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Citations for Illumina :
1 - 50 of 491 citations for Alpha Cyclodextrin Solution 5% w v since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2021Quote: ... with 5% (v/v) 20 pM PhiX (Illumina), using 150 cycle v3 cartridges ...
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bioRxiv - Molecular Biology 2022Quote: ... 5% v/v TDE1 Tagment DNA Enzyme (Illumina, Cambridge, UK) in nuclease free water (Sigma ...
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bioRxiv - Physiology 2024Quote: ... supplemented with 5% v/v TDE1 Tagment DNA Enzyme (Illumina, Cambridge, UK) in nuclease free water (Sigma ...
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bioRxiv - Developmental Biology 2024Quote: ... The pellet was resuspended in transposition solution containing 5 μL TDE1 (Illumina, 15027865) 25 μL 2x buffer (Illumina ...
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bioRxiv - Genomics 2023Quote: ... and 0.2x (v/v) TB1 (Illumina Inc.). The nuclear pellet was resuspended with an additional 30 μl of loading buffer ...
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bioRxiv - Developmental Biology 2024Quote: ... BCLconvert v 3.9.3 (Illumina) and bases2fastq v1.8.0 (Element Biosciences ...
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bioRxiv - Developmental Biology 2024Quote: ... BCLconvert v 3.9.3 (Illumina) was used to demultiplex reads ...
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bioRxiv - Immunology 2024Quote: ... The 5’ expression library and the V(D)J library were sequenced with NovaSeq 6000 S1 (100 cycles) (Illumina, cat. 20012865).
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bioRxiv - Cancer Biology 2020Quote: ... Data were processed using the Genotyping module (v.1.9.4) in GenomeStudio v.2011.1 (Illumina) to calculate B-allele frequencies (BAF ...
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bioRxiv - Cell Biology 2020Quote: ... and D (v.2, Illumina) and sequenced on HiSeq4000 and NovaSeq6000 (Illumina ...
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bioRxiv - Neuroscience 2022Quote: ... with a 20% v/v PhiX Control v3 spike-in (Illumina, Cat. No. FC-110-3001) and sequenced on Illumina’s NovaSeq 6000 ...
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bioRxiv - Immunology 2023Quote: ... 10% v/v dimethylformamide) containing 1 μl Tagment DNA Enzyme (Nextera DNA Sample Prep Kit (Illumina)) ...
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bioRxiv - Microbiology 2020Quote: ... The final libraries were multiplexed and 20% (v/v) PhiX control DNA (Illumina, Catalog # FC-110-3001) per lane and were sequenced using an Illumina HiSeq 2500 Rapid Run (150 bp ...
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bioRxiv - Genomics 2021Quote: ... 0.05 μL 10% v/v Tween and 2.5 μL TDE1 enzyme (Illumina, San Diego CA, Catalog #20034198). Tagmented DNA was purified with Zymo DNA clean & concentrator-5 kit (Zymo Research #D4013) ...
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bioRxiv - Cancer Biology 2023Quote: ... A NovaSeq S1 v 1.5 or SP v 1.5 Reagent Kit (100 cycles) (Illumina, 20028319 and 20028401) was used ...
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bioRxiv - Genomics 2023Quote: ... and Flye v.2.7.1 assemblers from Illumina short-reads ...
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bioRxiv - Bioengineering 2024Quote: CROP-Seq plasmid, Day6, and Day14 gRNA amplicon libraries (ALPHA, BETA, GAMMA) were sequenced on NovaSeq X Sequencer (Illumina). FATSQs files were analyzed using the MAGeCK python package for computing enrichment and depletion to the plasmid libraries at the gRNA and gene levels96 ...
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bioRxiv - Developmental Biology 2021Quote: ... 10%(v/v) N,N-dimethyl formamide) and 1 μl of Tagment DNA Enzyme from Nextera Sample Preparation Kit (Illumina) were added to the DNA-beads complex and incubated for 70 sec at 37 °C ...
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bioRxiv - Genomics 2023Quote: ... The PhiX Control library was spiked in the sequencing sample at 10% (v/v) (Illumina, cat. no. FC-110-3001).
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bioRxiv - Physiology 2024Quote: ... Pellets (nuclei fractions) were resuspended in transposition buffer (50% v/v 2X Tagment DNA (TD) Buffer (Illumina, 336 Cambridge, UK), 32% v/v PBS ...
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bioRxiv - Systems Biology 2023Quote: ... the final library was diluted to 20 nM with HT1 buffer and PhiX control v3 (20%, v/v) and 600 µL was loaded onto a MiSeq v2 (500 cycles) reagent cartridge (Illumina). The resulting sequences were uploaded to Illumina Sequence Hub and downloaded using BaseSpace Sequence Hub Downloader (Illumina).
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bioRxiv - Genomics 2022Quote: ... Reads were trimmed with Trimmomatic (v 0.39, ILLUMINA-CLIP to remove adaptors ...
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bioRxiv - Immunology 2024Quote: ... using the TruSeq SBS Kit v.3 (Illumina). An average of 75 million paired reads was generated per sample.
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bioRxiv - Systems Biology 2020Quote: ... Final loading concentration of 1.8 pM and 1% PhiX (v/v) was used with the NextSeq® 500/550 High Output Kit v2 (150 cycles) (Illumina). Samples were sequenced paired-end with 75 cycles and single index of 6 cycles.
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bioRxiv - Immunology 2020Quote: ... Final loading concentration of 1.7 pM and 1% (v/v) PhiX was used with the NextSeq® 500/550 High Output Kit v2 (150 cycles) (Illumina Samples were sequenced paired-end with 75 cycles of each read and single index of 6 cycles.
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bioRxiv - Molecular Biology 2022Quote: ... The supernatant was discarded and the pellet (cell nuclei) was resuspended in 50 uL transposition mix (50% v/v 2X Tagment DNA (TD) Buffer (Illumina, Cambridge, UK), 32% v/v PBS ...
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bioRxiv - Microbiology 2022Quote: ... and subsequently assembled using either SPAdes v 3.13.1 (Illumina) or Unicycler v 0.4.9 (ONT MinION) ...
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bioRxiv - Microbiology 2020Quote: The libraries were demultiplexed with CASAVA v.1.8 (Illumina) and deposited at Genbank’s Sequence Read Archive under the numbers SAMN5464651 through SAMN5464666 (Supplementary Table 2) ...
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bioRxiv - Microbiology 2023Quote: ... The diluted library was combined with the subsequent PhiX control v3 (20%, v/v) and loaded onto a MiSeq v2 (500 cycles) reagent cartridge (Illumina, Carlsbad, CA, USA). The resulting sequences were uploaded to BaseSpace (Illumina ...
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bioRxiv - Systems Biology 2024Quote: ... 5’ amine-modified DNA oligonucleotides (5’-[AmC6]dUdUdUdUd-[Illumina_adaptor]-[spatial barcode]-[UMI]-[20T]-VN ...
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bioRxiv - Physiology 2023Quote: Standard Argyrosomus regius gonadotropin subunit amino acidic sequences (alpha common, beta-FSH and beta-LH) were deduced from RNAseq (Illumina and Nanopore) analysis of mRNA extracted from meagre pituitaries ...
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bioRxiv - Neuroscience 2023Quote: ... Raw sequencing data was demultiplexed with bcl2fastq2 v.2.20 (Illumina) followed by Tn5 transposon adapter sequences trimming with Cutadapt106 ...
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bioRxiv - Cancer Biology 2023Quote: ... we dispensed 600 nL of tagmentation reaction mix containing Tagmentation DNA buffer (TD) and Amplicon Tagment Mix (ATM) at 2:1 v/v ratio (Nextera kit, Illumina, cat. no. FC-131-1096) into each well and performed tagmentation at 55° C for 5 min followed by hold at 4° C in a PCR thermocycler ...
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bioRxiv - Microbiology 2020Quote: ... Base-calling was carried out with “bcl2fastq” software (v.2.17.1.14, Illumina). Paired-end reads were further analyzed in CLC Genomics Workbench Tool 9.5.1 ...
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bioRxiv - Microbiology 2021Quote: ... Data was demultiplexed using bcl2fastq2 v.20 (Illumina, San Diego, CA).
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bioRxiv - Microbiology 2022Quote: ... Using the TruSeq RNA Sample Library Preparation v.2 kit (Illumina), RNA was fragmented into small pieces using divalent cations under elevated temperature ...
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bioRxiv - Microbiology 2020Quote: ... A 5’-adapter (Illumina) was ligated to the RNA fragments with T4 RNA ligase (Promega) ...
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bioRxiv - Genomics 2023Quote: ... 5 uL H2O) (Illumina Tagment DNA Enzyme and Buffer Small Kit ...
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bioRxiv - Genomics 2024Quote: ... 5 uL H2O) (Illumina Tagment DNA Enzyme and Buffer Small Kit ...
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bioRxiv - Cancer Biology 2024Quote: ... 100 ng of RNA was used for library preparation with ILMN Strnd Total RNA Lig w/RBZ+ (Illumina). Libraries were sequenced on NovaSeq Illumina platform ...
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bioRxiv - Cell Biology 2020Quote: ... and hybridized on Illumina whole-genome HumanHT-12 v 4.0 chip (Illumina). Acquisition and data analysis were performed as previously described14 ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing libraries were prepared with MiSeq reagent kit v.2 (Illumina, USA), targeting mainly dsDNA viruses ...
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bioRxiv - Evolutionary Biology 2020Quote: ... using 300-cycle kit (v.3, Illumina, Inc., San Diego, CA, USA) to obtain 150 bp paired-end reads.
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bioRxiv - Microbiology 2020Quote: ... NGS sequencing was accomplished using MiSeq v.3 2×75 chemistry (Illumina). Raw sequencing files were demultiplexed using IlluminaBasecallsToFasq procedure from PICARD package and mapped to NC_055512.2 SARS-CoV-2 reference sequence with BwaAndMarkDuplicatesPipelineSpark procedure from GATK v.4.1.5.0 package (Broad Institute ...
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bioRxiv - Evolutionary Biology 2021Quote: Sequencing data were demultiplexed using the Bcl2Fastq Conversion Software (v. 2.20, Illumina). Raw sequences were adapter- and quality-trimmed with Trimmomatic (v ...
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bioRxiv - Microbiology 2020Quote: ... Reads were trimmed (Trimmomatic v0.33) (63) after demultiplexing (bcl2fastq v.2.15.0, Illumina) to remove adaptor sequences ...
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bioRxiv - Genetics 2021Quote: ... 371 cows were genotyped with BovineSNP50 v.2.0 array (Illumina Ca. USA). In the first quality control step ...
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bioRxiv - Molecular Biology 2020Quote: ... After initial data processing by the MiSeq Control Software v 2.6 (Illumina), base calls were extracted and further analyzed by a set of homemade scripts detailed in Supplementary Methods ...
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bioRxiv - Neuroscience 2023Quote: ... Sequencing data were demultiplexed using the bcl2fastq2 Conversion Software (v. 2.20, Illumina), and primary data analysis was performed with the Cell Ranger Gene Expression pipeline (version 3.1.0 ...
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bioRxiv - Genomics 2023Quote: ... the Illumina TruSeq RNA sample preparation kit v.2 (Illumina, CA, USA) was used for library preparation following the low-throughput protocol ...