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Citations for Illumina :
1 - 50 of 65 citations for Chromosome 11 Open Reading Frame 53 C11ORF53 Antibody Biotin since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2021Quote: ... (53) using Nextera XT (Illumina). Paired-end reads were sequenced on the MiSeq platform (2 × 150 cycles).
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bioRxiv - Genetics 2019Quote: ... 2) probes annotated to the X and Y chromosomes by Illumina, 3 ...
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bioRxiv - Genetics 2019Quote: ... an open-source method that is being developed by Illumina, Inc ...
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bioRxiv - Cancer Biology 2024Quote: ... The chromosome copy number analysis was performed in GenomeStudio v.2.0 (Illumina) by using the cnvPartition v.3.2.1 plugin ...
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bioRxiv - Evolutionary Biology 2024Quote: ... we fitted the coverage data along the chromosomes at two timepoints (first Illumina sequencing and second nanopore sequencing ...
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bioRxiv - Molecular Biology 2021Quote: ... Sequencing reading was performed with a NovaSeq 6000 system (Illumina). TM5(-Dox ...
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bioRxiv - Cancer Biology 2024Quote: ... We excluded probes targeting the sex chromosomes and those lacking a UCSC RefGene annotation (Illumina Human Methylation EPIC annotation 1.0 B5) ...
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bioRxiv - Immunology 2021Quote: ... and productive in-frame junction sequences were paired by Illumina read ID and compiled by CDR3 nucleotide and V(D)J gene identity ...
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bioRxiv - Genomics 2021Quote: ... and (3) 134 Gb (~100× depth) chromosome conformation capture sequencing (Hi-C) data (sequenced by Illumina platform).
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bioRxiv - Genetics 2021Quote: ... the DNA sequencing reads (pre-mapped to the X chromosome by Illumina’s ISIS Analysis Software v.2.5.26.1352) were realigned to the GRCh38 X chromosome reference sequence using BWA-MEM in SpeedSeq v0.1.253 ...
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bioRxiv - Genomics 2022Quote: ... Chromosome-scale scaffolding was then performed by HiRise44 with Hi-C reads obtained from HiSeq 2500 (Illumina).
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bioRxiv - Cancer Biology 2019Quote: ... we obtained 11 DNA methylation datasets (Illumina 450k platform) from Gene Expression Omnibus (GEO ...
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bioRxiv - Cancer Biology 2022Quote: ... Prepared RNA libraries were sequenced by 79 + 79 paired-end reading using NextSeq550 (Illumina).
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bioRxiv - Genetics 2019Quote: ... Reading of the chips was performed on iScan+ scanners (Illumina®, San Diego, USA).Primary analysis of the genotyping results was done using the GenomeStudio software (Illumina® ...
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bioRxiv - Immunology 2022Quote: ... Sequencing was performed using 75-base single-end reading on a NextSeq instrument (Illumina).
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bioRxiv - Genetics 2022Quote: ... sequence reads were mapped to the mouse reference genome GRCm38/mm10 (iGenomes, Illumina; chromosomes 1-19, X, Y, M) using the Rsubread v1.28.1 package in R v3.4.4 ...
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bioRxiv - Genomics 2020Quote: Libraries for mini-chromosome sequencing were generated following the general guidelines of the Nextera Flex library preparation kit (Illumina). We modified the protocol as follows ...
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bioRxiv - Genetics 2021Quote: ... Loss of heterozygosity along the entire long arm of chromosome 15 in AS-UPD9 iPSCs was confirmed by Illumina CytoSNP-850K v1.2 array by the University of Connecticut Chromosome Core ...
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bioRxiv - Genomics 2020Quote: ... and open sea regions64) as indicated by the Illumina HumanMethylation450 v1.2 Manifest (Illumina Inc., San Diego, USA), and
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bioRxiv - Immunology 2022Quote: ... Samples were sequenced using 150 bp paired-end reading on a NovaSeq 6000 instrument (Illumina). RNA-sequencing datasets from P25 RPE obtained from C57BL/6 ...
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bioRxiv - Cancer Biology 2022Quote: ... for 11 cycles and sequenced on a NextSeq 500 (Illumina). All samples were processed at the Center for Epigenetics Research (CER ...
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bioRxiv - Genomics 2021Quote: ... The consensus sequence was generated from whole-genome Illumina data of wheat Synthetic W7984 (SRP037990, Chapman et al., 2015) while the chromosome-specific units were reconstructed from Illumina reads for CS 1BS (ERX250504 ...
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bioRxiv - Genetics 2022Quote: Three genotyping platforms were used across the ADGC cohorts with sufficient Y chromosome probes to allow copy number determination (Illumina 610 ...
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bioRxiv - Cell Biology 2023Quote: ... RNA-seq libraries were subjected to paired-end sequencing (53 nucleotides each) on NovaSeq 6000 (Illumina) using a NovaSeq 6000 SP Reagent Kit (Illumina) ...
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bioRxiv - Immunology 2022Quote: ... Samples were sequenced using 150bp base pair paired-end reading on a NovaSeq 6000 instrument (Illumina). The raw reads were then subjected to trimming by btrim 10 to remove sequencing adaptors and low-quality regions ...
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bioRxiv - Genetics 2019Quote: ... We also updated the positions of 495 SNPs annotated as lying on the pseudo-autosomal part of the X chromosome (Chr=‘XY’ in the Illumina manifest) but with position = 0 ...
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bioRxiv - Cancer Biology 2019Quote: ... with some modifications (53) using the enzyme and buffer provided in the Nextera Library Prep Kit (Illumina). Tagmented DNA was then purified using the MinElute PCR purification kit (Qiagen) ...
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bioRxiv - Evolutionary Biology 2023Quote: ... (2016) sequenced mouse whole genomes to 11-26x coverage (Illumina HiSeq 2000) from natural populations of house mouse (Mus musculus) ...
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bioRxiv - Evolutionary Biology 2023Quote: We sequenced the targeted Y-chromosome regions in 5,020 samples using the YHseqY3000 panel on the Illumina platform (Illumina, San Diego, CA, USA) and used the BWA v.0.7.13 (Li and Durbin 2009 ...
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bioRxiv - Immunology 2024Quote: ... RNAseq data of 4 databases covering 66 healthy tissues (Uhlen: n=122 individuals, n=32 tissues65; GTEx: n=1,315 individuals, n=53 tissues66; Illumina body map ...
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bioRxiv - Microbiology 2022Quote: ... libraries were subjected to paired-end sequencing with a reading length of 150 bp using Illumina Novaseq 6000 (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... The captured fragments were pair-end sequenced by 101 bp reading using NovaSeq 6000 with S4 flow cell (Illumina). Sequenced reads were aligned to reference human genome (GRCh37/hg19 ...
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bioRxiv - Synthetic Biology 2023Quote: ... The biotin-labeled fragments were further enriched and sequenced by Illumina Novaseq ...
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bioRxiv - Plant Biology 2020Quote: ... The libraries thus obtained were characterized and quantified before sequencing using a single lane Hiseq4000 and 50 cycles PE reading (Illumina).
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bioRxiv - Immunology 2020Quote: ... RNA libraries were then prepared from two biological replicates per condition and samples were sequenced using 75 base pair single-end reading on HiSeq 2500 high-output instrument (Illumina). The raw reads were then subjected to trimming by Trim Galore (https://github.com/FelixKrueger/TrimGalore ...
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bioRxiv - Genomics 2019Quote: ... Biotin labeled DNA was pull-downed by streptavidin beads followed by Illumina adaptor ligation and PCR amplification ...
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bioRxiv - Plant Biology 2019Quote: ... 8-11 kb size were made following the standard Illumina protocols (Illumina, San Diego, CA) and sequenced with HiSeq4000 platform (Illumina ...
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bioRxiv - Microbiology 2023Quote: The USEARCH pipeline (v.11) [44] was used to process the data obtained from Illumina sequencing ...
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bioRxiv - Genomics 2019Quote: ... DNA fragments were subjected to 11 cycles of PCR amplification with Nextera dual index primers (Illumina) and the NEBNext High Fidelity 2X PCR Master Mix (New England Biolabs ...
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bioRxiv - Genetics 2023Quote: ... 10/11-plex pre- pooled target capture was performed and sequenced in 43 lanes by Illumina HiSeq 2000 ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing libraries were prepared as described by the Earth Microbiome Project [53] and sequenced on an Illumina MiSeq Sequencer (Illumina, San Diego, CA).
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bioRxiv - Evolutionary Biology 2021Quote: ... and 2017 (n = 11) were prepared into two Illumina TruSeq LT libraries (Illumina, Inc. San Diego, CA), and sequenced on two Illumina NextSeq500 runs.
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bioRxiv - Genomics 2021Quote: ... 11 kb and 13 kb) were prepared following Nextera protocol (Nextera Mate Pair sample preparation kit, Illumina). Each library was sequenced using 100 base-length read chemistry on a paired-end flow cell on the Illumina HiSeq2000 (Illumina ...
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bioRxiv - Microbiology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003). The Mi-Seq separates all sequencing data by sample during post-run processing using recognised barcoded indices to generate FASTAQ files ...
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bioRxiv - Molecular Biology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003). The MiSeq separated all sequences by sample during post-run processing by recognised indices and to generate FASTQ files.
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bioRxiv - Evolutionary Biology 2019Quote: ... MS-103-2003) at a concentration of 15 nM with addition 25% Phix Control v3 (Illumina, FC-11-2003).
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bioRxiv - Genetics 2020Quote: ... MS-103-2003) at a concentration of 15 nM with addition of 15% Phix control v3 (Illumina, FC-11-2003). The Illumina Mi-Seq post-run processing uses the barcoded indices to split all sequences by sample and generate FASTQ files ...
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bioRxiv - Genetics 2021Quote: ... 3) SpliceAI (SAI)11 scores were retrieved using a script adapted from the SAI github repository (https://github.com/Illumina/SpliceAI) which allows spliceAI to score custom sequences ...
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bioRxiv - Genetics 2020Quote: ... Libraries that passed quality checks were then subjected to deep sequencing (8-47 × genome coverage; 19 × mean coverage, 11 × median coverage) by HiSeq 2500 (Illumina) or NovaSeq 6000 platforms (Illumina).
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bioRxiv - Genetics 2020Quote: ... MS-103-2003) at a concentration of 15nM with the addition of 15% Phix Control v3 (Illumina, FC-11-2003) previously described by Shaukat et al ...