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Citations for Illumina :
1 - 50 of 201 citations for 4 Nitrophenyl beta D glucuronic acid sodium salt since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2021Quote: ... beta values from Illumina HumanMethylation27 (HM27 ...
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bioRxiv - Physiology 2023Quote: Standard Argyrosomus regius gonadotropin subunit amino acidic sequences (alpha common, beta-FSH and beta-LH) were deduced from RNAseq (Illumina and Nanopore) analysis of mRNA extracted from meagre pituitaries ...
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bioRxiv - Pharmacology and Toxicology 2020Quote: ... version 2.0.1.[48] Proportions of methylation values (Illumina “Beta” scale) were calculated ...
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bioRxiv - Genomics 2021Quote: Beta values were generated from raw intensity signals using GenomeStudio software (Illumina) and exported into R 3.6 for data analysis ...
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bioRxiv - Microbiology 2023Quote: ... C and D (Illumina). Amplicon concentration across samples was normalized to 200 ng/μl using the Qubit high sensitivity dsDNA assay before pooling ...
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bioRxiv - Bioengineering 2024Quote: ... To extract all DNA methylation beta values for the 102 nt BCAT1 promoter measured by Illumina EPIC array ...
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bioRxiv - Cancer Biology 2021Quote: ... Beta-values were calculated from the retransformed intensities using an offset of 100 (as recommended by Illumina). All samples were checked for duplicates by pairwise correlation of the genotyping probes on the 450k/EPIC array ...
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bioRxiv - Cancer Biology 2020Quote: ... Beta-values were calculated from the retransformed intensities using an offset of 100 (as recommended by Illumina). All samples were checked for duplicates by pairwise correlation of the genotyping probes on the 450k/850k array ...
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bioRxiv - Cancer Biology 2023Quote: ... We used the pan-cancer batch-corrected normalized gene expression and beta values for methylation from Illumina’s HumanMethylation450 BeadChip ...
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bioRxiv - Cell Biology 2023Quote: ... beta values were calculated from the retransformed intensities using an offset of 100 (as recommended by Illumina). Out of 865,859 probes on the EPIC array ...
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bioRxiv - Cell Biology 2020Quote: ... and D (v.2, Illumina) and sequenced on HiSeq4000 and NovaSeq6000 (Illumina ...
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bioRxiv - Cancer Biology 2021Quote: ... Beta-values were calculated from the back-transformed intensities using an offset of 100 (as recommended by Illumina). Filtering of CpG probes was performed as described in Capper et al ...
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bioRxiv - Genomics 2024Quote: ... The comparison of beta values with the existing genotype data (assessed using Global Screening Arrays [GSA+MD-24v3.0-Psych-24v1.1, Illumina, San Diego ...
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bioRxiv - Microbiology 2022Quote: ... Set D (Illumina, San Diego, USA). The sequences of the four sets of primers used during library preparation (limited cycle PCR ...
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bioRxiv - Microbiology 2023Quote: ... Revision D (Illumina, San Diego, CA) beginning with the Repair Ends step (q.s ...
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bioRxiv - Bioengineering 2024Quote: CROP-Seq plasmid, Day6, and Day14 gRNA amplicon libraries (ALPHA, BETA, GAMMA) were sequenced on NovaSeq X Sequencer (Illumina). FATSQs files were analyzed using the MAGeCK python package for computing enrichment and depletion to the plasmid libraries at the gRNA and gene levels96 ...
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bioRxiv - Molecular Biology 2020Quote: ... An additional QC measure to determine the concordance of average beta values generated for seven duplicate samples was completed using GenomeStudio (Illumina) v1.8 ...
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bioRxiv - Cancer Biology 2022Quote: All 450K array methylation level files were downloaded (Data Type: “Methylation beta value”, Platform: “Illumina Human Methylation 450”; n = 507). The average CpG methylation level over DMRs identified in this study and GENCODE transcript promoters was calculated in all TCGA LUAD and matched normal samples ...
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bioRxiv - Microbiology 2021Quote: ... B and D (Illumina, San Diego, CA). With a final reaction volume of 50 μL ...
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bioRxiv - Synthetic Biology 2022Quote: ... and Nextera XT index kit D (Illumina). Amplicon sizes were verified on a Tapestation using the High Sensitivity D1000 Screentape (Agilent) ...
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bioRxiv - Molecular Biology 2021Quote: ... The index sequences were defined by the combination of primers with TruSeq HT index 1 (D 7xx) and TruSeq HT index 2 (D 5xx) (Illumina). Index PCR was performed using KAPA HiFi HS ReadyMix (Kapa Biosystems ...
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bioRxiv - Genomics 2020Quote: ... 64 RNA-Seq libraries (4 time points x 4 tissues x 4 biological replicates) were prepared using the TruSeq RNA Sample Preparation Kit (Illumina). Libraries were sequenced on Illumina Nova-Seq 6000 sequencing platform at the Australian Genome Research Facility (AGRF ...
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bioRxiv - Pathology 2024Quote: ... aphidicola (C, D) based on SNPs identified from Illumina sequencing ...
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bioRxiv - Microbiology 2021Quote: ... 4) DC3000 + B (Illumina only), 5 ...
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bioRxiv - Immunology 2021Quote: ... Group 4 (French European, Illumina), Group 5 (North American ...
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bioRxiv - Bioengineering 2024Quote: ... and 4 µL Nextera (Illumina). The reaction was stopped with 1% SDS and incubated at 72C for 10 minutes ...
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bioRxiv - Cell Biology 2022Quote: ... The Nextera XT Index Kit v2 Sets A-D (Illumina) barcodes were used for the amplified sequencing libraries and the quality of libraries was assessed using a Qubit fluorometer (ThermoFisher Scientific ...
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bioRxiv - Neuroscience 2020Quote: ... Sample indexing was performed using index sets A and D (Illumina). At this point ...
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bioRxiv - Microbiology 2023Quote: ... Barcodes of the Illumina NexteraTM DNA UD index set A-D (Illumina) were diluted 1:5 prior to the library amplification ...
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bioRxiv - Systems Biology 2021Quote: ... Libraries were then pooled in groups of 4 and sequenced on 4 lanes on a NextSeq500 sequencer (Illumina) using 10X Genomics recommended reads configuration.
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bioRxiv - Immunology 2020Quote: ... Single-cell TCR V(D)J libraries were sequenced with HiSeq2500 machine (Illumina). All sequencing was done according to the manufacturer’s specification (10X Genomics).
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bioRxiv - Cancer Biology 2023Quote: ... and V(D)J-enriched libraries were sequenced on a NextSeq 550 (Illumina).
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bioRxiv - Genomics 2024Quote: ... using IDT for Illumina – Nextera DNA UD Indexes Sets A-D (Illumina, USA). Fragmentation times and amplification cycles were performed according to the ranges recommended by the manufacturer ...
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bioRxiv - Microbiology 2021Quote: ... UK). Libraries were prepared from 8 samples (4× T. brucei, 4× T. congolense) using the TruSeq Stranded mRNA kit (Illumina) and 2 × 75 bp paired-end sequencing was carried out using a HiSeq 4000 system (Illumina) ...
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bioRxiv - Cancer Biology 2021Quote: ... Barcoded libraries of ten samples (4 treated, 4 untreated and two controls) were equimolarly pooled and sequenced on MiSeq (Illumina) using MiSeq v3 150 reagent kit (MS-102-3001 ...
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bioRxiv - Genomics 2023Quote: ... coverage and eight additional female genomes (4 Asian and 4 African) at ~30× (1 lane of Illumina Hiseq X Ten) coverage using 10x Linked-Reads at HudsonAlpha Institute of Biotechnology ...
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bioRxiv - Genomics 2023Quote: ... 4 washes with PR2 buffer (PR2, Illumina MiSeq), and 6 minute incubation at 60°C with shaking followed by 4 washes was performed a total of 3 times ...
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bioRxiv - Molecular Biology 2022Quote: ... RNA was alcohol precipitated using sodium acetate and glycogen following the protocol from the Ribo-Zero rRNA Removal Kit (Illumina).
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bioRxiv - Genetics 2024Quote: ... DNA was treated with sodium bisulfite and bisulfite-converted DNA was subjected to methylation profiling using Infinium EPIC-850K Array (Illumina). Fluorescence signal intensities were captured using Illumina HiScanSQ.
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bioRxiv - Immunology 2022Quote: ... and BCR enriched V(D)J libraries were sequenced either on a Nextseq500 (Illumina) using a high output 150 cycle flowcell ...
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bioRxiv - Microbiology 2023Quote: ... and IDT® for Illumina® DNA/RNA UD Indexes Set D (Illumina #20042667). Concentrations of 1.8 × AMPure XP magnetic bead purified libraries were measured using Qubit™ 1× dsDNA High Sensitivity Assay Kit (Thermo #Q33231 ...
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bioRxiv - Immunology 2022Quote: ... or NovaSeq XP 4-Lane Kit v1.5 (Illumina, 20043131).
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bioRxiv - Immunology 2022Quote: ... or NovaSeq XP 4-Lane Kit v1.5 (Illumina, 20043131).
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bioRxiv - Immunology 2022Quote: ... or NovaSeq XP 4-Lane Kit v1.5 (Illumina, 20043131).
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bioRxiv - Immunology 2021Quote: ... Both gene expression and V(D)J libraries were sequenced on a Novaseq S4 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell ...
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bioRxiv - Systems Biology 2023Quote: ... Libraries for Study D were prepared with the Nextera XT Library Prep kit (Illumina, USA) and sequenced with a paired-end 2x150bp protocol on a NovaSeq 6000 (Illumina ...
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bioRxiv - Immunology 2022Quote: ... Both gene expression and V(D)J libraries were sequenced on a Novaseq S4 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell ...
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bioRxiv - Microbiology 2024Quote: ... or TCR/BCR V(D)J libraries were sequenced on a NovaSeq sequencing platform (Illumina) with a target of 50,000 read pairs per cell.
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bioRxiv - Immunology 2024Quote: ... Both gene expression and V(D)J libraries were sequenced on a NovaSeq 6000 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell ...
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bioRxiv - Immunology 2024Quote: ... Both gene expression and V(D)J libraries were sequenced on a Novaseq S4 (Illumina), targeting a median sequencing depth of 50,000 and 5,000 read pairs per cell ...