Labshake search
Citations for Illumina :
3701 - 3750 of 10000+ citations for DNA Purification kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2022Quote: Genomic DNA extraction and the sequencing library preparation for short-read 2×250 bp paired-end MiSeq (Illumina) sequencing was performed as described before (Valcek et al. ...
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bioRxiv - Genomics 2022Quote: ... the samples were applied following the Illumina Infinium Human Methylation DNA chip manufacturer protocols (Illumina, San Diego, CA). Chips were analyzed using the Illumina Hi-Scan system at the McDonnell Genome Institute (MGI ...
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bioRxiv - Microbiology 2020Quote: ... The libraries were pooled together and run on an Illumina MiSeq DNA sequencer (Illumina Inc., San Diego, CA). The genome of each strain was sequenced to a targeted depth of 50X coverage.
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bioRxiv - Microbiology 2019Quote: ... 1 μl of DNA (approximately 0.5-2.0 ng/μl) was used in the tagmentation reaction using Nextera chemistry (Illumina) to yield fragments larger than 150 bp ...
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bioRxiv - Cancer Biology 2019Quote: ... Multiplexed libraries (12 samples per pool) were sequenced across 2 lanes of the HiSeq 2500 DNA Analyzer (Illumina) to generate a total of approximately 20 million 75 bp single reads for each sample ...
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bioRxiv - Microbiology 2019Quote: ... DNA was sequenced on a ∼40 Gb (i.e. 130 M reads) mid-output NextSeq 500 System (Illumina Inc.) 300 cycle (2 × 150 bp ...
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bioRxiv - Genomics 2019Quote: WGS libraries were prepared using optimized Illumina protocols depending on DNA type (Illumina, San Diego, California, United States). The Early Access FFPE-extracted gDNA Library preparation kit (Illumina ...
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bioRxiv - Genetics 2021Quote: ... Bisulfited DNA was randomly assigned to Illumina Infinium Methylation EPIC BeadChip Array (Illumina, Inc., San Diego CA, USA) and methylomic profiling was read out by Illumina iScan System as per the manufacturers’ standard protocol (Illumina) ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Sequencing of DNAs pulled from the hybridization experiment was performed with Illumina MiSeq (Illumina, San-Diego, California. USA) to produce 2 x 150 bp paired-end reads ...
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bioRxiv - Genomics 2020Quote: ... Genome-wide genotyping of 200 ng genomic DNA from the remaining 207 patients was carried out using Infinium HumanOmni2.5-8 v1.2 BeadChip microarrays (Illumina). After completion of the assay ...
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bioRxiv - Evolutionary Biology 2020Quote: ... connecting the joints and enriching of DNA were done by NexteraXT library prepkit (Illumina, San Diego, CA, USA), then the DNA library was obtained ...
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bioRxiv - Microbiology 2021Quote: ... The library was diluted to a final concentration of 7 pM and 5% of PhiX DNA (Illumina, USA) was added ...
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bioRxiv - Genetics 2020Quote: ... using a bead-to-DNA ratio of 1:1 before high-throughput sequencing on the MiniSeq system (Illumina). Libraries were sequenced 1 × 75bp for a minimum coverage of 2 million read depth ...
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bioRxiv - Genetics 2020Quote: ... Indexed DNAs smaller than 500 bp were gel purified and subjected to next generation sequencing (HiSeq 4000, Illumina). Quality and quantity of fragmented DNA and the library for sequencing were analyzed by Bioanalyzer (Agilent High Sensitivity DNA kit) ...
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bioRxiv - Evolutionary Biology 2021Quote: ... Purified DNA was fragmented and used to construct short-insert (500 bp) libraries per the manufacturer’s instructions (Illumina). Libraries were quantified using an Agilent 2100 Bioanalyzer (Agilent Technologies ...
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bioRxiv - Cancer Biology 2022Quote: ... The DNA methylation status of more than 450,000 CpG sites was interrogated using the Infinium HumanMethylation450 microarray (Illumina). Preprocessing and normalization involved steps of probe filtering ...
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bioRxiv - Genetics 2022Quote: ... DNA extracted from these samples was genotyped using the Illumina Global Diversity Array (GDA; Illumina, San Diego, CA). A quality threshold of 99.2% SNP pass rate per sample resulted in 2,446 individuals and 1,721,246 SNPs passing initial genotyping QC ...
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bioRxiv - Genomics 2022Quote: ... DNA extracted from these samples was genotyped using the Illumina Global Diversity Array (GDA; Illumina, San Diego, CA). Variant calling and quality control (QC ...
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bioRxiv - Genomics 2022Quote: ... We used IDT for Illumina DNA/RNA Unique Dual Indexes (Catalog number 20027213, Illumina, San Diego, Unites States), and shotgun-sequenced the pooled samples at the Roy ...
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bioRxiv - Genomics 2022Quote: Genome-wide DNA methylation was performed using the Illumina Infinium Mouse Methylation BeadChip (Illumina, San Diego, CA, USA) following the standard manufacturer’s protocol ...
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bioRxiv - Microbiology 2022Quote: ... DNA was sequenced at the Wellcome Sanger Institute on the Illumina HiSeq X10 instrument (Illumina Inc., United States) to produce 150 bp paired end reads ...
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bioRxiv - Plant Biology 2024Quote: ... DNA pools were sequenced with paired-end reads on Illumina HiSeq2000 platform (Illumina, Inc., San Diego, CA, USA) and the obtained sequences have been deposited at the Sequence Read Archive database at the National Center for Biotechnology Information under BioProject accession number PRJNA860761 ...
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bioRxiv - Cancer Biology 2024Quote: ... Nuclei were then resuspended in 50 μL transposition reaction mix containing 25 μL 2X Tagment DNA buffer (Illumina), 2.5 μL Tn5 transposase (Illumina) ...
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bioRxiv - Microbiology 2023Quote: Genomic DNA was extracted and sequenced via Illumina MiSeq or NextSeq benchtop sequencer (Illumina, Inc., San Diego, CA) as previously described34 ...
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bioRxiv - Cell Biology 2024Quote: ... ChIP’d DNA and IgG controls for peak calling were prepared and sequenced using the NovaSeq 6000 platform (Illumina) as 150bp paired-end reads by Novogene Bioinformatics Technology Co. ...
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bioRxiv - Cell Biology 2024Quote: ... 1.2 µg of DNA were bisulfite converted and analyzed using the EPIC BeadChip microarray (Illumina, San Diego, USA) by Life & Brain company (Bonn ...
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bioRxiv - Developmental Biology 2023Quote: ... Isolated nuclei were mixed with 50 µl of transposition reaction mix containing Tagment DNA Enzyme 1 (Illumina, 20034197). Samples were incubated using a thermo shaker at 37°C ...
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bioRxiv - Microbiology 2023Quote: ... The DNA library was paired-end sequenced (2 x 151 bp) on a NovaSeq S4 system (Illumina, USA). A long-read sequencing library was prepared according to the SQK-LSK110 protocol (ONT ...
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FTSH3 facilitates complex I degradation through a direct interaction with the complex I subunit PSSTbioRxiv - Plant Biology 2023Quote: ... from total genomic DNA and sequenced with a 70-bp read length on a NextSeq 500 system (Illumina). Whole genome sequencing was done using the HiSeq 2500 (Illumina) ...
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bioRxiv - Synthetic Biology 2023Quote: The sequencing libraries were mixed with 20–30% of PhiX spike-in DNA control (Illumina #FC-110-3001) for better cluster generation on the flow cell and sequenced by Illumina MiSeq (MiSeq v3 150-cycles kit #MS-102-3001 or 300-cycles kit #MS-102-3003) ...
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bioRxiv - Microbiology 2022Quote: ... Genomic DNA was extracted from infant mice faecal samples and sent to Eurofins (Germany) for sequencing by Illumina MiSeq platform (Illumina ...
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bioRxiv - Genomics 2023Quote: ... The MDA reactions were prepared using RepliPHI Phi29 DNA polymerase and Reagent set (Epicentre, Illumina, Madison, WI, USA) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2022Quote: ... DNA samples eluted and purified from the two technical replicates were pooled before library preparation (Illumina TruSeq ChIP) and sequencing (Illumina NextSeq 500 ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation (FS DNA Library, NEBNext® Ultra™, Ipswitch, MA, US) and sequencing (Illumina HiSeq2500 by Illumina, San Diego ...
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bioRxiv - Plant Biology 2023Quote: Illumina sequencing (350bp insert DNA library, 150-bp paired-end reads, 40x coverage, via Illumina NovaSeq PE150 Platform) was performed for the bulked pools and parents ...
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bioRxiv - Neuroscience 2023Quote: ... and pellets gently resuspended in 50 μL of transposition reaction mix (25 μL tagment DNA buffer (Nextera, Illumina), 2.5 μL tagment DNA enzyme (Nextera ...
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bioRxiv - Cancer Biology 2022Quote: CLS performed next-generation sequencing on genomic DNA from FFPE tumor samples using the NextSeq platform (Illumina, Inc.). Here ...
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bioRxiv - Genomics 2022Quote: ... To the 1.5 μl concentrated air DNA extraction we added 2.5 μl Illumina Nextera reaction buffer (FC-121-1030, Illumina), 1 μl 1 pg/μl Lambda DNA (SD0011 ...
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bioRxiv - Cancer Biology 2023Quote: ... on extracted DNA with size selection for 200-300 bp fragments and sequenced on a NextSeq 550 (Illumina) run in single-end mode for 75 cycles.
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bioRxiv - Immunology 2023Quote: ... 150pg of cDNA was then converted to sequencing library using the Nextera XT DNA (Illumina, San Diego, US). This uses a transposon able to fragment and tag the double-stranded cDNA (Tagmentation) ...
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bioRxiv - Genomics 2023Quote: ChIP-DNA was purified and subjected to deep sequencing using the Solexa Genome Analyzer (Illumina, San Diego, CA). The protocol followed to analyze the ChIP-seq data can be found in Supplementary methods section.
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bioRxiv - Cell Biology 2024Quote: ... The amplified DNA was then pooled to a 10 nM final concentration followed by a 5% PhiX (Illumina) spike and sequenced in a PE100 run on a HiSeq 4000 sequencer (Illumina ...
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bioRxiv - Molecular Biology 2021Quote: ... and ribosomal RNA was removed using the Ribo-Zero™ Magnetic Core Kit and Ribo-Zero™ rRNA Removal kit (Illumina, USA), according to the manufacturers’ protocols ...
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bioRxiv - Pathology 2022Quote: ... The RNA of the extracted sample was used to build a cDNA library by a reverse transcription kit based on the manufacturer’s instruction (NEBNext® Ultra™ RNA Library prep Kit for Illumina®).
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bioRxiv - Microbiology 2021Quote: ... The QIAseq FastSelect 5S/16S/23S rRNA removal kit was used to treat samples prior to library prep with the TruSeq Stranded Total RNA Library Prep Kit (Illumina, CA, USA). Sequencing was conducted on the Illumina HiSeq 4000 at 50 bp single-end reads.
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bioRxiv - Bioengineering 2022Quote: Total RNA was extracted from iPSC-CM monolayers using a Qiagen RNeasy Micro kit and prepared for sequencing at 100 ng with a Stranded Total RNA Prep kit (Illumina Inc., USA), and bulk-sequenced at the Princess Margaret Genomics Center (Toronto ...
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bioRxiv - Neuroscience 2023Quote: ... RNA-seq libraries were prepared from 600ng of total RNA using the TruSeq® Stranded mRNA Library Prep kit and the TruSeq® RNA Single Indexes kits A and B from Illumina. The library quality and quantity were checked using an Agilent 2100 Bioanalyzer and a Qubit dsDNA HS Assay Kit ...
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bioRxiv - Microbiology 2024Quote: ... The RNA was treated with the QIAseq FastSelect 5S/16S/23S rRNA removal kit prior to library prep with the TruSeq Stranded Total RNA Library Prep Kit (Illumina, CA, USA). The Illumina HISeq 4000 was used for sequencing at 50bp single-end reads.
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bioRxiv - Evolutionary Biology 2024Quote: ... which were the Infinium Global Screening Array-24 Kit™ (GSA24) and the Infinium Global Diversity Array-8 Kit™ (GDA8) from Illumina and the Axiom™ Genome-Wide Human Origins (HO ...
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bioRxiv - Cancer Biology 2023Quote: ... Sequencing was performed using a NextSeq 500/550 High Output Kit v2.5 (75 Cycles) kit (cat# 20024906) on an Illumina Sequencing NextSeq 550 System ([RRID: SCR_016381], Illumina, San Diego, CA, USA). The initial annotated dataset went through quality control (QC ...