Labshake search
Citations for Illumina :
1101 - 1150 of 1359 citations for 2 Chloro 4 fluoro 4' pyrrolidinomethyl benzophenone since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2022Quote: ... and the cleaned pool was sequenced on the MiSeq using v2 2×250 base pair kit (Illumina, Inc, San Diego, CA).
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bioRxiv - Cancer Biology 2022Quote: ... A HiSeqX system was applied and 2 × 150 base read pairs were generated using standard settings (Illumina, San Diego, CA, USA). Preprocessing was performed as described by Priestley et al (26) ...
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bioRxiv - Plant Biology 2022Quote: ... mRNAs were sequenced in a HiSeq 3000 sequencing system with 2 × 125 bp paired-end sequences (Illumina HiSeq SBS Kit v4) by the Genotoul bioinformatics platform ...
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bioRxiv - Molecular Biology 2022Quote: ... 1.5 μl of PCR 1 were used as template for PCR 2 (14 cycles) and used forward primers 5’-AATGATACGGCGACCACCGAGATCTACAC-NNNNNNNN-ACACTCTTTCCCTACACGAC-3’ (compatible to Illumina i5) and reverse primers 5’-CAAGCAGAAGACGGCATACGAGAT-NNNNNNNN-GTGACTGGAGTTCAGACGTG-3’ (compatible to Illumina i7) ...
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bioRxiv - Bioengineering 2022Quote: ... The libraries were pooled to a final concentration of 2 nM and run on a NextSeq sequencer (Illumina, San Diego, CA). The small RNA sequencing (sRNA-Seq ...
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bioRxiv - Cancer Biology 2022Quote: ... Strand-specific libraries were generated using the TruSeq Stranded mRNA sample preparation kit (Illumina Inc., San Diego, RS-122-2101/2) according to the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2024Quote: ... and then sequenced on half lane NovaSeq 6000 using the paired-end 2×50 cycle chemistry (Illumina, San Diego, CA, USA). Data is deposited under accession number PRJEB60373.
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bioRxiv - Microbiology 2024Quote: ... and shotgun-sequenced using the Illumina MiSeq platform with a read length of 2 × 150 bp (Illumina, San Diego, CA, USA). For each phage ...
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bioRxiv - Neuroscience 2022Quote: ... Strand-specific libraries were generated using the TruSeq Stranded mRNA sample preparation kit (Illumina Inc., San Diego, RS-122-2101/2), according to the manufacturer’s instructions (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... pooled equimolarily and sequenced on an Illumina MiSeq v3 2×300 base pair (bp) platform (Illumina Inc., San Diego, CA, USA).
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bioRxiv - Molecular Biology 2022Quote: ... Sequencing libraries were prepared at GenomeScan (Netherlands) and submitted to 2×150 pair-end sequencing in a NovaSeq™ 6000 sequencer (Illumina). Reads were mapped to the reference LdBPK282-V2 genome (11 ...
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bioRxiv - Molecular Biology 2023Quote: ... PCR-amplified libraries were quantified on a Bioanalyser and appropriately diluted and multiplexed for deep sequencing (Illumina MiSeq 2×75 bp).
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bioRxiv - Microbiology 2023Quote: ... Samples were equimolarly pooled with 10% PhiX control DNA and sequenced on an Illumina MiSeq using a MiSeq 2 × 250 v2 kit (Illumina, Inc.). Due to the number of samples ...
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bioRxiv - Microbiology 2023Quote: ... Samples were pooled and sequenced on an Illumina NextSeq 500 using paired-end (2×150bp) mode (Illumina, Inc., San Diego, CA).
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bioRxiv - Microbiology 2023Quote: ... Equal amounts of PCR product (2 µl 4nM) were pooled and sequenced on an Illumina MiSeq Sequencer (Illumina, San Diego, USA) using a paired-end 300bp V3 kit at Utrecht Sequencing Facility (www.useq.nl).
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bioRxiv - Genomics 2023Quote: ... The pooled libraries were loaded into a MiSeq system and sequenced using a MiSeq reagent kit v2 with 2 × 250 cycles (Illumina, Inc.). The MiSeq reads were assembled using Newbler assembler (v2.9).
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bioRxiv - Plant Biology 2023Quote: ... libraries were prepared from 2 µg of total RNA using the TruSeq RNA Sample Prep Kit (Illumina, Cat # FC- 122-1001) and sequenced on the HiSeq 4000 to produce at least 18 million 50 bp single-end reads.
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bioRxiv - Microbiology 2023Quote: ... The 16S rRNA gene V1-V3 amplicon libraries were pooled in equimolar concentrations and paired-end sequenced (2 × 300 bp) on the Illumina MiSeq using v3 chemistry (Illumina, USA). 10 to 20% PhiX control library was added to mitigate low diversity library effects.
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bioRxiv - Genomics 2022Quote: ... and sequenced on a NextSeq 500 instrument (NextSeq 500/550 High Output Kit v2.5 (Illumina, 20024907, PE 2 x 75 cycles)) ...
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bioRxiv - Evolutionary Biology 2022Quote: ... The paired-end (2×300 bp) sequencing was then performed by Macrogen using the MiSeq™ platform (Illumina, San Diego, USA)
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bioRxiv - Genomics 2023Quote: ... one PCR-Free DNA library with 350-400 bp inserts was constructed and paired-end sequenced (2 × 150 bp) on an Illumina NovaSeq 6000 system (Illumina, USA), and two libraries with 15-20 kb inserts were prepared and sequenced on a PacBio Sequel II platform using Circular consensus sequence (CCS ...
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bioRxiv - Genomics 2023Quote: ... Urine samples were then sequenced with (either the 2 x 150 bp or 2 x 75 bp configuration) to a mean depth of 30 M reads per sample on NextSeq 2000 (Illumina Inc); sequencing length did not impact gene detection efficiency (Supplementary Fig ...
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bioRxiv - Evolutionary Biology 2023Quote: ... and paired-end sequences of 150 bp x 2 were generated using the Illumina HiSeq3000 System (Illumina, San Diego, CA, USA), targeting a yield of 2 gigabases data per sample ...
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bioRxiv - Plant Biology 2023Quote: ... Paired-end sequencing (2 × 75 bp) was performed with a NextSeq 550 System High OutPut kit (Illumina, San Diego, CA, USA). Raw reads are available at GSE227386.
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bioRxiv - Microbiology 2024Quote: ... The genomic libraries were then sequenced on a MiSeq instrument with a MiSeq Reagent Kit v2 (300 cycles; 2 x 150 bp) (Illumina Inc.).
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bioRxiv - Microbiology 2024Quote: ... (v.1.0.2) was used to check the quality of bins output by DAS Tool (HiFi and hybrid assemblies) and metabat2 (Illumina assemblies). These bins were used as input for the steps below.
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bioRxiv - Cell Biology 2024Quote: ... a minimum of 14,5 million 2×100 bp reads were generated on the Illumina NovaSeq 6000 system (Illumina Inc., CA, USA), with the NovaSeq 6000 S4 Reagent Kit (200 cycles ...
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bioRxiv - Microbiology 2024Quote: ... the gel-extracted products were pooled and prepared for sequencing via paired-end 2 × 150 bp iSeq (Illumina, San Diego, CA) sequencing in-house.
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bioRxiv - Microbiology 2024Quote: RNA from turbinate samples were sequenced in duplicate by reverse-transcription and amplification using the IDT-Swift Biosciences SARS-CoV-2 assay with v2 primers and sequenced on an Illumina NextSeq 2000 (Illumina, Inc). Reads were processed and inoculum consensus genome was generated with TAYLOR (https://github.com/greninger-lab/covid_swift_pipeline) ...
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bioRxiv - Plant Biology 2024Quote: ... Paired end read (2×150 bp) sequencing of quality libraries was performed on the NovaSeq 6000 V1.5 platform (Illumina, CA, USA). The libraries’ raw sequence read quality ...
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bioRxiv - Genomics 2024Quote: Both read 1 and read 2 files from each spatial region were mapped to the mm10 reference genome (source: Illumina igenomes) using the bowtie2 package (v2.5.1 ...
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bioRxiv - Microbiology 2024Quote: ... The cDNA libraries were constructed using the NEBNext® Ultra II Directional RNA Library Prep Kit for Illumina® and sequenced in paired-end (2×150 bp) on a NovaSeq 6000 (Illumina). After the confirmation of multiple virus infections in H ...
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bioRxiv - Microbiology 2024Quote: ... The pooled DNA library was paired end sequenced at 2×300 bp using a MiSeq Reagent Kit v3 on Illumina MiSeq platform (Illumina, CA), at Baylor University.
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bioRxiv - Molecular Biology 2024Quote: ... the pool of plasmids for each library (inputs) was amplified using primers bearing sequences from Illumina (Read 1 and Read 2) and complementary to PT1 and down to Moe (Figure 1C) ...
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bioRxiv - Genomics 2024Quote: We then pooled the original and targeted libraries at a 2:1 molar concentration and sequenced them together on a NovaSeq 6000 (Illumina, 20012850) with a S1 Reagent Kit v1.5 (200 cycles ...
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bioRxiv - Genomics 2024Quote: ... we further pooled the hybrid selection into 3 “super pools.” 2) The hybrid selected libraries were sequenced on a NovaSeq 6000 (Illumina, 20012850) with a S1 Reagent Kit v1.5 (200 cycles ...
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bioRxiv - Genetics 2024Quote: ... 1 µg of total RNA was used with the TruSeq RNA Sample Prep Kit v.2 (Illumina, San Diego, CA, USA). The cDNA libraries were quantified by quantitative Real-Time PCR (qPCR) ...
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bioRxiv - Bioengineering 2024Quote: ... and 60 ng of each were pooled into a single NGS library that was sequenced on a NextSeq 2000 using a P3 2×51 cycle paired-end run (Illumina, 20040559).
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bioRxiv - Developmental Biology 2024Quote: ... Fragments were sequenced using a 150×2 paired terminal sequencing scheme on the Illumina Novase Q6000 analyzer (Illumina HiSeq sequencing platform) to obtain the sequencing results ...
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bioRxiv - Cell Biology 2020Quote: ... as paired-end sequencing on S4 flowcell (2×150 bp reads) on Illumina NovaSeq-6000 sequencer at GR (Illumina, San Diego, CA).
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bioRxiv - Genomics 2020Quote: ... sequencing libraries of the two deeply sequenced samples were constructed with 1.8-2 μg sample DNA and the TruSeq DNA PCR-Free kit (Illumina, San Diego, CA). The remaining 74 paired-end short insert (350 nt ...
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Host transcriptomic profiling of COVID-19 patients with mild, moderate, and severe clinical outcomesbioRxiv - Genomics 2020Quote: ... as previously described.12,13,14 Libraries were then sequenced using the NovaSeq SP Reagent kit (2 × 150 cycles) from Illumina (San Diego, CA, USA) to generate a minimum of 15M reads per sample (Supplementary Table 1).
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bioRxiv - Neuroscience 2022Quote: ... The concentration was adjusted to 2 nM prior to sequencing (50 bp) on a HiSeq 2000 sequencer (Illumina, Inc., San Diego, USA) using TruSeq SR Cluster kit v3-cBot-HS (Illumina ...
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bioRxiv - Molecular Biology 2022Quote: ... using a Pipin prep (Sage Science, Beverly, MA, USA) and sequenced using S1 chemistry (paired-end, 2×50 bp sequencing) on a Novaseq sequencer (Illumina, Cambridge, UK). 2 biological replicates were analysed per condition.
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bioRxiv - Microbiology 2022Quote: ... 15 Gb output) was used according to the manufacturer’s instructions for library preparation and sequencing on a MiSeq 2 (Illumina, San Diego, USA). The quality of the obtained sequences was checked with FastQ files generated at the end of the run (MiSeq Reporter Software ...
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bioRxiv - Genomics 2020Quote: ... Samples were pooled and sequenced in a single lane on a MiSeq (2×250 bp paired-end, Illumina Inc., San Diego, CA) at the National Genomics Infrastructure ...
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bioRxiv - Genomics 2020Quote: ... Sequencing was performed by the Vienna Biocenter Core Facilities NGS on an Illumina HiSeq2500 platform (2×125bp; Illumina, San Diego, CA, USA).
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bioRxiv - Genomics 2021Quote: ... whole-genome of each strain was sequenced using Illumina NextSeq 2×150 bp after NextEra XT library preparation (Illumina, San Diego, CA) as in de Lastours et al ...
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bioRxiv - Genomics 2021Quote: ... and the other smaller cohort for replicating the effect size of methylation sex differences (AEMS450K2, Athero-Express Methylation Study Illumina 450K 2). RNA-sequencing was performed on plaques for which DNA methylation data was available (420 out of 485 plaques) ...
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bioRxiv - Microbiology 2020Quote: ... Paired-end sequencing libraries were constructed and sequenced as 2×151 bp using the Illumina NovaSeq platform (Illumina Inc, San Diego, CA).