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Citations for Illumina :
51 - 100 of 142 citations for Dnp pro leu gly cys me his ala D arg nh2 since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2024Quote: ... The production-scale sequencing of the Hi-C library was performed on a NextSeq2000 sequencer (Illumina) using 150 bp paired-end read mode at the Berlin Center for Genomics in Biodiversity Research.
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bioRxiv - Microbiology 2021Quote: ... B and D (Illumina, San Diego, CA). With a final reaction volume of 50 μL ...
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bioRxiv - Synthetic Biology 2022Quote: ... and Nextera XT index kit D (Illumina). Amplicon sizes were verified on a Tapestation using the High Sensitivity D1000 Screentape (Agilent) ...
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bioRxiv - Molecular Biology 2023Quote: ... PRO-seq libraries were provided to Vanderbilt Technologies for Advanced Genomics (VANTAGE) for sequencing (Illumina Nextseq500, SE-75).
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bioRxiv - Genomics 2021Quote: ... and (3) 134 Gb (~100× depth) chromosome conformation capture sequencing (Hi-C) data (sequenced by Illumina platform).
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bioRxiv - Genomics 2022Quote: ... Hi-C libraries were sequenced on a NextSeq 550 apparatus (2 × 75 bp, paired-end Illumina NextSeq). Contact maps were generated from reads using the hicstuff pipeline for processing generic 3C data ...
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bioRxiv - Molecular Biology 2021Quote: ... Samples were sequenced on the Illumina Hi-Seq 2500 Next-Generation-Sequencer (Illumina, San Diego, CA, USA) using 50bp single-end sequencing.
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bioRxiv - Genomics 2022Quote: ... and DpnII and HindIII Hi-C material was sequenced (2×50 nt) on a HiSeq 4000 (Illumina) following the manufacturer’s instructions) ...
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bioRxiv - Genomics 2022Quote: ... Chromosome-scale scaffolding was then performed by HiRise44 with Hi-C reads obtained from HiSeq 2500 (Illumina).
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bioRxiv - Physiology 2024Quote: ... Samples were individually barcoded sequenced on the Illumina Hi-Seq 4000 (Illumina Inc, San Diego, CA, USA). Sequencing reads were demultiplexed via Illumina’s bcl2fastq software (Illumina Inc ...
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bioRxiv - Plant Biology 2024Quote: Hi-C libraries were sequenced at the LAFUGA Gene Center Munich on a NextGen 500 instrument (Illumina) using 2 x 60 bp paired-end reads ...
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bioRxiv - Physiology 2024Quote: ... Single-end 100 bp reads were performed on an Illumina Hi-Seq (Illumina, San Diego, CA, USA). Sequencing reads were pre-processed and mapped with minor changes to established protocols ...
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bioRxiv - Molecular Biology 2021Quote: ... The index sequences were defined by the combination of primers with TruSeq HT index 1 (D 7xx) and TruSeq HT index 2 (D 5xx) (Illumina). Index PCR was performed using KAPA HiFi HS ReadyMix (Kapa Biosystems ...
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bioRxiv - Genomics 2020Quote: ... Sequencing of the Hi-C library was conducted on an Illumina HiSeq 2500 (Illumina, San Diego, CA, USA) with 101 bp paired-end reads ...
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bioRxiv - Genomics 2020Quote: ... Uniquely barcoded libraries from single-cells pooled together and sequenced using a HiSeq-Hi-output-2500 sequencer (Illumina). In total ...
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bioRxiv - Genomics 2022Quote: ... we further sequenced the same libraries on a single lane of rapid flowcell in Hi-seq 2500 (Illumina) at Otago Genomics Facility (OGF) ...
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bioRxiv - Genomics 2024Quote: ... were sequenced to a target depth of 40 million read pairs using a Hi-Seq 2500 device (Illumina).
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bioRxiv - Molecular Biology 2020Quote: The OmniATAC transposition reaction was performed with 50000 mES cells as previously described (Corces et al., 2017) using the Tagment DNA TDE1 Enzyme (Illumina, #20034197). DNA was purified using the PCR clean-up MinElute kit (Qiagen ...
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bioRxiv - Neuroscience 2020Quote: ... before single-end sequencing to generate 50 bp reads on the Hi-Seq 4000 platform (Illumina, San Diego, USA).
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bioRxiv - Genetics 2020Quote: ... The libraries were pooled and loaded at a concentration of 1.8pM with 10% PhiX spike-in for sequencing on an Illumina NextSeq 550 System using Illumina NextSeq 150 Cycle Hi-Output v2.5 kits (Illumina) to achieve a targeted read depth of ∼33,000 reads per nucleus ...
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bioRxiv - Plant Biology 2023Quote: ... The 5μg total RNA (DNase-treated) was outsourced for the RNA-Seq on Hi-Seq 2000 genome analyzer (Illumina) sequencing platform ...
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bioRxiv - Genomics 2023Quote: ... about 40 ng purified pre-amplified Hi-C sample was fragmented in two 50 μl tagmentation mix (1x TD buffer and 0.5 μl TDE1 (Illumina Tagment DNA TDE1 Enzyme and Buffer Kit ...
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bioRxiv - Genomics 2023Quote: ... and sequenced by PacBio Sequel II. Hi-C libraries were prepared following a standard protocol (Belton et al. 2012) and sequenced by Illumina HiSeq 4000 (Illumina ...
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bioRxiv - Pathology 2024Quote: ... aphidicola (C, D) based on SNPs identified from Illumina sequencing ...
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bioRxiv - Cell Biology 2020Quote: ... Samples with RNA Integrity Number (RIN) >8 were subjected TruSeq Poly-A mRNA Library Pro Kit protocol 15031047 RevD (Illumina, USA) to generate indexed cDNA libraries ...
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bioRxiv - Molecular Biology 2021Quote: ... Paired-end Illumina sequencing libraries were prepared and total RNA-seq was performed with the Hi-seq 2500 (Illumina Inc.).
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bioRxiv - Microbiology 2020Quote: A NextSeq run was completed on the pooled libraries using the NextSeq 500 hi-output v2 75-cycle kit and Buffer Cartridge (Illumina). Sequence files were downloaded from the MIP NGS server ...
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bioRxiv - Microbiology 2021Quote: ... A NextSeq run was completed on the pooled libraries using the NextSeq 500 hi-output v2 75-cycle kit and Buffer Cartridge (Illumina). Sequence files were downloaded from the NGS server ...
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bioRxiv - Plant Biology 2021Quote: ... Libraries were constructed using the Nextera DNA preparation kit and sequenced on an Illumina Hi-Seq 2500 platform (paired-end 125 bp reads) (Illumina). Quality control reports for the raw sequencing reads were generated using FastQC (Andrews ...
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bioRxiv - Neuroscience 2021Quote: ... Pooled sequencing libraries were loaded at a concentration of 1.8pM with 10% PhiX spike-in and sequenced using eight Illumina NextSeq 150 Cycle Hi-Output v2.5 kits (Illumina #20024907) on an Illumina NextSeq 550 System ...
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bioRxiv - Neuroscience 2021Quote: Sequencing of the pooled libraries was completed by the NIDDK Genomics Core on an Illumina NextSeq 550 system using a NextSeq 150 Cycle Hi-Output v2.5 kit (Illumina #20024907), generating a total of 400 million reads for an estimated sequencing depth of 40,000 reads per cell ...
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bioRxiv - Genomics 2024Quote: The chromatin conformation capture (Hi-C) fragment libraries were constructed from 300-700 bp insert size and were measured by Illumina platform for auxiliary assembly (Rao et al. ...
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bioRxiv - Developmental Biology 2023Quote: ... The samples were pooled at a concentration of 5 nM and run on an Illumina HI-SEQ 2500 sequencer (Illumina) to obtain paired-end reads of 75 bases (PE75) ...
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bioRxiv - Evolutionary Biology 2022Quote: ... The Hi-C libraries were processed to paired-end sequencing on the Illumina Hiseq 4000 (Illumina, San Diego, CA, USA) platform with read length of 150 bp.
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bioRxiv - Genetics 2022Quote: ... Variants considered causative were validated in the proband and studied in his parents by deep amplicon sequencing performed using Nextera XT Kit (Illumina) and paired-end sequencing as described above for WES.
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bioRxiv - Genetics 2023Quote: ... Samples were indexed and pairs for each experiment were pooled for sequencing using the NextSeq 500/550 Hi Output KT v2.5 (Illumina #20024907) on an Illumina NextSeq550 ...
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bioRxiv - Cell Biology 2022Quote: ... The Nextera XT Index Kit v2 Sets A-D (Illumina) barcodes were used for the amplified sequencing libraries and the quality of libraries was assessed using a Qubit fluorometer (ThermoFisher Scientific ...
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bioRxiv - Plant Biology 2021Quote: ... The chimeric fragments were isolated and then constructed to five Hi-C libraries that were sequenced on an Illumina NovaSeq platform (Illumina, USA) with 2×150 bp pair-end reads ...
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bioRxiv - Genomics 2024Quote: ... we employed PacBio HiFi sequencing, Illumina sequencing and Hi-C sequencing using the PacBio Sequel II (Pacific Biosciences, USA) and Illumina Novaseq 6000 (Illumina, USA) plat forms ...
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bioRxiv - Biochemistry 2024Quote: ... Subsequent next-generation RNA sequencing was outsourced and conducted at Kyushu Pro Search LLP (Fukuoka, Japan) using Nextseq 500 (Illumina, San Diego, CA). Lead count data were analyzed using integrated Differential Expression & Pathway Analysis 2.01 (iDEP2.01 ...
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bioRxiv - Neuroscience 2020Quote: ... Sample indexing was performed using index sets A and D (Illumina). At this point ...
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bioRxiv - Neuroscience 2020Quote: ... Samples were sequenced single-end using 50 bp reads on the HiSeq-2500 and Hi-Seq 4000 platforms (Illumina, San Diego, USA).
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bioRxiv - Genetics 2022Quote: ... Final library concentrations were diluted to 4nM and submitted for sequencing on the Illumina Hi-Seq 2500 (Illumina, San Diego, CA, USA), 125bp SE in the GSL ...
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bioRxiv - Pharmacology and Toxicology 2024Quote: ... cDNA libraries were singe-end sequenced in 76 cycles using a NSQ 500/550 Hi Output KT v2.5 (Cat #20024906 Illumina, San-Diego, CA) in one multiplex run (N=3/exposure group) ...
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bioRxiv - Developmental Biology 2024Quote: ... Both cell multiplexing oligo and gene expression libraries were generated according to 10x Genomics reccomendations and were sequenced on a Novaseq (Illumina pro-tocol #1000000106351 v03) with the cbot2 chemistry.
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bioRxiv - Cell Biology 2021Quote: ... Eluted libraries were quantified using a Qubit dsDNA HS Assay Kit and sequenced on a NextSeq 500 or Hi-Seq 4000 (Illumina, San Diego, California). A list of the RNA-Seq samples can be found in Supplementary Table 5.
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bioRxiv - Developmental Biology 2020Quote: ... The samples were pooled at a concentration of 5nM and run on an Illumina HI-SEQ 2500 sequencer (Illumina, Inc. San Diego, CA) to obtain paired-end reads of 75 bases (PE75) ...
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bioRxiv - Genomics 2024Quote: ... Hi-C libraries for scaffolding were generated and sequenced by Arima Genomics (200.48 million PE 150-bp reads; Illumina NovaSeq; Arima Genomics, USA). To aid gene annotation ...
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bioRxiv - Cell Biology 2023Quote: ... were used instead of the primers that came with the SMARTer Stranded Total RNA HI Mammalian kit to allow for sequencing on the NovaSeq (Illumina, San Diego, CA) by the Biopolymers Facility at Harvard Medical School.
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bioRxiv - Evolutionary Biology 2023Quote: ... multiplexed and sequenced as 150 bp paired-end reads using two lanes on an Illumina Hi-Seq 2000 (Illumina, San Diego, CA, USA) through Novogene (Beijing ...