Labshake search
Citations for Illumina :
3451 - 3500 of 10000+ citations for HDM Fluorescent Kit 2 Plate since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Pharmacology and Toxicology 2022Quote: ... one RNA pool of 5 livers from each treatment and sex were independently subjected to sequencing (Illumina Novaseq 6000 paired-end (2×150)) ...
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bioRxiv - Genomics 2019Quote: ... and 800 bp) and four mate-pair libraries (2, 6, 10, and 20 Kb) following the standard protocols provided by Illumina (San Diego, USA). Subsequently ...
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bioRxiv - Genetics 2022Quote: ... Illumina compatible P5 P7 sequences were added during post capture amplification and libraries were submitted for 2 × 150bp paired-end next generation sequencing (Illumina, San Diego, CA), targeting 15 million clusters per sample ...
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bioRxiv - Molecular Biology 2019Quote: ... Biomark Access Array system followed by sequencing with 2×225 base pair reads on a MiSeq instrument using version 3 chemistry (Illumina, San Diego, CA). FASTQ files were processed through a custom bioinformatics pipeline (ScanIndel ...
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bioRxiv - Synthetic Biology 2019Quote: ... Kmers shortlisted for testing were selected based on the following cutoffs: abundance in the genome (coverage in combined male and female Illumina data >log10(2), coverage in PacBio data >log10(1) ...
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bioRxiv - Microbiology 2021Quote: Metagenomic libraries (2×150 paired-end) were prepared and sequenced on an Illumina NextSeq 500 sequencing platform (Illumina Inc., San Diego, CA, USA). Quality of the reads and presence of adaptor sequences were checked using FastQC v.0.11.5 (Andrews ...
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bioRxiv - Genomics 2021Quote: ... ~100X sequencing coverage with Illumina short reads was generated on Illumina MiSeq (2 × 300 bp mode) instrument in a high output mode (Illumina, San Diego, CA) to support PacBio read correction and assembly polishing as needed.
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bioRxiv - Evolutionary Biology 2020Quote: ... Barcoded DNA paired end libraries with insert size of approximately 150bp were prepared using Illumina Truseq HT library prep and sequenced on 2 lanes using Illumina NovaSeq (Illumina Inc., California, USA). Raw paired-end reads were checked for quality using FastQC ...
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bioRxiv - Genetics 2020Quote: ... and the nuclei was resuspended with Tn5 transposase reaction mix (25◻μl 2◻×◻TD buffer, 2.5◻μl Tn5 transposase and 22.5◻μl nuclease-free water) (Illumina) at 37◻°C for 30 min ...
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bioRxiv - Genomics 2022Quote: Libraries were sent to Novogene (Sacramento, CA) for sequencing on a single 2×150 lane of a HiSeq X Ten (Illumina, San Diego CA) and the raw sequencing reads were uploaded to the NCBI Sequence Short Read Archive (SRA ...
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bioRxiv - Genomics 2022Quote: ... spun at 300G for 12 min at 4 ºC and resuspended in 20 uL transposition mix: 1X TD buffer and 2 uL of TDE1 (Illumina #FC-121-1030), 0.01% Digitonin in DMSO ...
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bioRxiv - Genomics 2022Quote: ... and DRB3, 4, 5 (exon 2) genes with Fluidigm Access Array (Fluidigm, Singapore) and sequenced on an Illumina MiSeq sequencer (Illumina, San Diego, USA). HLA alleles and genotypes are called using the Omixon HLA Explore (version 2.0.0 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Samples were 2 × 150 bp paired-end sequenced on one lane each of a HiSeq X Ten instrument (Illumina, Inc., San Diego, CA). Samples for Luke and Nababiep were prepared by HudsonAlpha Institute for Biotechnology (Huntsville ...
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bioRxiv - Evolutionary Biology 2023Quote: ... according to the manufacturer’s instructions and stored in 10 mM Tris buffer at pH 8 and -80 ⁰C until paired-end reads of 2 x 150 bp were sequenced on a NextSeq 500/550 (Illumina, San Diego, CA) at the University of Bristol Genomics Facility ...
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bioRxiv - Physiology 2022Quote: ... The hypervariable regions V3-V4 of the 16S rRNA coding gene were amplified using Illumina primers (fw: CCTACGGGNGGCWGCAG, rev: GACTACHVGGGTATCTAATCC) and sequencing (2 × 300 bp paired-end) was carried out on the MiSeq platform (Illumina, San Diego, California) with a coverage of 50k reads ...
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bioRxiv - Genomics 2023Quote: ... multiplexed at even concentration and sequenced on 600 bp (2 × 300bp) pair-end using Illumina MiSeq platform (Illumina, Inc., USA) (EMP 16S Illumina Amplicon Protocol, n.d.).
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bioRxiv - Microbiology 2023Quote: Extracted DNA for all samples was sent to The Center for Applied Genomics (Toronto, Canada) for shotgun metagenome sequencing using an Illumina HiSeq platform with paired 2 × 150 bp reads (Illumina, San Diego, CA). Metagenomic reads were quality trimmed using bbduk in the BBTools suite (https://sourceforge.net/projects/bbmap/ ...
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bioRxiv - Developmental Biology 2023Quote: ... pooled and sequenced on a single lane of an Illumina HiSeq 4000 instrument using a 2×100 paired-end sequencing protocol (Illumina, San Diego, CA) to validate quality and to adjust library pooling according to actual cell capture rates ...
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bioRxiv - Microbiology 2023Quote: ... 2 μl of the plasmid was used as a template and amplified using the Nextera DNA Indexes (Illumina Inc., San Diego, CA, USA) index primers ...
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bioRxiv - Microbiology 2023Quote: ... 16S rRNA gene amplicon libraries targeting the V1-V3 or V4 region were constructed using a dual-indexing method and sequenced on a MiSeq with a 2×300 bp run format (Illumina, San Diego, CA). Reagent-only negative controls were carried through the DNA extraction and sequencing process.
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bioRxiv - Genomics 2023Quote: ... Libraries were quantified and sequenced (paired-end, 2 x 111 cycles) using the Illumina NovaSeq 6000 device (Illumina Inc., San Diego, CA, USA) at IPK Gatersleben54 ...
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bioRxiv - Genomics 2024Quote: ... 11 μL Nuclease-free water and 2 μL RP1 and RPIx primers each (10 mM, for details see Illumina smallRNA indexing primer sequences) to the 10 μL single-stranded DNA product ...
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bioRxiv - Microbiology 2024Quote: ... Metagenome sequencing was performed in two lanes of a NovaSeq S4 flow cell in 2×150bp paired-end format on a NovaSeq 6000 (Illumina, San Diego, USA). Raw sequencing data is available on the NCBI SRA (BioProject PRJNA974462).
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bioRxiv - Plant Biology 2020Quote: ... the rRNA was depleted using the Ribo-Zero plant leaf kit (Illumina, MRZPL1224) according to the ARTseq/TruSeq Ribo Profile Kit manual ...
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bioRxiv - Plant Biology 2020Quote: ... Strand-specific libraries were prepared using the TruSeq Stranded Total RNA kit (Illumina). PolyA+ RNAs were selected according to manufacturer’s instructions and the cDNA libraries were sequenced on a HiSeq 2500 Illumina sequencer ...
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bioRxiv - Cancer Biology 2021Quote: ... RNA-seq libraries were created with TruSeq Stranded mRNA Library Prep Kit (Illumina). The sequencing performed was HiSeq 4000 Single-read 50 bp ...
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bioRxiv - Cancer Biology 2021Quote: ... Illumina sequencing libraries were prepared using the Truseq RNA stranded polyA kit (Illumina) and sequenced with 2×50p paired-end sequencing on an Illumina NextSeq2000 system ...
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bioRxiv - Neuroscience 2021Quote: ... Libraries were prepared using the TruSeq total RNA sample preparation kit from Illumina, following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2021Quote: ... For the library preparation the TruSeq Stranded mRNA Library Prep kit from Illumina was used ...
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bioRxiv - Cancer Biology 2021Quote: ... Libraries were prepared using the TruSeq Stranded Total RNA Library Prep Kit (Illumina), analyzed for insert size distribution using the 4200 TapeStation D1000 ScreenTape Assay (Agilent) ...
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bioRxiv - Developmental Biology 2020Quote: ... RNA-seq libraries were constructed using Nextera XT DNA Library Preparation Kit (Illumina) and multiplexed using Nextera XT Indexes kit (Illumina) ...
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bioRxiv - Developmental Biology 2021Quote: ... RNA-Seq libraries (NEBNext Ultra II Directional RNA Library Prep Kit for Illumina, New England BioLabs ...
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bioRxiv - Cell Biology 2020Quote: ... and ribosomal RNA was removed using the RiboZero Gold rRNA Removal Kit (Illumina) per the manufacturers protocol.
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bioRxiv - Cell Biology 2020Quote: Sequencing libraries were prepared using the TruSeq Stranded mRNA Sample Preparation kit (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2020Quote: ... using the NextSeq 500/550 High Output Kit v2.5 (150 Cycles) (Illumina, 20024907) to a depth of at least 10 million reads per sample ...
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bioRxiv - Genetics 2021Quote: ... following the recommended kit protocol and sequenced on a NovaSeq 6000 – SR100 (Illumina).
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bioRxiv - Molecular Biology 2020Quote: ... and rRNA was removed by the Ribo-Zero Gold rRNA Removal Kit (Illumina). The stranded RNA-seq libraries were constructed with the Script-seq V2 RNA-seq library preparation kit (Illumina) ...
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bioRxiv - Immunology 2021Quote: ... ChIP-seq libraries were prepared with the TruSeq ChIP Sample Preparation Kit (Illumina) and 2×75 bp paired-end reads were sequenced on an Illumina HiSeq 2000 machine ...
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bioRxiv - Microbiology 2020Quote: ... Ribosomal RNA was depleted with a Bacterial Ribo-Zero rRNA Removal Kit (Illumina) according to manufacturer instructions ...
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bioRxiv - Microbiology 2019Quote: ... The purified DNA was fragmented with the Nextera XT kit (Illumina, Madison, WI), tagged with Illumina-compatible primers ...
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bioRxiv - Molecular Biology 2021Quote: RPF were depleted of ribosomal RNA with the Ribo-zero Human kit (Illumina) according to the manufacturer’s recommendations ...
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bioRxiv - Molecular Biology 2021Quote: ... RNA-seq libraries were prepared using a TruSeq Stranded RNA LT Kit (Illumina). The libraries were sequenced for single-end 65 bps reads on an Illumina HiSeq 2500.
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bioRxiv - Developmental Biology 2021Quote: ... Sequencing libraries were constructed with a TruSeq stranded mRNA sample preparation Kit (Illumina), and high-throughput sequencing was carried out to generate paired-end 150 bp reads using the NovaSeq 6000 Reagent Kit (illumina) ...
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bioRxiv - Developmental Biology 2021Quote: ... The cDNA library was constructed using the Illumina TruseqTM RNA kit(Illumina, USA). The sequencing read length is PE125 ...
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bioRxiv - Genomics 2021Quote: ... Libraries were then constructed with the TruSeq ® ChIP Library Preparation Kit (Illumina) following the manufacturer’s instructions and sequenced on an Illumina paired-end platform with 150 bp per read length by Annoroad Gene Technology Co. ...
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bioRxiv - Evolutionary Biology 2021Quote: ... The cDNA synthesis for the libraries was performed with Scriptseq v2 kit (Illumina) (according to the manufacturer’s instructions) ...
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bioRxiv - Evolutionary Biology 2020Quote: ... using the Nextera XT v2 Index Kit (Illumina Inc., San Diego, CA, USA). PCRs were run in 50 μl reactions and contained 25 μl 2X Phusion High-Fidelity PCR Master Mix (ThermoFisher Scientific ...
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bioRxiv - Evolutionary Biology 2020Quote: ... and directional libraries were prepared using the Small RNA Sample Prep Kit (Illumina). Both libraries were sequenced on an Illumina NextSeq500 ...
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bioRxiv - Evolutionary Biology 2020Quote: ... we used a TruSeq Stranded mRNA High Throughput Kit (Illumina, San Diego, California), following manufacturer protocols ...
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bioRxiv - Evolutionary Biology 2021Quote: ... 11.25 µl ddH2O and 1.25 µl Tn5 Transposase (Illumina Kit # FC-121-1030). The reaction was carried out in a thermal cycler for 30 minutes at 37°C with an additional mixing step 15 minutes into the reaction ...