Labshake search
Citations for Illumina :
2501 - 2550 of 5691 citations for TD 5108 CAS 866933 46 2 99% since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2023Quote: ... which were converted to de-multiplexed “fastq” files using Bcl2fastq2 Conversion Software (Illumina, San Diego, CA). Space Ranger 1.3.1 (10X Genomics ...
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bioRxiv - Neuroscience 2022Quote: ... cDNA libraries were prepared and sequenced on an Illumina NovaSeq 6000 (Illumina, San Diego, CA, USA) using a 28 bp + 120 bp paired-end sequencing mode.
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bioRxiv - Molecular Biology 2022Quote: Single-end sequencing was performed in the Illumina HiSeq 1500 system (Illumina, San Diego, CA, USA) with a coverage of 74 bp ...
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bioRxiv - Microbiology 2022Quote: ... Library preparation was performed using a Nextera XT DNA Library Preparation Kit (Illumina Inc., CA, USA) according to the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2022Quote: ... Sequencing libraries were produced using the TruSeq RNA Sample Preparation kit v2 (Illumina, San Diego, CA), according to the manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Library preparation used the Illumina TruSeq RNA Library Preparation Kit v2 (Illumina, San Diego, CA, USA) and 200 bp inserts ...
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bioRxiv - Microbiology 2024Quote: ... Paired-end 150-bp sequencing was performed using the NovaSeq6000 system (Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2024Quote: ... Paired-end 150-bp sequencing was performed using the NovaSeq6000 system (Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2024Quote: ... following the Illumina Nextera XT DNA Library Preparation protocol (Cat. FC-131-1024, Illumina, CA, USA). For DNA tagmentation ...
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bioRxiv - Cancer Biology 2024Quote: ... Paired-end 100 bp sequencing was performed on a HiSeq2500 sequencer (Illumina Inc., San Diego, CA). The analysis of WES data was performed as previously described71 ...
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bioRxiv - Plant Biology 2024Quote: ... constructed sequencing libraries using an Illumina Stranded mRNA Prep kit (Illumina, Inc. San Diego, CA, USA), and sequenced all 18 libraries on a NovaSeq 6000 (Illumina ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed on an Illumina NovaSeq 6000 PE150 platform (Illumina Inc. San Diego, CA, USA), and 150 bp paired-end raw files were obtained ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Sequencing of the libraries was performed on a NextSeq 500 system (Illumina, San Diego Ca, USA) in mid-output mode ...
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bioRxiv - Microbiology 2024Quote: ... the 16S rRNA gene V3 region was amplified using the Nextera Index Kit (Illumina, CA, USA) compatible forward primer nxt388_F:(5’-TCGTCGGCAG CGTCAGATGT GTATAAGAGA CAGACWCCTA CGGGWGGCAGCAG-3’ ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were prepared using the TruSeq RNA Sample Prep Kit v2 (Illumina, San Diego, CA, USA) according to the manufacturer’s guidelines ...
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bioRxiv - Genomics 2023Quote: ... while Illumina sequencing was conducted on a HiSeq 2000 platform (Illumina, Inc, San Diego, CA, USA) at NGS Soluções Genômicas ...
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bioRxiv - Evolutionary Biology 2024Quote: ... on a 2x150 bp SP line on an Illumina NovaSeq sequencer (Illumina, San Diego, CA, USA) at the GenomiX platform in Montpellier ...
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bioRxiv - Genetics 2024Quote: ... RNA-Seq libraries were generated using the TruSeq RNA Sample Prep Kit (Illumina, San Diego, CA). Low-quality bases were trimmed using Trim-galore ...
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bioRxiv - Cancer Biology 2023Quote: ... 50 bp sequencing was performed on an Illumina HiSeqV4 SR50 sequencer (Illumina, San Diego, CA, USA). After quality control of raw data with FastQC and removal of adapters and low-quality reads with Trimmomatic (version 0.36) ...
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bioRxiv - Neuroscience 2023Quote: RNA-seq libraries were prepared using TruSeq RNA Library Prep Kit v2 (Illumina, San Diego, CA) and sequenced on an Illumina NovaSeq platform with 151 bp paired-end reads with an average of ∼135 million reads per library.
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bioRxiv - Microbiology 2024Quote: ... Paired-end sequencing was performed on Illumina NovaSeq/Hiseq Xten (Illumina Inc., San Diego, CA, USA) at Majorbio Bio-Pharm Technology Co. ...
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bioRxiv - Genetics 2024Quote: ... RNA samples were processed using TruSeq RNA sample preparation kits v2 (Illumina, San Diego, CA, USA). Libraries were quantified by real-time PCR using the KAPA Library Quantification Kit for Illumina Sequencing Platforms (Roche ...
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bioRxiv - Evolutionary Biology 2023Quote: ... and IDT for Illumina – TruSeq® DNA UD Indexes v1 (Illumina Inc., San Diego, CA, USA). The libraries were pooled and sequenced with a paired-end 150 bp strategy on two Illumina NovaSeq 6000 S4 flowcells for 1.3 T of paired-end raw read data each ...
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bioRxiv - Microbiology 2023Quote: ... Illumina libraries were prepared using a Nextera XT DNA Library Preparation Kit (Illumina, San Diego, CA) and sequenced on the NextSeq550 platform ...
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bioRxiv - Neuroscience 2023Quote: ... Transcriptome data were measured with Illumina HumanHT-12 V3 bead chips (Illumina, San Diego, CA, USA). Proteome data were measured by liquid chromatography-mass spectrometry (LC-MS/MS) ...
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bioRxiv - Evolutionary Biology 2023Quote: ... rRNA depletion was performed using the Ribo-Zero (Yeast) rRNA Removal Kit (Illumina, San Diego, CA) and libraries were generated according to the TruSeq Stranded Total RNA kit and purified using a Axygen AxyPrep MAG PCR Clean-Up Kit (Axygen) ...
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bioRxiv - Evolutionary Biology 2023Quote: ... library preparation and sequencing was undertaken using a HiSeq 2500 instrument (Illumina, San Diego, CA, USA) by MicrobesNG (Birmingham ...
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bioRxiv - Cancer Biology 2024Quote: ... and sequenced on NextSeq500 sequencers using 75□bp paired-end sequencing method (Illumina, San Diego, CA). For transcriptomic analyses ...
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bioRxiv - Cancer Biology 2024Quote: ... a sequence library was prepared using the TruSeq Nano DNA Kit (Illumina, San Diego, CA, USA), and next-generation sequencing analysis was conducted using a NovaSeq 6000 (150-bp pair-end reads ...
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bioRxiv - Cancer Biology 2024Quote: ... and mRNA expression was determined with the HT-12 v4 chip (Illumina, San Diego, CA, USA). Chromosome 3 status was obtained with Single-nucleotide polymorphism analysis ...
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bioRxiv - Cell Biology 2024Quote: ... Sequencing of the mRNA libraries was performed in a HiSeq2500 (Illumina Inc, San Diego, CA, USA) to obtain at least 30 million 51nt-single-end reads per sample ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were constructed using the Nextera XT Library Prep Kit (Illumina, San Diego, CA, USA), normalized and denatured for loading in a NextSeq 500/550 Mid Output v2.5 Kit (300 cycles ...
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bioRxiv - Microbiology 2023Quote: ... Nextera indices were added to purified DNA fragments per the manufacturer’s protocol (Illumina, San Diego, CA). The indexed fragments were purified using AMPure XP Beads according to the manufacturer’s protocol (Beckman Coulter ...
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bioRxiv - Microbiology 2023Quote: ... MiSeq Reagent Kit v3 was used according to the manufacturer’s instruction (Illumina Inc., San Diego, CA) and paired-end 250 bp sequences were generated ...
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bioRxiv - Microbiology 2023Quote: ... Ribosomal RNA depletion was performed with Ribo-Zero Plus rRNA Removal Kit (Illumina Inc., CA, USA). Samples were primed and fragmented based on the recommendation of the manufacturer ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation was performed according to Illumina’s TruSeq DNA Sample Preparation Guide (Illumina, San Diego, CA). Single-end sequence reads of approximately 50 bp were obtained ...
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bioRxiv - Microbiology 2023Quote: ... coli isolate was pooled together and sequenced on an Illumina MiSeq platform (Illumina, San Diego, CA) using 2 x 250 or 2 x 300 paired-end approach ...
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bioRxiv - Molecular Biology 2023Quote: ... we used an Illumina Tru-Seq™ RNA Sample Preparation Kit (Illumina, San Diego, CA, USA) to generate sequencing libraries ...
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bioRxiv - Cancer Biology 2023Quote: ... Pooled libraries were sequenced on a NovaSeq6000 SP 100-cycle flow cell (Illumina, San Diego, CA).
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bioRxiv - Cancer Biology 2023Quote: ... Pooled libraries were sequenced using a NovaSeq6000 SP 100-cycle flow cell (Illumina, San Diego, CA).
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bioRxiv - Cell Biology 2023Quote: ... analysis and were sequenced in paired end mode on a NovaSeq instrument (Illumina, San Diego, CA) targeting a depth of 50,000-100,000 reads per cell.
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bioRxiv - Microbiology 2023Quote: Libraries were prepared using the Nextera XT DNA Library Prep Kit (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions with the difference of using one quarter of each reaction volume ...
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bioRxiv - Genomics 2023Quote: RNA samples were processed using the TruSeq RNA sample preparation kit (Illumina, San Diego, CA, USA). The protocol involved quantification of RNA by capillary electrophoresis and polyA amplification to select RNA over DNA ...
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bioRxiv - Cancer Biology 2023Quote: ... Paired-end 100 bp sequencing reads were generated using the Illumina NovaSeq 6000 machine (Illumina, CA). RNA-Seq read pre-processing was done using fastp with low complexity filters set and trimmed from both 3’ and 5’ ends.50 Reads were then aligned to human genome gencode v40 using STAR aligner in gene quantification mode with 2 pass enabled.51 Differential expression was performed using R package edgeR.52 Pathway enrichment was completed using Hallmark Gene Set from MsigDB and p-values were calculated via hypergeometric distribution.53
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bioRxiv - Microbiology 2023Quote: ... Genomic DNA libraries were constructed using Nextera XT Library Preparation Kit (Illumina, San Diego, CA USA) and the libraries were sequenced on a MiSeq Device (Illumina ...
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bioRxiv - Plant Biology 2023Quote: ... Libraries were prepared with the Illumina TruSeq DNA Protocol (Illumina Inc., San Diego, CA, United States) and targeted fragments were sequenced with V4 chemistry in paired-end 150-bp mode on an Illumina HiSeq 2500 (Illumina Inc. ...
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bioRxiv - Systems Biology 2023Quote: ... The library was then sequenced on an Illumina NextSeq 500 Sequencing System (Illumina, San Diego, CA) with the Mid-output 300 cycle paired-end sequencing run type ...
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bioRxiv - Genetics 2024Quote: ... We performed multiplex sequencing using an Illumina HiSeq X-Ten sequencer (Illumina, San Diego, CA, USA). Variant calling and annotation were done in-house using the Peking Union Medical College Hospital Pipeline (PUMP ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation was done using Illumina TruSeq Stranded mRNA kit (Illumina Inc., San Diego, CA, USA) and sequenced using the High Output 1×75 kit on the Illumina NextSeq 500 platform producing 75 bp single-end reads ...
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bioRxiv - Cancer Biology 2023Quote: ... DNA libraries for sequencing were prepared using the TruSeq DNA library Prep Kit (Illumina, CA, USA) and quantified using the KAPA Library Quantification kit (KAPA Biosystems ...