Labshake search
Citations for Illumina :
1551 - 1600 of 2411 citations for 7 3 2 3 5 dihydroxyphenyl 2 hydroxyethyl amino propyl 3 7 dihydro 1 3 dimethyl 1H purine 2 6 dione monohydrochloride since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2021Quote: ... Equimolar normalization of each pool and sequencing was performed at the BYU DNA Sequencing center on a partial 2 × 250 lane (v2) of a HiSeq 2500 (Illumina, Inc., San Diego, CA). Laser complexity was assured by including at least 10% of each lane with shotgun sequencing libraries for other bacterial genomes ...
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bioRxiv - Evolutionary Biology 2020Quote: ... lactis MG1363 and of the genomes of the bacteriophages studied here were determined using the Illumina MiSeq platform with 2 x 150-bp paired-end sequencing (Illumina, San Diego, CA, USA). Nucleotide sequences were trimmed using Trimmomatic (21 ...
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bioRxiv - Molecular Biology 2020Quote: ... 13 pM library was loaded on the Illumina MiSeq® with 10% PhiX using a 2 × 300 bp V3 chemistry (Illumina Inc., CA, USA).
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bioRxiv - Genomics 2021Quote: ... We performed the cfMeDIP-seq experiment as previously described.2 Samples underwent sequencing (Princess Margaret Genomics Centre, Toronto, ON, Canada) on a NovaSeq 6000 (Illumina, San Diego, CA, USA), paired-end 2×100 bp ...
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bioRxiv - Microbiology 2021Quote: ... the amplicons were purified and sequenced on a MiSeq flow cell using Reagent Kit v3 and 2×300 pair-end reads (Illumina Inc., San Diego, USA) according to the manufacturer’s instructions at the Göttingen Genomics Laboratory (G2L ...
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bioRxiv - Microbiology 2020Quote: ... Illumina MiSeq sequencing was performed at the Genome Institute of Singapore according to the MiSeq reagent kit v2 (2 × 250 bp) preparation guide (Illumina, San Diego, CA, USA).
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bioRxiv - Genomics 2022Quote: ... and 2 x 300 bp paired-end sequence reads with mean coverage of 100x were generated on Miseq platform (Illumina, San Diego, CA, USA). De novo assembly was performed with SPAdes v3.9.0 using k-mers of 101 ...
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bioRxiv - Microbiology 2022Quote: ... Sequence reads were obtained from the Illumina NovaSeq platform based on 2 × 250 bp cycles and the NovaSeq 6000 SP Reagent Kit (500 cycles, Illumina, San Diego CA, USA). Further analysis was performed using the QIIME 2 standard pipeline (Version 2020.11)45.
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bioRxiv - Microbiology 2022Quote: ... Extracted DNA was sent to the University of Illinois Keck Center for paired-end (2□×□250 bp) sequencing on an Illumina NovaSeq (Illumina, San Diego, CA, USA). The 16S rRNA gene fragment was amplified using the primers V3_F357_N ...
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bioRxiv - Microbiology 2022Quote: ... 16S rRNA genes were PCR-amplified using primers 341f and 785r [29] and sequenced on the Illumina Miseq platform (Miseq Reagent Kit v3, 2×300 bp; Illumina, San Diego, CA, USA).
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bioRxiv - Physiology 2022Quote: ... Sequencing was performed on the NextSeq 500 with the High Output Reagent Cartridge v2 150 cycles (75bp x 2) (Illumina, San Diego, CA, USA). Linux Ubuntu operating system version 14.04 LTS was used for analyses ...
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bioRxiv - Microbiology 2022Quote: ... Shotgun metagenomic sequencing paired-end libraries were constructed and sequenced as 2×150 bp using the Illumina NovaSeq platform (Illumina Inc, San Diego, CA) at the Edmund Mach Foundation (San Michele all’Adige ...
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bioRxiv - Neuroscience 2023Quote: ... for 16p11.2 del/+ mice were prepared using the Illumina TruSeq Stranded Total RNA with Ribo-Zero gold sample preparation kit (Illumina, Inc., San Diego, CA). Pooled libraries were sequenced on Illumina NovaSeq 6000 sequencers with 100-bp Paired-End chemistry (Illumina) ...
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bioRxiv - Molecular Biology 2022Quote: ... terrestris was performed using paired-end (PE) 2×150 bp on Illumina HiSeq platform according to house build protocol (Illumina, San Diego, California, USA) (Crawford et al ...
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bioRxiv - Zoology 2024Quote: ... the samples and negative controls were pooled and subjected to sequencing on the NextSeq 2000 platform (2 × 100 cycles) (Illumina, San Diego, CA, USA).
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bioRxiv - Immunology 2024Quote: ... The libraries were then pooled at 5nM and sequenced on an Illumina NextSeq 2000 instrument at a 600pM input and 2% PhiX spike in using a P3 100 cycle flow cell (Illumina, San Diego, CA, USA) resulting in 36000-58000 reads per cell.
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bioRxiv - Evolutionary Biology 2024Quote: ... The libraries were then shipped to Admera Health and were paired-end sequenced (2 × 150 bp) on a lane of the NovaSeq X instrument (Illumina, Inc., San Diego, CA).
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bioRxiv - Genetics 2024Quote: ... The library was sequenced with a paired-end (2 × 150 bp) setting using the Illumina X Ten Sequencing System (Illumina, San Diego, CA, USA). The transcriptome data of muscle tissue in 131 hybrid individuals was obtained using DNA nanoball (DNBSEQ-T7 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... NGS libraries were constructed from genomic DNA using the Nextera protocol34 and the Illumina NextSeq 500 platform with 2 x 151 bp runs (Illumina, San Diego, CA, USA). We additionally sequenced with PacBio long-read sequencing on an RSII instrument (Pacific Biosciences ...
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bioRxiv - Microbiology 2024Quote: ... 16S rRNA and ITS2 amplicon DNA was shipped on dry ice to Michigan State University’s Genomics Core (East Lansing, MI, USA) for library preparation and paired-end sequencing on a MiSeq (2 × 300 bp, Illumina, San Diego, CA, USA). Demultiplexed 16S and ITS2 sequences were processed using the DADA2 pipeline in R version 4.1.3 to construct amplicon sequence variants (Martin 2011 ...
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bioRxiv - Synthetic Biology 2023Quote: ... libraries with insert sizes of 250 bp or greater were sequenced using 2×300 paired-end reads on an Illumina MiSeq using a MiSeq Reagent Kit v3 (Illumina Inc, MS-102-3003). Libraries with insert sizes of less than 250 bp were sequenced using 2×150 paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... Samples were then sequenced in a 2 × 75 bp arrangement with a High Output Flow Cell on an Illumina NextSeq 550 system (Illumina, San Diego, CA, USA) at the LuxGen sequencing platform (Dudelange ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing was carried out using the Illumina technology at the Glasgow Polyomics sequencing facility using a standard flow cell and 600 cycle v3 reagent cartridge for 2 x 300 bp (base pair) reads on an Illumina MiSeq instrument (Illumina Inc., Hayward, California, USA).
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bioRxiv - Microbiology 2023Quote: An equimolar pool of libraries was subjected to Illumina sequencing (2 ✕ 100 bp, paired ends) with a NovaSeq 6000 instrument and an SP flowcell (Illumina, San Diego, California, USA). Sequencing was carried out by the sequencing core facility of the Leibniz Institute on Aging - Fritz Lipmann Institute ...
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bioRxiv - Immunology 2023Quote: ... alpha/beta libraries were prepared on 100 ng of RNA from each sample using the SMARTer Mouse TCR α/β Profiling Kit from Takarabio® and sequenced using the MiSeq V2 2×150bp (Illumina®) and HiSeq2500 V2 2×150bp (Illumina® ...
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bioRxiv - Plant Biology 2023Quote: ... The final 9pM library was sequenced on an Illumina MiSeq platform using Reagent Kit v3 (2 x 300 cycles; Illumina, San Diego, CA, USA), following manufacturer’s instructions.
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bioRxiv - Evolutionary Biology 2023Quote: ... The library was pooled with other samples at equimolar concentrations and sequenced at 4 nM as single lanes on Illumina NovaSeq 6000 S4 platform (2×150; Illumina Inc., San Diego, CA). The library for long-read data was prepared using the Nanopore ligation kit ...
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bioRxiv - Cancer Biology 2023Quote: 0.5×105 MIA PaCa-2 cells for each treated condition/replicate infected was collected and treated with transposase Tn5 (Nextera Tn5 Transposase; Illumina Cat #FC-121-1030). DNA was purified using AMPure XP beads to remove large fragments (0.5 × beads ...
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bioRxiv - Microbiology 2023Quote: ... The final libraries of each pool were sequenced (2 × 300 bp paired-end reads) using the Illumina MiSeq sequencing platform (Illumina, San Diego, California, USA) at the Bioengineering Lab (Atsugi ...
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bioRxiv - Immunology 2024Quote: Illumina RNAseq libraries were prepared from 2 μg total RNA using the Illumina TruSeq™ RNA Sample Prep Kit v2 according to the manufacturer’s instructions (Illumina Inc. San Diego, CA). All RNAseq libraries (150-750 bp inserts ...
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bioRxiv - Microbiology 2024Quote: ... amplicon libraries were made from polymerase chain reactions of the 16S rRNA gene using barcoded 515F and 926R universal primers (Parada et al. 2016) and paired-end sequenced with MiSeq v2 2×250 technology (Illumina, San Diego, CA, USA). Genomic DNA from a subset of 32 of the 368 total samples collected between 2017-2021 were used for metagenomic sequencing ...
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bioRxiv - Genomics 2024Quote: ... Whole genome sequencing was performed to generate 2×150 bp paired-end (PE) reads with the Novaseq 6000 system (Illumina, San Diego, CA, USA) by AZENTA ...
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bioRxiv - Molecular Biology 2024Quote: ... Whole-genome sequences were obtained (MiSeq Desktop Sequencer, 2×250 v2 paired-end chemistry and the Nextera XT DNA Library Preparation Kit, Illumina, San Diego, California, US) per manufacturer’s instructions.
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bioRxiv - Microbiology 2024Quote: Paired-end libraries (2×151 bp) were prepared for a subset of samples using Illumina TruSeq DNA library preparation kit (Illumina, San Diego, CA, USA) and sequenced on the Illumina NextSeq500 platform ...
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bioRxiv - Molecular Biology 2024Quote: ... Uniquely indexed sample libraries were pooled together in equimolar amounts and sequenced in parallel on an Illumina NextSeq instrument using a 600 cycle (2×300) P1 kit (Illumina, San Diego, CA, US).
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bioRxiv - Plant Biology 2020Quote: ... Two lanes of paired-end (2×150 bp) sequencing of the cDNA libraries were performed on the Illumina HiSeq 2000 (Illumina Inc., San Diego, CA, USA). Library preparation and sequencing were performed by AgriLife Genomics and Bioinformatics Services (Texas A&M University ...
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bioRxiv - Molecular Biology 2021Quote: ... Library preparation was as previously described and library sequencing performed using the Illumina MiSeq platform with the 2 × 300v3 Reagent Kit (Illumina Inc., San Diego, CA, USA) (Avramenko et al. ...
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bioRxiv - Microbiology 2020Quote: ... A paired-end sequencing library (2×250bp) was created using a VAHTS Universal DNA Library Prep kit for Illumina® (Illumina, San Diego, CA, USA) and sequenced within an Illumina HiSeq system (Illumina Inc.).
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bioRxiv - Genomics 2020Quote: ... 7.8 and 15.2 kb) were prepared using Illumina TruSeq DNA LT Sample Prep Kits and Nextera Mate Pair Sample Preparation Kits (Illumina Inc., San Diego, CA, USA), following the manufacturer’s protocols ...
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bioRxiv - Zoology 2019Quote: ... Library preparation was as previously described and library sequencing performed using the Illumina MiSeq platform with the 2×250 v2 Reagent Kit (Illumina Inc., San Diego, CA, USA) (Avramenko et al. ...
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bioRxiv - Physiology 2021Quote: ... Purified amplicons were pooled in equal molar and paired-end sequenced (2×300) on an Illumina MiSeq platform (Illumina Inc., San Diego, CA, United States) at Allwegene Technology Inc ...
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bioRxiv - Cell Biology 2021Quote: Total RNA purified from hippocampi of WT and Atf6b−/− mice (n=2 per group) was used to prepare RNA libraries using a TruSeq Stranded mRNA Sample Preparation Kit (Illumina, Inc., San Diego, CA, USA), with polyA selection for ribosomal RNA depletion ...
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bioRxiv - Cancer Biology 2020Quote: ... The 3-cell control sample was sequenced on an Illumina MiSeq using a v2 300-cycle kit in 2×150 bp paired-end mode (Illumina, cat. no. MS-102-2002). For the patient samples ...
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bioRxiv - Molecular Biology 2022Quote: ... Bulk and STORM-seq K562 libraries were pooled and 2×50 bp sequencing was performed on an Illumina NovaSeq 6000 sequencer using a 100 bp S2 sequencing kit (Illumina Inc., San Diego, CA, USA). The HEK293T ...
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bioRxiv - Molecular Biology 2022Quote: The manually prepared K562 single cells were pooled and sequenced using 2×75 bp sequencing on an Illumina NextSeq 500 (Illumina Inc., San Diego, CA, USA). Base calling was done by Illumina NextSeq Control Software (NCS ...
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bioRxiv - Cancer Biology 2022Quote: ... Libraries were run in the Rapid Run flow cell and sequenced with paired-end sequencing (2×76 bp) on HiSeq 1500 (Illumina, San Diego, CA 92122 USA).
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bioRxiv - Synthetic Biology 2019Quote: Illumina TruSeq amplicon library preparation was performed for the separate and co-amplified sample individually and the two indexed experiments were sequenced together by the company Microsynth (Illumina MiSeq, v2 micro, 2×150bp) to yield 9369162 past filter reads with an average length of 147 bp and a 95.2% Q30 quality score.
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bioRxiv - Cell Biology 2020Quote: ... Libraries were diluted to 2 nM in each and pooled with equal volume before sequenced on Hiseq X Ten (Illumina, Inc., San Diego, CA, USA) with 150-bp pair-end strategies.
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bioRxiv - Evolutionary Biology 2021Quote: ... Libraries were enriched for these loci using the MyBaits protocol (Arbor Biosciences, Ann Arbor, MI, USA) and sequenced on an Illumina MiSeq (2 x 300 cycles, v3 chemistry; Illumina, Inc., San Diego, California, USA). Raw reads have been deposited at the NCBI Sequence Read Archive (BioProject PRJNA544074 ...
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bioRxiv - Immunology 2021Quote: ... Paired end (2×300 cycle) sequencing was performed on a Miseq® sequencer using a 600 cycle v3 Reagent Kit (Illumina Inc., San Diego CA) producing 300 base paired end reads.