Labshake search
Citations for Illumina :
251 - 300 of 3798 citations for Probable U3 small nucleolar RNA associated protein 11 UTP11 Antibody FITC since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2024Quote: ... Library preparation and small RNA sequencing of the PVH and ARC samples was performed as described previously (40) using a TruSeq® Small RNA Library Preparation kit (Illumina, Cambridge, UK). Libraries were sequenced using a HiSeq 4,000 platform ...
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bioRxiv - Genomics 2022Quote: ... WG and Small RNA libraries were prepared using the Nextera DNA Library Preparation Kit for paired end reads (Illumina, San Diego CA, USA) and the NEBNext Small RNA Library Prep Set (New England Biolabs ...
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bioRxiv - Cell Biology 2024Quote: ... library was generated for 10 plasma exosome samples (n=5, young and old individuals each) using a propriety Illumina Truseq™ Small RNA Preparation kit (Illumina, # RS-930), according to the manufacturers’ guide ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Per sample read yields from a small scale iSeq (Illumina) paired-end 2 × 146bp sequencing run on an equivolume pool of the individual libraries were used to normalize volumes of the individual mNGS libraries to generate an equimolar pool ...
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bioRxiv - Molecular Biology 2022Quote: ... Small DNA libraries were sequenced using the HiSeq2500 platform (Illumina) in the rapid run mode (50-nucleotide single-end reads).
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bioRxiv - Molecular Biology 2022Quote: ... Small DNA libraries were sequenced using the HiSeq2500 platform (Illumina) in the rapid run mode (50-nucleotide single-end reads) ...
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bioRxiv - Cancer Biology 2021Quote: ... MiRNA NGS libraries were then prepared using TruSeq Small RNA Library protocol and sequences using HiSeq 2500 High Throughput Sequencer (all from Illumina, San Diego, California, USA).
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bioRxiv - Evolutionary Biology 2020Quote: ... library preparation was performed using the Illumina TruSeq small RNA kit and cDNA was sequenced on an Illumina NextSeq platform (50bp; Illumina, San Diego, CA, USA). Adapter sequences were trimmed with cutadapt (v2.3 ...
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bioRxiv - Genetics 2022Quote: ... Indexed libraries prepared from small RNA were normalized and all 24 libraries were pooled and split between two lanes of a MiSeq (Illumina, Inc., San Diego, CA) for 50 base-pair single read sequencing.
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bioRxiv - Genetics 2022Quote: ... Retinal cDNA libraries were created by the Iowa Institute of Human Genetics Genomics Division using the TruSeq Stranded mRNA Library Prep Kit and the TruSeq Small RNA Library Prep Kit (Illumina, Inc., San Diego, CA). Indexed libraries prepared from mRNA were normalized and pooled into three groups (corresponding to three biological replicates ...
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bioRxiv - Cancer Biology 2022Quote: ... for 11 cycles and sequenced on a NextSeq 500 (Illumina). All samples were processed at the Center for Epigenetics Research (CER ...
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bioRxiv - Genomics 2020Quote: ... we used VCF-formatted NA12878 truth-set small variants from Illumina Platinum Genomes to run TranscriptClean in variant-aware mode (--canonOnly + defaults) ...
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bioRxiv - Cancer Biology 2024Quote: ... Genetic testing was performed using a targeted panel of disease-associated genomic alterations (Agilent Haloplex assay, Illumina HiSeq2500) and fusion transcripts (Illumina HiSeq2500) ...
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bioRxiv - Evolutionary Biology 2023Quote: ... (2016) sequenced mouse whole genomes to 11-26x coverage (Illumina HiSeq 2000) from natural populations of house mouse (Mus musculus) ...
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bioRxiv - Genetics 2021Quote: ... Following DNA amplification and fragmentation according to the associated Illumina HTS assay protocol samples were hybridized to an Infinium PsychArray v1.1 BeadChip (Illumina). The stained bead chip was imaged using the iScan System (Illuminia ...
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bioRxiv - Immunology 2024Quote: ... tagmentation was done using ILMN Tag DNA Enzyme & Buffer Small Kit (Illumina # 20034197) decreasing tagmentation reaction volume (to 2.5μl ...
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bioRxiv - Genomics 2020Quote: ... We also provided it with VCF-formatted NA12878 truth-set small variants from Illumina Platinum Genomes ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and small-scale sequencing (2x146bp) on an iSeq platform (Illumina, San Diego, CA, US). Equimolar pooling of individual libraries from each plate was performed before running large-scale paired-end sequencing (2x146bp ...
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bioRxiv - Microbiology 2024Quote: ... The libraries were then diluted to 11 pM and 1% denatured PhiX (Illumina Inc.) was added as described by the supplier ...
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bioRxiv - Evolutionary Biology 2021Quote: ... and small-scale sequencing (2 x146bp) on an iSeq platform (Illumina, San Diego, CA, US). Subsequent equimolar pooling of individual libraries from each plate was performed prior to performing large-scale paired-end sequencing (2 × 146 bp ...
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bioRxiv - Microbiology 2023Quote: The USEARCH pipeline (v.11) [44] was used to process the data obtained from Illumina sequencing ...
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bioRxiv - Plant Biology 2024Quote: ... IGV visualization of alignments also revealed a few small regions that were not covered by Illumina reads ...
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bioRxiv - Genetics 2023Quote: ... 10/11-plex pre- pooled target capture was performed and sequenced in 43 lanes by Illumina HiSeq 2000 ...
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bioRxiv - Genetics 2021Quote: A custom genotyping microarray for selected feline disease and trait associated variants (S2 Table) was developed based on the robust and widely utilized Illumina Infinium XT platform (Illumina, Inc., San Diego, CA, USA), commercially available as the Complete for Cats™ / MyCatDNA™ / Optimal Selection™ Feline tests ...
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bioRxiv - Evolutionary Biology 2021Quote: ... and 2017 (n = 11) were prepared into two Illumina TruSeq LT libraries (Illumina, Inc. San Diego, CA), and sequenced on two Illumina NextSeq500 runs.
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bioRxiv - Genomics 2021Quote: ... 11 kb and 13 kb) were prepared following Nextera protocol (Nextera Mate Pair sample preparation kit, Illumina). Each library was sequenced using 100 base-length read chemistry on a paired-end flow cell on the Illumina HiSeq2000 (Illumina ...
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bioRxiv - Developmental Biology 2021Quote: ... obtained from TBXT shRNA sOPTiKD hESC in the presence and absence of Tetracycline (three biological replicates) were harvested and samples were prepared using the Illumina Tagment DNA Enzyme and Buffer Small Kit (Illumina), 1% Digitonin (Promega ...
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bioRxiv - Plant Biology 2021Quote: ... including larger than expected correlations between samples with certain barcode combinations (Supplementary Note 1) and a small but significant number of reads mapping to impossible barcode combinations (combinations of CEL-seq and Illumina barcodes that were not used in the experiment) ...
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bioRxiv - Cancer Biology 2022Quote: Cells were incubated with Nextera Tn5 Transposase and 2x TD reaction buffer of the Illumina Tagment DNA Enzyme and Buffer Small Kit (Illumina) for 30 minutes at 37°C ...
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bioRxiv - Genetics 2020Quote: ... MS-103-2003) at a concentration of 15 nM with addition of 15% Phix control v3 (Illumina, FC-11-2003). The Illumina Mi-Seq post-run processing uses the barcoded indices to split all sequences by sample and generate FASTQ files ...
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bioRxiv - Genetics 2021Quote: ... 3) SpliceAI (SAI)11 scores were retrieved using a script adapted from the SAI github repository (https://github.com/Illumina/SpliceAI) which allows spliceAI to score custom sequences ...
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bioRxiv - Genetics 2020Quote: ... Libraries that passed quality checks were then subjected to deep sequencing (8-47 × genome coverage; 19 × mean coverage, 11 × median coverage) by HiSeq 2500 (Illumina) or NovaSeq 6000 platforms (Illumina).
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bioRxiv - Genetics 2020Quote: ... MS-103-2003) at a concentration of 15nM with the addition of 15% Phix Control v3 (Illumina, FC-11-2003) previously described by Shaukat et al ...
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bioRxiv - Evolutionary Biology 2021Quote: ... a panel of 13 SNPs located in the MHC class IIa region haplotypes including 11 SNPs from the Ovine Infinium high density SNP array (Illumina) and two other SNPs located within DQA1 gene were selected to impute eight haplotypes using Kompetitive Allele-specific PCR (KASP ...
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bioRxiv - Microbiology 2022Quote: ... MS-103-2003) at a concentration of 15nM with the addition of 15% Phix Control v3 (Illumina, FC-11-2003) described by Chaudhry et al ...
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bioRxiv - Genomics 2021Quote: ... DNA was PCR amplified for a total of 11-13 cycles using barcoded primers (Illumina Nextera XT Index Kit v2) and purified using Ampure beads (1.4:1 beads:sample ratio) ...
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bioRxiv - Plant Biology 2024Quote: ... RNA-seq libraries (Illumina Truseq RNA) preparation and pair-end sequencing were performed at MACROGEN-EUROPE (Macrogen ...
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bioRxiv - Cell Biology 2020Quote: ... The adapter-ligated library was completed by PCR with Illumina PE primers (8-11 cycles) and the resulting directional cDNA libraries were sequenced for 50 bases in a single-read format (Illumina HiSeq2000) and analyzed with nextpresso (Graña ...
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bioRxiv - Genomics 2023Quote: ... The genome of TY-11 was sequenced using a whole-genome (WGS) strategy (30-fold genome coverage) with NextSeq 550 (Illumina, USA).
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bioRxiv - Evolutionary Biology 2021Quote: ... we combined 3 μl of each sample (approx 2.24 ng) with a small quantity of a Nextera™ tagment DNA enzyme (Illumina catalogue #15027865). To decrease costs ...
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bioRxiv - Genomics 2020Quote: ... using 5% PhiX without dark cycles (n = 11) or 10-20% PhiX with 7 dark cycles (protocol provided by Illumina, n = 49). A maximum of 12 samples were pooled in one sequencing run resulting in 19.05 million [17.05 – 21.72] single-end reads per sample on average (supplementary table 3).
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bioRxiv - Bioengineering 2022Quote: ... libraries were pooled at a ratio of 80% cellular RNA to 20% oligonucleotide barcoded antibodies and sequenced with NextSeq 1000/2000 kit (Illumina) using the following read length ...
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bioRxiv - Genomics 2020Quote: ... Strand-specific total RNA-seq libraries from ribosomal RNA-depleted RNA were prepared using the TruSeq Stranded Total RNA Library kit (Illumina) according to the manufacturer-supplied protocol ...
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bioRxiv - Systems Biology 2021Quote: ... Strand-specific total RNA-seq libraries from ribosomal RNA-depleted RNA were prepared using the TruSeq Stranded Total RNA Library Prep kit (Illumina) according to the manufacturer-supplied protocol ...
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bioRxiv - Molecular Biology 2020Quote: ... RNA was depleted of ribosomal RNA (Ribozero, Illumina) and used for generation of stranded RNA sequencing libraries ...
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bioRxiv - Genetics 2024Quote: ... RNA sequencing (RNA-seq) was performed by Illumina NovaSeq 6000 ...
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bioRxiv - Immunology 2024Quote: ... TRB sequencing was performed on pools of libraries from 11 - 15 tumor or skin samples on the Illumina MiSeq platform using a v3 150-cycle kit (Illumina, San Diego, CA) in the FHCC Genomics Core Facility (Seattle ...
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bioRxiv - Genomics 2024Quote: ... 11 μL Nuclease-free water and 2 μL RP1 and RPIx primers each (10 mM, for details see Illumina smallRNA indexing primer sequences) to the 10 μL single-stranded DNA product ...
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bioRxiv - Genomics 2020Quote: ... and 8 to 11 kb were generated using the gel selection-based protocol of the Nextera mate pair kit (Illumina, San Diego, CA, USA) and a 0.6% agarose gel in accordance with the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2022Quote: RNA sequencing (RNA-seq) libraries were prepared using the TruSeq RNA Sample Preparation Kit v2 (Illumina) using the stranded protocol ...