Labshake search
Citations for Illumina :
3951 - 4000 of 10000+ citations for Creatinine Serum Low Sample Volume Kit 384 well Plate since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2024Quote: ... We added a FORMAT (GT) and SAMPLE (0/1) column to the VCF and used hap.py (https://github.com/Illumina/hap.py) to compare the v4.2.1 benchmark VCF and BED (https://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/release/ChineseTrio/HG005_NA24631_son/NISTv4.2.1/GRCh38/) ...
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bioRxiv - Immunology 2024Quote: ... Per-cell gene expression was quantified for each sample using the BaseSpace® SureCellTM RNA Single-Cell Analysis Workflow v1.2.0 from Illumina, which uses Isas v1.2.6-000184develop for analysis ...
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bioRxiv - Neuroscience 2024Quote: ... cDNA libraries were prepared with TruSeq Stranded Total RNA Library Prep with ribosomal RNA depletion for all samples according to the manufacturer’s instructions (Illumina). The quality of the extracted RNA and cDNA at each library preparation step was assessed with Qubit (Invitrogen ...
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bioRxiv - Evolutionary Biology 2024Quote: ... on an Illumina NovaSeq 6000 with an expectation of a minimum number of 1.5 million read pairs per sample. We used Stacks v.2.62 (Catchen et al. 2011, 2013) to build loci from Illumina reads ...
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bioRxiv - Bioengineering 2022Quote: ... The amount of genomic DNA was quantified by a Qubit dsDNA HS Kit (Thermo, Q33230) and prepared for Illumina analysis using the Illumina DNA prep kit (Illumina, 20018704). Illumina sequencing of the spirulina genome was performed on a MiSeq instrument using a MiSeq Reagent Kit v2 (Illumina ...
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bioRxiv - Molecular Biology 2021Quote: ... Adaptor and index primers were added to the sheared DNA fragments using a next-generation sequencing library preparation kit (NEBNext Ultra DNA Library Prep Kit for Illumina; NEB) according to the manufacturer’s instructions ...
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bioRxiv - Genetics 2019Quote: ... The libraries were amplified using the NPM mix (Nextera PCR Master Mix from Nextera DNA Library Prep Kit) and Index adapters i7 and i5 (Nextera Index Kit, Illumina, U.S), according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2021Quote: ... Each Standard Flex library was constructed using all standard kit reagents from the Nextera DNA Flex Library Prep kit (Illumina, USA), following the manufacturer’s protocol ...
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bioRxiv - Microbiology 2021Quote: ... sequencing of the prepared library pools was performed using MiSeq high throughput kit (v3 kit, 600 cycles) with an Illumina MiSeq platform (Illumina, USA).
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bioRxiv - Cell Biology 2021Quote: ... Sequencing libraries were constructed from 1 ng of pre-amplified cDNA using DNA library preparation kit (TruePrep DNA Library Prep Kit V2 for Illumina, Vazyme). Libraries were sequenced on a HiSeq-PE150 ...
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bioRxiv - Microbiology 2020Quote: ... Equimolar pooled library was sequenced on an Illumina MiSeq platform using 2×300bp reagent kit (Miseq reagent kit v3; Illumina Inc.) for paired-end sequencing ...
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bioRxiv - Evolutionary Biology 2022Quote: ... in the DNA Sequencing Section at the Okinawa Institute of Science and Technology Graduate University using HiSeq Rapid SBS Kit v2 kit (500 cycles, Illumina, USA) yielding 250-bp paired-end reads (Fig ...
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bioRxiv - Cancer Biology 2023Quote: ... TruSeq® Stranded Total RNA LT Library Prep Kit or TruSeq Stranded mRNA Library Prep kit (Illumina, San Diego, CA, USA) was used for preparing Strand-specific whole transcriptome sequencing libraries by following the manufacturer’s procedure ...
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bioRxiv - Genomics 2023Quote: ... Total genomic DNA was extracted using the QIAGEN DNAeasy Plant Mini Kit and the Illumina library was prepared using a TruSeq Nano DNA Library kit (Illumina, Inc.). Libraries with an insert size of ∼550 bp were sequenced for a read length of 100 bp in paired-end mode on a HiSeq 4000 at the iGE3 sequencing platform (Geneva ...
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bioRxiv - Cell Biology 2023Quote: ... the first strand cDNA was synthesized using TruSeq stranded total RNA kit and TruSeq stranded mRNA kit (Illumina, San Diego, USA), followed by the second strand cDNA synthesis using dUTP ...
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Human CCR6+ Th cells show both an extended stable gradient of Th17 activity and imprinted plasticitybioRxiv - Immunology 2023Quote: ... The bisulfite-converted DNA samples were then processed for hybridization and staining using either the Illumina Infinium Human Methylation 450 BeadChip Kit or the Illumina Infinium MethylationEPIC BeadChip Kit (Illumina Inc.) according to the manufacturer’s recommendations ...
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bioRxiv - Cancer Biology 2023Quote: ... Single-end sequencing was performed using the library prep kit TruSeq and the sequencing kit NovaSeq6000 SP Flowcell 100 cycles (Illumina, Inc.) for Mus musculus (Ensembl.GRCm38.82) ...
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bioRxiv - Physiology 2023Quote: ... 500 ng total RNA from each sample were used to make library according to the product guide of stranded mRNA library kit (E4720L; NEBNext Ultra™ Directional RNA Library Prep Kit for Illumina). In short ...
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bioRxiv - Genomics 2023Quote: ... 200ng alkylated RNA were used as input for generating 3’-end mRNA sequencing libraries using a commercially available kit (QuantSeq 3ʹ mRNA-Seq Library Prep Kit FWD for Illumina, Lexogen).
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bioRxiv - Cancer Biology 2021Quote: ... Libraries were pooled and sequenced with 75bp single-end sequencing to a depth of 20 × 106 reads per sample on a NextSeq500 (Illumina). Raw sequencing reads were demultiplexed using bcl2fastq (v2.17.1.14 ...
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bioRxiv - Microbiology 2021Quote: ... All samples were pooled at an equimolar concentration for paired end 2 × 300 bp sequencing via the MiSeq system (Illumina) using the MiSeq Reagent Kit v3 (600 cycles) ...
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bioRxiv - Genetics 2021Quote: ... The scRNAseq samples were then sequenced on 1/7th of a single S4 lane on a NovaSeq 6000 platform (Illumina). For the ScISOr-Seq library ...
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bioRxiv - Evolutionary Biology 2020Quote: ... RNA-seq was carried out as described in the Illumina TruSeq Stranded mRNA Sample Preparation Guide for the Illumina HiSeq 1000 System (Illumina) and the KAPA Library Quantification Kit (Kapa Biosystems) ...
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bioRxiv - Evolutionary Biology 2021Quote: Sequencing of samples was conducted by the University of Chicago Genomics core using an Illumina HiSeq2500 (Illumina, San Diego, CA) with paired-end 100 base pair reads ...
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bioRxiv - Evolutionary Biology 2021Quote: ... Samples were sequenced on an Illumina HiSeq 4000 producing 2×150 bp paired-end reads (Illumina, San Diego, CA, USA) at Novogene (Sacramento ...
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bioRxiv - Cell Biology 2022Quote: ... The generated data were subsequently demultiplexed using sample-specific barcodes and changed into fastq files using bcl2fastq (Illumina; version 1.8.4). Reads were afterwards aligned to the human reference genome (GRCh38/hg38 ...
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bioRxiv - Molecular Biology 2021Quote: ... Tagmentation of 600pg of cDNA is performed according to Nextera DNA sample preparation manufacturer instructions (Illumina, Inc., FC-131-1096) using a Truseq-P5 hybrid constant oligo (IDT ...
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bioRxiv - Synthetic Biology 2019Quote: ... and a 10%-20% PhiX was spiked in as a control (PhiX is a genomic DNA sample provided by Illumina).
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bioRxiv - Genomics 2019Quote: ... Each library was sequenced using single-end 75 bp reads (120-140 x 106 reads per sample) in a NextSeq500 System (Illumina).
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bioRxiv - Immunology 2020Quote: ... Libraries were constructed from the barcoded cDNAs (Translational Science Laboratory at the Medical University of South Carolina) and sequenced for approximately 300 million reads/sample on a NovaSeq S4 flow cell (Illumina) at the VANTAGE facility (Vanderbilt University Medical Center).
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bioRxiv - Microbiology 2019Quote: ... The pooled samples were then sequenced using paired-end v2 chemistry using Illumina Miseq sequencing technology (Illumina, San Diego, CA) at the Microbiome Core ...
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bioRxiv - Genomics 2019Quote: ... Each sample library was uniquely barcoded and quantified by PCR using a PhiX Control v3 (Illumina, Cat #FC-110-3001) standard curve ...
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bioRxiv - Microbiology 2019Quote: Ocular bacterial community composition was determined previously by 454 pyrosequencing.10 Additional samples were analysed by 16S rRNA sequencing using the MiSeq Next Generation Sequencing Platform (Illumina). Amplicon PCR was performed using the Phusion High-Fidelity PCR Master Mix (New England Biolabs ...
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bioRxiv - Cancer Biology 2020Quote: ... and library enrichment were performed as described in the High Throughput protocol of the TruSeq RNA Sample Prep Guide (Illumina). RNA libraries were assessed for quality and quantity with the Agilent 2100 BioAnalyzer and the Quant-iT PicoGreen dsDNA Assay Kit (Life Technologies) ...
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bioRxiv - Genetics 2021Quote: ... the log R (LRR) intensity measurements and B allele frequency (BAF) for each sample at each probe were exported from Illumina’s Genome Studio software ...
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bioRxiv - Genetics 2020Quote: Genotyping was attempted on 6525 DNA samples using the Multi-Ethnic Genotyping Array (MEGA)V2 (EX) consortium chip on the Infinium iSelect platform by Illumina FastTrack Services (Illumina ...
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bioRxiv - Evolutionary Biology 2021Quote: ... Samples were 96-plexed in each of three lanes of Illumina HiSeq 2000 (Illumina Inc. San Diego, CA, United States), and one well in each plate was left as a negative control ...
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bioRxiv - Genomics 2021Quote: ... Following immunoprecipitation with Dynabeads Protein G beads (invitrogen) in PCR tubes, samples were subject to Tagmentation (5 µl Tagmentation Buffer, 1 µl Tagmentation DNA Enzyme (Illumina), 19 µl Nuclease free water ...
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bioRxiv - Neuroscience 2020Quote: Tagmentation was performed per pool by adding 3 μL double-stranded cDNA sample to 5.5 μL Nextera TD buffer (Illumina, 15027866), 2.5 μL NF H2O and 1.0 μL TDE1 Enzyme (Illumina ...
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bioRxiv - Neuroscience 2020Quote: The raw base calls were demultiplexed and converted to sample specific fastq files using cellranger mkfastq1 that uses bcl2fastq program provided by Illumina. The default setting for bcl2fastq program was used ...
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bioRxiv - Cancer Biology 2021Quote: ... by total RNA extraction from confluent cells with Ribo-Zero rRNA depletion and DNAse treatment before cDNA was prepared with the TruSeq RNA and DNA Sample PrepKit (Illumina). 50bp paired-end cDNA libraries sequenced on an Illumina HiSeq 2000 (Genomics Core Facility ...
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bioRxiv - Neuroscience 2020Quote: ... Bulk DNA samples and single neuronal nuclei amplified by multiple displacement amplification (MDA) were prepared and whole-genome sequenced by Illumina HiSeq platforms as part of previous studies in our lab (16) ...
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bioRxiv - Cancer Biology 2021Quote: ... Tumor samples were sub-classified into four subgroups using genome-wide DNA methylome analysis (Illumina Methylation EPIC 850K bead arrays) as previously described.17 Normal cerebellum specimens were obtained at autopsy ...
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bioRxiv - Neuroscience 2019Quote: ... these had been selected using BARCOSEL26 to allow pooling and sequencing of all samples in one pool run on three separate runs on a MiSeq (Illumina; v3 600 cycle kit ...
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bioRxiv - Genomics 2020Quote: ... We genotyped 5645 samples on the Illumina HumanCoreExome-12v1.0_B (HumanCore) and 192 samples on the Illumina HumanOmni1-Quad V1.0_B (Omni) bead chip arrays (Illumina, San Diego, CA, USA) at The Centre for Applied Genomics (Hospital for Sick Children ...
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bioRxiv - Microbiology 2020Quote: ... Samples were submitted to Duke Center for Genomic and Computational Biology core sequencing facility for adapter ligation with TruSeq (Illumina) adapters and library amplification ...
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bioRxiv - Plant Biology 2021Quote: ... was performed with two (for HB40-IOE seedlings) and three (for WT and HB40OX seedlings) biological replicates per sample on HiSeq4000 (Illumina). The sequencing adaptors and low-quality bases were trimmed using Trimmomatic v0.38 (Bolger et al ...
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bioRxiv - Microbiology 2019Quote: ... The sample was sent for Illumina sequencing at the University of California Davis Genomic Center on a NEXT Seq (Illumina) with single-end reads using primers (P150 and P151 ...
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bioRxiv - Cancer Biology 2020Quote: ... The generated data were subsequently demultiplexed using sample-specific barcodes and changed into fastq files using bcl2fastq (Illumina; version 1.8.4). Reads were afterwards aligned to the human reference genome (GRCh38/hg38 ...
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bioRxiv - Cancer Biology 2020Quote: ... These samples were subsequently sequenced in a paired end 151 bp run on a Novaseq instrument (Illumina, San Diego, CA) resulting in an average coverage of 120x.