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Citations for Illumina :
1 - 50 of 112 citations for Brucella Blood Agar with Hemin and Vitamin K 15x100mm plate 26ml fill since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2022Quote: ... K-mers from Illumina read data were counted ...
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bioRxiv - Genomics 2020Quote: ... Erroneous k-mers from Illumina paired-end reads were removed using rCorrector [91] ...
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bioRxiv - Genomics 2021Quote: ... K-mer based analysis from Illumina sequencing data derived from the Rothamsted population also indicated a genome size from 3,400 Mb to 3,550 Mb ...
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bioRxiv - Genomics 2024Quote: ... To calculate k-mer distributions from Illumina 150PE sequenced (see below ...
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bioRxiv - Genomics 2020Quote: ... so k-mers were collected later from Illumina whole genome sequencing reads instead ...
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bioRxiv - Genomics 2023Quote: ... a 51-bp k-mer matrix from Illumina paired raw reads of 136 lablab accessions was created using Jellyfish (v ...
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bioRxiv - Genomics 2024Quote: ... using parental k-mer databases created from Illumina reads with meryl v1.3 ...
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bioRxiv - Genomics 2021Quote: ... First a k-mer profile was generated from Illumina reads using jellyfish 2.3.0 tools (Marçais & Kingsford 2011 ...
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bioRxiv - Plant Biology 2021Quote: ... a K-mer frequency distribution was generated from Illumina 2×150 bp paired reads (described below ...
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bioRxiv - Genetics 2024Quote: ... the Feline 63 K SNP genotyping array (28) (Illumina), to investigate the effects of genetic testing on the entire genome ...
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bioRxiv - Genomics 2022Quote: Blood DNA methylation profiles (Illumina 450k array) from six groups of monozygotic twin pairs were analysed.
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bioRxiv - Genomics 2024Quote: Applying K-mer-based techniques to Illumina short reads from Illumina sequencing libraries allowed us to estimate the genome’s size ...
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bioRxiv - Genomics 2022Quote: ... The variants were filtered with Merfin using k-mers derived from Illumina short reads ...
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bioRxiv - Genomics 2021Quote: ... and a similar k-mer distribution pattern to GenomeScope2 (performed with Illumina PE reads). Additionally ...
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bioRxiv - Genomics 2023Quote: Genome size was estimated by K-mer (17-mer) analysis using reads generated by Illumina Hiseq sequencing according to Lander-waterman theory ...
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bioRxiv - Molecular Biology 2024Quote: ... Genome-wide DNA methylation patterns were evaluated by Infinium Human Methylation 850 K BeadChips (Illumina), which determine the methylation levels of 853,307 CpG sites ...
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bioRxiv - Genomics 2022Quote: ... The current study involved measurement of blood DNA methylation by Illumina Methylation EPIC Bead Chips (EPIC array ...
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bioRxiv - Genetics 2024Quote: Blood DNAm was profiled using the Infinium MethylationEPIC BeadChip (Illumina Inc.) in two sample sets from GS ...
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bioRxiv - Molecular Biology 2023Quote: ... K-mer filtering (which removes reads with a 31-mer match to an Illumina spike-in), and Entropy filtering (>0.90 ...
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bioRxiv - Genomics 2023Quote: ... this filter step used both germline blood sequencing and standard fidelity (Illumina) tumor sequencing to focus the analysis on low-level mosaic calls.
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bioRxiv - Genetics 2024Quote: Blood DNAm was profiled using the same Infinium MethylationEPIC BeadChip (Illumina Inc.) as used by GS ...
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bioRxiv - Genomics 2023Quote: ... (Marçais and Kingsford, 2011) and Genomescope (v2.0) (max k-mer coverage = 1,000,000) (Ranallo-Benavidez et al., 2020) from Illumina short reads ...
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bioRxiv - Genetics 2023Quote: We used an SNP-genotyping array (Canine 230 K Consortium BeadChip Array, Illumina, San Diego, CA, USA) to investigate the effects of genetic testing on the whole genome ...
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bioRxiv - Microbiology 2024Quote: ... anchor plate (Illumina, #20040899), and DNA/RNA UD indexes set (Illumina ...
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bioRxiv - Genomics 2024Quote: Whole blood DNA methylation was profiled using the Infinium MethylationEPIC BeadChip (Illumina Inc.) in two sets of GS participants at two separate times by the Wellcome Trust Clinical Research Facility ...
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bioRxiv - Genomics 2024Quote: ... we employed a pipeline that uses Meryl (v1.0) to count the k-mers of length 21 from Illumina reads using the following command: We then used Merqury (v1.1)74 ...
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bioRxiv - Genomics 2020Quote: The genome size was estimated using the k-mer histogram method with Kmergenie v1.7051 (Chikhi and Medvedev 2014) from Illumina data.
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bioRxiv - Microbiology 2020Quote: ... RNA was rRNA depleted with Ribo-Zero ScriptSeq Complete Gold (Blood) (Illumina, San Diego, CA) and sequencing libraries were constructed using the TruSeq Stranded Total RNA kit (Illumina) ...
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bioRxiv - Genetics 2023Quote: ... DNA was extracted from whole blood using MasterPure DNA Purification Kit (Biozym, Illumina Inc, USA). DNA quality and quantity estimation was done by agarose gel electrophoresis and spectrophotometry ...
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bioRxiv - Genomics 2020Quote: DNA methylation was assessed genome-wide from peripheral blood with commercial arrays from Illumina (CA, USA). The Infinium MethylationEPIC BeadChip ...
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bioRxiv - Genetics 2023Quote: ... Libraries from blood samples were sequenced as paired end 100bp reads on an Illumina NovaSeq6000 (Illumina), whereas libraries from cerebellum samples were sequenced as paired-end 68 bp reads on a HiSeq2000 (Illumina) ...
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bioRxiv - Genomics 2023Quote: ... variant calls were used in this step from both germline blood sequencing and standard fidelity (Illumina) tumor sequencing to focus the analysis on low-level mosaic calls.
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bioRxiv - Cancer Biology 2024Quote: ... the patient’s peripheral blood mononuclear cells were sequenced and genotyped with the HumanOmni2.5-8v1 array (Illumina) by Personal Genome Diagnostics ...
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bioRxiv - Microbiology 2022Quote: Short read sequencing from blood culture broth extractions utilised the Nextera DNA Flex Library Prep Kit (Illumina), with a modification of the starting input of 5 μL gDNA with samples >20 ng/μL ...
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bioRxiv - Microbiology 2021Quote: A total of 390 out of 405 animals were genotyped using the Porcine 70 k GGP Porcine HD Array (Illumina, San Diego, CA) containing 68,516 single nucleotide polymorphisms (SNPs) ...
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bioRxiv - Developmental Biology 2024Quote: ... and TruSeq RNA CD Index Plate (Illumina, USA) for sample multiplexing ...
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bioRxiv - Physiology 2024Quote: ... and TruSeq RNA CD Index plate (Illumina, 20019792), according to the manufacturer’s protocol ...
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bioRxiv - Neuroscience 2024Quote: ... DNA was prepared using QIAGEN DNeasy Blood & Tissue kit and processed by the Infinium global screening array (Illumina). CNV calling was performed using the iPsychCNV package in R (http://biopsych.dk/iPsychCNV) ...
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bioRxiv - Genomics 2020Quote: ... or homogenized tissues were digested with proteinase K prior to DNA isolation using MasterPure™ DNA Purification Kit (Epicentre, by Illumina, Madison, United States) according to manufacturer’s instructions.
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bioRxiv - Neuroscience 2020Quote: ... nDNA was extracted from whole blood and genotyped on Illumina GWAS arrays for ADNI1 (Illumina Human 610-Quad BeadChip), ADNI GO/2 participants (Illumina HumanOmniExpress BeadChip) ...
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bioRxiv - Genomics 2020Quote: ... using the 96-well plate Nextera indexing primers (Illumina), according to the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2023Quote: ... using either single or dual index plates (Illumina 20028313), with a 1% PhiX control library spiked in ...
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bioRxiv - Developmental Biology 2024Quote: ... using either single or dual index plates (Illumina 20028313), with a 1% PhiX control library spiked in ...
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bioRxiv - Cancer Biology 2021Quote: ... Tumor DNA was isolated using the Qiagen Blood and Tissue Kit and sgRNA cassette was amplified similarly to the in vitro screen and analyzed by Illumina sequencing ...
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bioRxiv - Genomics 2020Quote: Peripheral blood DNA genotypes were obtained for 238 subjects using Infinium Multi-Ethnic Global-8 Kit (Illumina, San Diego, CA) and processed with GenomeStudio software ...
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bioRxiv - Microbiology 2020Quote: DNA were extracted by QIAGEN DNeasy Blood and Tissue Kit and sequencing libraries were prepared using the Nextera XT kit and sequenced on a MiSeq (Illumina) using v3 reagents with 2 × 300 cycles ...
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bioRxiv - Genetics 2023Quote: ... Plasma was divided from maternal peripheral blood (5[mL) by centrifuging and then 600[μL (Ion Torrent) or 1.4 mL (Illumina CN500) plasma was used to extract cell-free DNA ...
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bioRxiv - Genomics 2024Quote: Genomic DNA extracted from nucleated blood cells was utilized for library construction using a Nextera Mate Pair Library Preparation kit from Illumina, following the gel-free protocol provided by the manufacturer ...
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bioRxiv - Genetics 2020Quote: ... Plates were multiplexed and sequenced on the MiSeq platform (Illumina) using 250 bp paired-end reads (Nano kit ...
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bioRxiv - Immunology 2022Quote: ... PCR amplification was performed in a 48 well plate (Illumina) on an Eco machine (Illumina) ...