Labshake search
Citations for Illumina :
1 - 50 of 917 citations for Copper;5 10 15 20 tetrakis 4 methylphenyl porphyrin 22 24 diide since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2022Quote: ... pH 7.4, 5 mM MgCl2, 10% dimethyl formamide, 0.33x PBS, 0.01% digitonin, 0.1% Tween-20, 100 nM Illumina Tn5 Transposase (Illumina, 20034197)) ...
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bioRxiv - Genomics 2021Quote: ... Nuclear isolation of 5×10^4 cells was followed by treatment with Nextera Tn5 enzyme (Illumina, 20034198) for 45 minutes at 37°C ...
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bioRxiv - Systems Biology 2021Quote: ... 22 μL nuclease-free-water) (Illumina FC-121-1030 Nextera DNA library prep kit) ...
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bioRxiv - Molecular Biology 2020Quote: ... 120 μl pooled 20 pM library and 15 μl denatured 20 pM PhiX control library (Illumina, FC-110-3001) after a 2 minute heat treatment at 96 °C followed by a 5 min incubation on ice ...
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bioRxiv - Microbiology 2021Quote: ... with 5% (v/v) 20 pM PhiX (Illumina), using 150 cycle v3 cartridges ...
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bioRxiv - Genomics 2024Quote: ... we spiked in 10-15% PhiX sequencing library DNA (Illumina) or whole genome libraries ...
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bioRxiv - Microbiology 2023Quote: Raw data generated from Illumina (n=22) and PacBio (n=2 ...
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bioRxiv - Genomics 2021Quote: ... and four mate-pair sequencing libraries (insert sizes of 2, 5, 10, and 15 kb) in accordance with manufacturer protocols (Illumina, San Diego, CA, USA). Libraries were then sequenced using a HiSeq2000 instrument (Illumina) ...
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bioRxiv - Evolutionary Biology 2021Quote: ... Each clone (n=22) was sequenced by Illumina with 150pb paired-end reads ...
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bioRxiv - Genomics 2020Quote: ... using 5% PhiX without dark cycles (n = 11) or 10-20% PhiX with 7 dark cycles (protocol provided by Illumina, n = 49). A maximum of 12 samples were pooled in one sequencing run resulting in 19.05 million [17.05 – 21.72] single-end reads per sample on average (supplementary table 3).
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bioRxiv - Cancer Biology 2024Quote: ... Up to 96 equimolar pooled samples spiked with 10-15% PhiX (Illumina) were sequenced with the MiSeq Reagent Kit v3 (Illumina ...
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bioRxiv - Genomics 2023Quote: ... about 1.5 ng purified pre-amplified cDNA sample was fragmented in four 20 μl tagmentation mix (10 μl 2x TD buffer, 5 μl Nextera XT (Illumina, FC-131-1096), and 5 μl cDNA sample ...
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bioRxiv - Cancer Biology 2022Quote: ... Bisulfite capture-sequencing libraries with inclusion of 15-20% spike-in PhiX Control v3 library (Illumina) were clustered on an Illumina Novaseq 6000 S4 flow cell followed by 150bp paired-end sequencing.
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bioRxiv - Molecular Biology 2024Quote: ... Bisulfite capture-sequencing libraries with inclusion of 15-20% spike-in PhiX Control v3 library (Illumina) were clustered on an Illumina Novaseq 6000 S4 flow cell followed by 150bp paired-end sequencing.
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bioRxiv - Biophysics 2023Quote: ... 100-120 μl pooled-denatured 20 pM library and 10-20 μl 20 pM PhiX control library (Illumina, FC-110-3001) to provide a reasonable spot density in general ...
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bioRxiv - Immunology 2022Quote: ... 22 μl of nuclease-free water) (#20034197, Illumina; #G9441, Promega) for incubattion at 37°C with shaking at 300 rpm for 30 min ...
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bioRxiv - Genetics 2023Quote: ... 10-20% PhiX control DNA (Illumina; cat. no. FC-110-3001) was spiked into the pooled 2 nM DNA amplicon library ...
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bioRxiv - Genetics 2023Quote: ... 10-20% PhiX control DNA (Illumina; cat. no. FC-110-3001) was spiked into the pooled 2 nM DNA amplicon library ...
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bioRxiv - Cell Biology 2024Quote: ... 22 μl of nuclease-free water) (Illumina, #20034197 and Promega, #G9441) at 37°C for 30 minutes with 300 rpm shaking ...
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bioRxiv - Genetics 2020Quote: ... and IV-5) individuals were genotyped using the Infinium Global Screening Array-24 v1.0 BeadChip (Illumina, SanDiego, CA, USA) according to manufacturer’s protocols ...
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bioRxiv - Cell Biology 2022Quote: ... and Nextera™ DNA CD Indexes (24 Indexes, 24 Samples) (ref #20018707, Illumina) according to the manufacturer’s protocol (Nextera DNA Flex Library Document ...
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bioRxiv - Molecular Biology 2022Quote: ... 0.5 µl of 10% Tween-20 and 2.5 µl of transposase (Illumina Tagment DNA enzyme 1 ...
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bioRxiv - Neuroscience 2024Quote: ... sequencing adaptors P5 and P7 were introduced following the 10xGenomics dual-index setup: 20-50ng PCR product was added to library PCR mix (50% KAPA, 10% Betaine, 20% primer Dual index (Illumina)) ...
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bioRxiv - Neuroscience 2024Quote: ... sequencing adaptors P5 and P7 were introduced following the 10xGenomics dual-index setup: 20-50ng PCR product was added to library PCR mix (50% KAPA, 10% Betaine, 20% primer Dual index (Illumina)) total 20µl ...
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bioRxiv - Cancer Biology 2023Quote: ... and all samples were eluted in 22 µL of Resuspension Buffer (Illumina). As with the Amplification sets ...
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bioRxiv - Neuroscience 2023Quote: ... and all samples were eluted in 22 μl of Resuspension Buffer (Illumina). All samples were quantitated using PicoGreen using Molecular Bynamics M2 SpectraMax instrument ...
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bioRxiv - Genomics 2021Quote: ... 5-10% spike-in library (e.g. PhiX control from Illumina) must be added to the lane to balance the nucleotide distribution at the beginning of the forward and reversed reads ...
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bioRxiv - Microbiology 2024Quote: ... 5-10% phiX spike-in (NextSeq PhiX Control Kit, Illumina) was added to the library to further support sequencing diversity and samples were run on the Illumina NextSeq 1000/2000 platform (single-end ...
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bioRxiv - Genomics 2022Quote: ... The libraries prepared were sequenced using the FLO-MIN106 (R9.4) flowcells on PromethION 24 (P24) Nanopore platform and following the paired-end sequencing workflow of Illumina HiSeq2000 platform (Illumina, USA) (Supplementary Method).
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bioRxiv - Genomics 2021Quote: ... The final libraries were then pooled together (15-20 at a time) and sequenced using the NextSeq 500/550 kit High Output Kit v2.5 (Illumina 20024906). The Illumina output files were converted to fastq format using bcl2fastq (v2.20.0.422 ...
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bioRxiv - Cancer Biology 2021Quote: ... Each well contained 10 μL tagmentation buffer (5 μL NIB and 5 μL TD buffer from Illumina). For the second sort plate ...
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bioRxiv - Bioengineering 2022Quote: ... A 250-PE kit was sequenced with 15% phiX at 10 pM concentration using a NextSeq (Illumina). After quality control filtering(40) ...
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bioRxiv - Bioengineering 2022Quote: ... A 250-PE kit was sequenced with 15% phiX at 10 pM concentration using a MiSeq (Illumina). After quality control filtering(40) ...
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bioRxiv - Molecular Biology 2020Quote: ... Samples were diluted and mixed with 5-20% phiX control v3 (Illumina FC-110-3001) and sequenced with oSK326 for read 1 and oSK324 for the index read.
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bioRxiv - Molecular Biology 2021Quote: ... libraries from amplicons 1–4 were mixed with 5% PhiX DNA control library (Illumina) and sequenced ...
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bioRxiv - Genomics 2021Quote: ... then 4 pM of the pooled library with 5% PhiX v3 control (Illumina, USA) was loaded onto an Illumina MiSeq instrument and sequenced using MiSeq V3 chemistry ...
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bioRxiv - Cancer Biology 2020Quote: ... The pooled products with 10-20% PhiX were sequenced on HiSeq 2500 system (Illumina).
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bioRxiv - Molecular Biology 2023Quote: Trimmomatic version 0.39 was employed to trim reads after a quality drop below a mean of Q20 in a window of 20 nucleotides and keeping only filtered reads longer than 15 nucleotides (Bolger et al., Trimmomatic: a flexible trimmer for Illumina sequence data). Reads were aligned versus Ensembl human genome version hg38 (Ensembl release 104 ...
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bioRxiv - Immunology 2021Quote: ... DRB3/4/5 kits) for sample library preparations and ran on a Miseq sequencer (Illumina), following the manufacturer’s instructions.
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bioRxiv - Genomics 2020Quote: ... Next nuclei were pelleted and the transposition reaction was performed incubating the lysate for 30 min at 37 °C under agitation in the presence of Transposition mixture (Tris-HCl pH 7.6 10 mM, MgCl2 5 mM, dimethyl formamide 10%, Tn5 enzyme 100 nM – Illumina #20018704 ...
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bioRxiv - Molecular Biology 2022Quote: ... The chromatin was then tagmented by resuspending beads in 29 µl Tagmentation Buffer (10 mM Tris-HCl pH 8.0, 5 mM MgCl2, 10% dimethylformamide) and adding 1 µl of transposase (Illumina). Samples were incubated at 37 °C for 10 min and the reaction was terminated by adding 150 µl RIPA buffer ...
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bioRxiv - Genetics 2021Quote: ... homokaryotic mutants were crossed to a genetically polymorphic Mauriceville strain and approximately 15-20 antibiotic-resistant progeny were pooled and prepared for whole genome sequencing using the Nextera kit (Illumina, FC-121-1030). Mapping of the critical mutations was performed as previously described (Hunter 2007 ...
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bioRxiv - Genomics 2023Quote: ... We used 15 mins incubation on ice in the nuclei preparation step and the Tn5 reaction was performed in 50 μl of custom transposition buffer (10 mM Tris pH 8, 5 mM MgCl2 and 10% dimethylformamide) with 2.5 μl Tn5 transposase (Illumina, 20034197) at 37°C while mixing at 1000 rpm for 30 mins ...
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bioRxiv - Microbiology 2023Quote: ... 4 μl of the 3’-5’-adapter-ligated RNA was mixed with barcoded RT primers (Illumina) and cDNA synthesis was performed using SuperScript™ II Reverse Transcriptase (Invitrogen ...
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bioRxiv - Molecular Biology 2020Quote: Libraries were mixed in equimolar amounts (10 to 15 libraries per pool) and library pools were sequenced on a HiSeq 2000 (2×75bp) (Illumina) at the CNAG ...
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bioRxiv - Molecular Biology 2024Quote: ... The libraries were adjusted to 10 pM spiked in with 15% PhiX Control v3 Library and sequenced on the NextSeq550 and HiSeq2500 (Illumina) platform (R1 – 54 cycles ...
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bioRxiv - Molecular Biology 2024Quote: ... and clustered on an Illumina Novaseq 6000 S4 flow cell followed by 150bp paired-end sequencing with inclusion of 10-15% spike-in PhiX Control v3 library (Illumina). Controlled access to DNase-seq ...
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bioRxiv - Developmental Biology 2022Quote: ... Paired-end 150 bp sequencing of resulting 22 ATAC-seq libraries was performed on NovaSeq6000 (Illumina) by Novogene company ...
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bioRxiv - Evolutionary Biology 2022Quote: ... All the 24 ramets were sequenced by Illumina Hiseq ...
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bioRxiv - Genomics 2023Quote: ... Trimmomatic version 0.39 was employed to trim reads after a quality drop below a mean of Q15 in a window of 5 nucleotides and keeping only filtered reads longer than 15 nucleotides (Trimmomatic37: a flexible trimmer for Illumina sequence data). Reads were aligned versus Ensembl mouse genome version mm10 (Ensembl release 101 ...