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Citations for Illumina :
1 - 50 of 175 citations for Annexin V Solution APC since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... and 0.2x (v/v) TB1 (Illumina Inc.). The nuclear pellet was resuspended with an additional 30 μl of loading buffer ...
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bioRxiv - Microbiology 2021Quote: ... with 5% (v/v) 20 pM PhiX (Illumina), using 150 cycle v3 cartridges ...
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bioRxiv - Molecular Biology 2022Quote: ... 5% v/v TDE1 Tagment DNA Enzyme (Illumina, Cambridge, UK) in nuclease free water (Sigma ...
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bioRxiv - Physiology 2024Quote: ... supplemented with 5% v/v TDE1 Tagment DNA Enzyme (Illumina, Cambridge, UK) in nuclease free water (Sigma ...
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bioRxiv - Developmental Biology 2024Quote: ... BCLconvert v 3.9.3 (Illumina) and bases2fastq v1.8.0 (Element Biosciences ...
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bioRxiv - Developmental Biology 2024Quote: ... BCLconvert v 3.9.3 (Illumina) was used to demultiplex reads ...
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bioRxiv - Cancer Biology 2020Quote: ... Data were processed using the Genotyping module (v.1.9.4) in GenomeStudio v.2011.1 (Illumina) to calculate B-allele frequencies (BAF ...
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bioRxiv - Cell Biology 2020Quote: ... and D (v.2, Illumina) and sequenced on HiSeq4000 and NovaSeq6000 (Illumina ...
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bioRxiv - Neuroscience 2022Quote: ... with a 20% v/v PhiX Control v3 spike-in (Illumina, Cat. No. FC-110-3001) and sequenced on Illumina’s NovaSeq 6000 ...
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bioRxiv - Immunology 2023Quote: ... 10% v/v dimethylformamide) containing 1 μl Tagment DNA Enzyme (Nextera DNA Sample Prep Kit (Illumina)) ...
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bioRxiv - Microbiology 2020Quote: ... The final libraries were multiplexed and 20% (v/v) PhiX control DNA (Illumina, Catalog # FC-110-3001) per lane and were sequenced using an Illumina HiSeq 2500 Rapid Run (150 bp ...
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bioRxiv - Genomics 2021Quote: ... 0.05 μL 10% v/v Tween and 2.5 μL TDE1 enzyme (Illumina, San Diego CA, Catalog #20034198). Tagmented DNA was purified with Zymo DNA clean & concentrator-5 kit (Zymo Research #D4013) ...
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bioRxiv - Cancer Biology 2023Quote: ... A NovaSeq S1 v 1.5 or SP v 1.5 Reagent Kit (100 cycles) (Illumina, 20028319 and 20028401) was used ...
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bioRxiv - Genomics 2023Quote: ... and Flye v.2.7.1 assemblers from Illumina short-reads ...
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bioRxiv - Developmental Biology 2021Quote: ... 10%(v/v) N,N-dimethyl formamide) and 1 μl of Tagment DNA Enzyme from Nextera Sample Preparation Kit (Illumina) were added to the DNA-beads complex and incubated for 70 sec at 37 °C ...
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bioRxiv - Genomics 2023Quote: ... The PhiX Control library was spiked in the sequencing sample at 10% (v/v) (Illumina, cat. no. FC-110-3001).
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bioRxiv - Physiology 2024Quote: ... Pellets (nuclei fractions) were resuspended in transposition buffer (50% v/v 2X Tagment DNA (TD) Buffer (Illumina, 336 Cambridge, UK), 32% v/v PBS ...
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bioRxiv - Systems Biology 2023Quote: ... the final library was diluted to 20 nM with HT1 buffer and PhiX control v3 (20%, v/v) and 600 µL was loaded onto a MiSeq v2 (500 cycles) reagent cartridge (Illumina). The resulting sequences were uploaded to Illumina Sequence Hub and downloaded using BaseSpace Sequence Hub Downloader (Illumina).
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bioRxiv - Genomics 2022Quote: ... Reads were trimmed with Trimmomatic (v 0.39, ILLUMINA-CLIP to remove adaptors ...
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bioRxiv - Immunology 2024Quote: ... using the TruSeq SBS Kit v.3 (Illumina). An average of 75 million paired reads was generated per sample.
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bioRxiv - Systems Biology 2020Quote: ... Final loading concentration of 1.8 pM and 1% PhiX (v/v) was used with the NextSeq® 500/550 High Output Kit v2 (150 cycles) (Illumina). Samples were sequenced paired-end with 75 cycles and single index of 6 cycles.
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bioRxiv - Immunology 2020Quote: ... Final loading concentration of 1.7 pM and 1% (v/v) PhiX was used with the NextSeq® 500/550 High Output Kit v2 (150 cycles) (Illumina Samples were sequenced paired-end with 75 cycles of each read and single index of 6 cycles.
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bioRxiv - Molecular Biology 2022Quote: ... The supernatant was discarded and the pellet (cell nuclei) was resuspended in 50 uL transposition mix (50% v/v 2X Tagment DNA (TD) Buffer (Illumina, Cambridge, UK), 32% v/v PBS ...
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bioRxiv - Microbiology 2022Quote: ... and subsequently assembled using either SPAdes v 3.13.1 (Illumina) or Unicycler v 0.4.9 (ONT MinION) ...
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bioRxiv - Microbiology 2020Quote: The libraries were demultiplexed with CASAVA v.1.8 (Illumina) and deposited at Genbank’s Sequence Read Archive under the numbers SAMN5464651 through SAMN5464666 (Supplementary Table 2) ...
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bioRxiv - Microbiology 2023Quote: ... The diluted library was combined with the subsequent PhiX control v3 (20%, v/v) and loaded onto a MiSeq v2 (500 cycles) reagent cartridge (Illumina, Carlsbad, CA, USA). The resulting sequences were uploaded to BaseSpace (Illumina ...
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bioRxiv - Neuroscience 2023Quote: ... Raw sequencing data was demultiplexed with bcl2fastq2 v.2.20 (Illumina) followed by Tn5 transposon adapter sequences trimming with Cutadapt106 ...
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bioRxiv - Cancer Biology 2023Quote: ... we dispensed 600 nL of tagmentation reaction mix containing Tagmentation DNA buffer (TD) and Amplicon Tagment Mix (ATM) at 2:1 v/v ratio (Nextera kit, Illumina, cat. no. FC-131-1096) into each well and performed tagmentation at 55° C for 5 min followed by hold at 4° C in a PCR thermocycler ...
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bioRxiv - Microbiology 2020Quote: ... Base-calling was carried out with “bcl2fastq” software (v.2.17.1.14, Illumina). Paired-end reads were further analyzed in CLC Genomics Workbench Tool 9.5.1 ...
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bioRxiv - Microbiology 2021Quote: ... Data was demultiplexed using bcl2fastq2 v.20 (Illumina, San Diego, CA).
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bioRxiv - Microbiology 2022Quote: ... Using the TruSeq RNA Sample Library Preparation v.2 kit (Illumina), RNA was fragmented into small pieces using divalent cations under elevated temperature ...
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bioRxiv - Cell Biology 2020Quote: ... and hybridized on Illumina whole-genome HumanHT-12 v 4.0 chip (Illumina). Acquisition and data analysis were performed as previously described14 ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing libraries were prepared with MiSeq reagent kit v.2 (Illumina, USA), targeting mainly dsDNA viruses ...
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bioRxiv - Evolutionary Biology 2020Quote: ... using 300-cycle kit (v.3, Illumina, Inc., San Diego, CA, USA) to obtain 150 bp paired-end reads.
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bioRxiv - Microbiology 2020Quote: ... NGS sequencing was accomplished using MiSeq v.3 2×75 chemistry (Illumina). Raw sequencing files were demultiplexed using IlluminaBasecallsToFasq procedure from PICARD package and mapped to NC_055512.2 SARS-CoV-2 reference sequence with BwaAndMarkDuplicatesPipelineSpark procedure from GATK v.4.1.5.0 package (Broad Institute ...
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bioRxiv - Evolutionary Biology 2021Quote: Sequencing data were demultiplexed using the Bcl2Fastq Conversion Software (v. 2.20, Illumina). Raw sequences were adapter- and quality-trimmed with Trimmomatic (v ...
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bioRxiv - Microbiology 2020Quote: ... Reads were trimmed (Trimmomatic v0.33) (63) after demultiplexing (bcl2fastq v.2.15.0, Illumina) to remove adaptor sequences ...
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bioRxiv - Genetics 2021Quote: ... 371 cows were genotyped with BovineSNP50 v.2.0 array (Illumina Ca. USA). In the first quality control step ...
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bioRxiv - Molecular Biology 2020Quote: ... After initial data processing by the MiSeq Control Software v 2.6 (Illumina), base calls were extracted and further analyzed by a set of homemade scripts detailed in Supplementary Methods ...
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bioRxiv - Neuroscience 2023Quote: ... Sequencing data were demultiplexed using the bcl2fastq2 Conversion Software (v. 2.20, Illumina), and primary data analysis was performed with the Cell Ranger Gene Expression pipeline (version 3.1.0 ...
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bioRxiv - Genomics 2023Quote: ... the Illumina TruSeq RNA sample preparation kit v.2 (Illumina, CA, USA) was used for library preparation following the low-throughput protocol ...
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bioRxiv - Immunology 2024Quote: ... Sequencing data were demultiplexed using the bcl2fastq2 Conversion Software (v. 2.20, Illumina) and primary data analysis performed with the Cell Ranger Gene Expression pipeline (version 7.1.0 ...
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bioRxiv - Cancer Biology 2024Quote: ... The chromosome copy number analysis was performed in GenomeStudio v.2.0 (Illumina) by using the cnvPartition v.3.2.1 plugin ...
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bioRxiv - Cancer Biology 2024Quote: ... Sequencing data were demultiplexed using the bcl2fastq2 Conversion Software (v. 2.20, Illumina) and primary data analysis performed with the Cell Ranger Gene Expression pipeline (v.6.0.0 for BCC6 and BCC7 and v.7.1.0 for Baseline1/2 ...
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bioRxiv - Cancer Biology 2024Quote: ... samples were hybridized to Human HT-12 V.4.0 BeadChip arrays (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2020Quote: ... De-multiplexing of RNA-Seq reads was conducted using bcl2fastq v.2 (Illumina). Both DNA-Seq and RNA-Seq reads were submitted to FastQC 51 for quality validation.
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bioRxiv - Genetics 2021Quote: ... SNPs were called using GenomeStudio software V.2011.1 (Illumina, Inc. San Diego, CA) and the physical positions of the SNPs were determined by using the IT97K-499-35 reference genome v1.0 (Lonardi et al. ...
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bioRxiv - Cell Biology 2021Quote: ... LT-PTC and pUC using TruSeq mRNA sample prep kit v.2 (Illumina). Sequence alignment and RNA-Seq analysis ...
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bioRxiv - Genomics 2021Quote: ... The data were demultiplexed and converted to fastq using bcl2fastq2 v.2.20 (Illumina). Illumina data underwent QC with MultiQC v.1.5 (Ewels et al ...
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bioRxiv - Immunology 2020Quote: ... Single-cell TCR V(D)J libraries were sequenced with HiSeq2500 machine (Illumina). All sequencing was done according to the manufacturer’s specification (10X Genomics).