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Citations for Illumina :
1151 - 1200 of 1852 citations for 5 Methyl 3 phenylmethylene 2 3H furanone since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Synthetic Biology 2022Quote: ... normalized to 20 ng/μL and sent to Genewiz for Amplicon-EZ sequencing service (Illumina HiSeq 2×150). This service typically returns 40,000 sequences however in some cases fewer than 40,000 sequences were returned ...
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bioRxiv - Molecular Biology 2023Quote: ... A 2 µl aliquot of the denatured library pool is then added to 1 ml of HT1 (Illumina), mixed and 120 µl is added to the ‘sample library’ cBot strip tube ...
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bioRxiv - Cancer Biology 2024Quote: ... 2 µg of total RNA were depleted for ribosomal RNA using a Ribo-Zero-rRNA removal kit (Illumina), followed by random primed cDNA synthesis ...
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bioRxiv - Microbiology 2022Quote: ... The cleaned pool was sequenced on the Illumina MiSeq using v.2 2_250 base-pair kit (Illumina, Inc). Two PCR controls were also sequenced to test for PCR reagent contamination.
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bioRxiv - Microbiology 2022Quote: ... and then sequenced on a single lane of a NovaSeq S4 2×150 flow cell (NovaSeq 6000, Illumina) with at least 50 million reads per sample.
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bioRxiv - Genomics 2023Quote: ... The nuclei pellets were resuspended in 50μl of transposition buffer (25μl of 2× TD buffer, 22.5μl of distilled water, 2.5 μl of Illumina Tn5 transposase) and incubated at 37 °C for 30 min with shaking at 1000 rpm for fragmentation ...
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bioRxiv - Microbiology 2024Quote: ... The PCR products were then sent to Biofidal sequencing company for purification and 2×300bp Miseq sequencing (Illumina). A total of 12,836,921 and 14,248,382 reads were obtained from 16S and 18S rDNA respectively and were demultiplexed using the Mothur pipeline (69 ...
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bioRxiv - Cancer Biology 2022Quote: ... 20,000 to 50,000 cells were lysed in the transposase reaction mix (12.5 μl 2xTD buffer, 2 μl TDE1 [Illumina] ...
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bioRxiv - Microbiology 2023Quote: ... Paired-end sequencing (2 × 150 or 250 cycles) was performed using the NextSeq 550 or MiSeq system (Illumina).
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bioRxiv - Microbiology 2022Quote: ... and sequenced using 500 cycles on a HiSeq 2500 (2 × 250 bp) system (Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2023Quote: ... and paired-end sequenced (2 × 300 bp) on a MiSeq sequencer using the MiSeq Reagent kit V3 (Illumina). Geneious was used to trim the sequencing data (using BBduk ...
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bioRxiv - Microbiology 2023Quote: ... The DNA library was paired-end sequenced (2 x 151 bp) on a NovaSeq S4 system (Illumina, USA). A long-read sequencing library was prepared according to the SQK-LSK110 protocol (ONT ...
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bioRxiv - Zoology 2023Quote: ... and subsequently paired-end (2×150 bp) sequenced on a NovaSeq 6000 instrument (Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2023Quote: ... The 16S rRNA gene amplicons were sequenced using the 2 x 300 bp paired-end MiSeq protocol (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... Samples were then amplified and paired-end sequencing (2 x 41 cycles) was performed on NextSeq 500 (Illumina). See Supplementary Table 2 for sequenced ATAC-seq samples.
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bioRxiv - Genomics 2023Quote: ... Samples were multiplexed and sequenced with 2×75 bp pair-end reads on a NextSeq 500 instrument (Illumina).
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bioRxiv - Plant Biology 2023Quote: ... where they were subsequently sequenced on a MiSeq instrument (v3 cell, paired-end 2 × 300 bp; Illumina, USA). The raw sequencing data is available from the European Nucleotide Archive (http://www.ebi.ac.uk/ena ...
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bioRxiv - Genomics 2023Quote: ... using the S2 Reagent Kit v1.5 Paired End 2×50 base (100 cycle) sequencing kit (Illumina cat. #20028316). Sequencing parameters were set for R1 at 28 cycles ...
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bioRxiv - Molecular Biology 2023Quote: ... The pellet was then resuspended in the transposition reaction mix (25 μL 2× TD buffer, 2.5μLTn5 Transposes (Illumina) and 22.5μL nuclease-free water ...
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bioRxiv - Biophysics 2023Quote: ... at the UNMC Sequencing core using miSeq reagent kit v3 (600 cycles) 2 x 300 read length (Illumina). The total number of reads were 1-2 million reads per sample.
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bioRxiv - Cell Biology 2023Quote: ... The supernatants were carefully removed and the pellets were re-suspended in 25 μL of transposase reaction mix (12.5 μL 2×TD buffer, 1.25 μL TN5 transposase (Illumina) and 11.25 μL nuclease-free water) ...
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bioRxiv - Microbiology 2022Quote: ... The quality of paired-end reads obtained from MiSeq sequencing was analyzed by using Qiagen CLC Genomics Workbench 22.0.1 and the Identify ARTIC V3 SARS-CoV-2 Low Frequency and Shared Variants (Illumina) workflow was used in genetic variant analyses ...
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bioRxiv - Microbiology 2023Quote: ... The recovered DNA fragments were sequenced using the MiSeq 500PE v.2 kit (Illumina, San Diego, CA, USA). Short-read sequences from each PCR fragment were assembled using Spades v 3.1(31) ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were sequenced at low-pass (2x 50bp paired end) targeting 2 million reads on a NextSeq (Illumina) instrument ...
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bioRxiv - Plant Biology 2024Quote: ... The final pool was run at 750 pM with 2% PhiX control library on a NextSeq 2000 (Illumina) with a P3 300 cycle kit ...
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bioRxiv - Plant Biology 2024Quote: ... Amplicons were sequenced (2×250 bp) on a NovaSeq 6000 SP flow cell (Illumina, San Diego, CA, USA). Each “batch” of 96 samples (n=6 ...
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bioRxiv - Cell Biology 2024Quote: ... and a 2 pM solution of this pool was sequenced unidirectionally on a NextSeq® 500 System (Illumina) at GeneCore ...
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bioRxiv - Immunology 2024Quote: ... Purified RNA was submitted to Azenta Life Sciences/Genewiz for library preparation and sequencing (Illumina HiSeq 2×150bp).
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bioRxiv - Microbiology 2024Quote: ... and paired-end sequencing (300 bp × 2) on the MiSeq platform with the MiSeq Reagent Kit v3 (Illumina) were conducted as described previously [31] ...
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bioRxiv - Molecular Biology 2024Quote: ... using a paired-end read length of 2 × 150bp with the HiSeq Reagent Kits (Illumina, San Diego, California) (Cogne et al ...
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bioRxiv - Immunology 2021Quote: ... 1.5 ng cDNA was tagmented using 0.5 μl TruePrep Tagment Enzyme V50 and 1x TruePrep Tagment Buffer L (TruePrep DNA Library Prep Kit V2 for Illumina, Vazyme), followed by an incubation step at 55 °C for 10 min ...
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bioRxiv - Cell Biology 2021Quote: ... Nuclei were collected by centrifugation and subjected then to transposition reaction in 1x Tagment DNA buffer containing 5% Tn5 Transposase (Illumina, 20034197), 0.1% Tween-20 ...
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bioRxiv - Microbiology 2021Quote: Purified PCR products were given unique dual indexes at the 5’ end using the Nextera XT Index Kit v2 index primers (Illumina, USA). To attach the index primers ...
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bioRxiv - Genomics 2022Quote: ... pH 7.4, 5 mM MgCl2, 10% dimethyl formamide, 0.33x PBS, 0.01% digitonin, 0.1% Tween-20, 100 nM Illumina Tn5 Transposase (Illumina, 20034197)) ...
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bioRxiv - Bioengineering 2019Quote: ... incubated and room temperature for 5 minutes and diluted again to a final concentration of 4 pM using HT1 Buffer (Illumina, USA) and loaded into the MiSeq Reagent Nano Kit v2 cartridge (Illumina ...
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bioRxiv - Immunology 2020Quote: ... Supernatant was discarded and nuclei were re-suspended in 50 μl reaction buffer containing 5.0 μl Tn5 transposase and 10 μl of 5 × TTBL buffer (TruePrepTM DNA Library Prep Kit V2 for Illumina, Vazyme Biotech). The reaction was incubated at 37°C for 30 min ...
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bioRxiv - Genomics 2021Quote: ... Samples were concentrated using a centrifugal evaporator Speed Vac® to a final volume of 5 μl and we started the TruSeq Small RNA Sample Preparation Kit (Illumina) protocol according to manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2021Quote: Sequencing libraries were prepared from 100 ng DNA using the TruSeq Nano DNA sample preparation kit (cat# 20015964/5, Illumina Inc.) targeting an insert size of 350bp ...
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bioRxiv - Cancer Biology 2020Quote: ... Extracted nuclei was processed for TN-5 mediated tagmentation using the Illumina Tagment DNA Enzyme and buffer kit (Nextera Illumina # 20034210) ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Ribosomal RNAs were depleted from 5 μg of total RNA of the sample by Ribo-Zero rRNA Removal Kit (Seed, Root) (Illumina®). After rRNA depletion ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Strand-specific library preparation (one library per sample) and paired-end (150 + 150 bp) Illumina sequencing (Illumina HiSeq 3000, 5 lanes) was then performed at the Finnish Functional Genomics Center (FFCG) ...
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bioRxiv - Genetics 2021Quote: 5× HOT FIREPol® EvaGreen® qPCR Mix Plus with ROX (Solis Biodyne) and an Eco Real-Time PCR System (Illumina) were used for qPCR ...
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bioRxiv - Genomics 2020Quote: ... the fragmented amplicons were cleaned-up and amplified by 5 cycles of PCR using specific index adapters for Illumina sequencing (Nextera™ DNA CD Indexes, Illumina) (Supplementary Figure 1B) ...
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bioRxiv - Developmental Biology 2022Quote: ... After centrifugation supernatant was used for RNA cytosolic fraction by adding to 1 ml of TRIZOL and isolated nuclei of CMs were incubated in 30 µl and of EC in 10 µl transposase mixture with 5% Nextera Tagment DNA Enzyme TDE (Illumina #15027916) in transposition buffer (20 mM Tris-HCl pH 7.6 ...
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bioRxiv - Molecular Biology 2022Quote: ... Nextera libraries (5 replicates) were constructed from 0.8 ng of pre-amplified cleaned up cDNA using Nextera XT Kit (Illumina, Eindhoven, Netherlands). Index PCR was carried out using the custom P5 primer (P5NEXTPT5 ...
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bioRxiv - Cell Biology 2024Quote: ... from islets was added to 50 μM first-strand RT primer (the sequence at the 5’ portion corresponds to primer P7 on the Illumina flowcell), 10 mM dNTP mix ...
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bioRxiv - Cell Biology 2024Quote: ... The second-strand cDNA was synthesized by adding 100 μM primer (the specific sequence at the 5′ portion corresponds to the primer for sequencing on the Illumina flowcell), 10× Taq DNA Polymerase Buffer ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing libraries were prepared from 700 ng total RNA using the TruSeq stranded mRNA library preparation kit (Cat# 20020594/5, Illumina Inc.) including polyA selection ...
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bioRxiv - Microbiology 2023Quote: ... Amplicon libraries were mixed with 5% PhiX and sequenced with MiSeq reagent kits v2 500 cycles (Illumina, San Diego, California, USA). A blank extraction kit control ...
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bioRxiv - Genomics 2023Quote: A 96-well plate pre-loaded with 5 μl of 500 nM pre-indexed Tn5 transposase per well (iTSM plate, kind gift of Illumina Inc.) was used to multiplex samples and perform barcoded transposition ...