced great reed warbler males (150 bp paired-end Illumina Hiseq X, Sigeman et al. 2020b) from the same population as the pedigree samples ...
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bioRxiv - Cell Biology 2024Quote: ... were pooled at a 1:1:1:etc ratio before sequencing on an Illumina NextSeq 500/550 instrument using a version 2 kit (Illumina). Fastq files were generated for each library in Illumina BaseSpace ...