Labshake search
Citations for Illumina :
51 - 100 of 1943 citations for 1 Hydroxymethyl benzo cd indol 2 1H one since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Genomics 2024Quote: ... The libraries were prepared with Ampliseq Library Plus for Illumina kit (Illumina, San Diego, CA, USA and using Illumina’s Ampliseq CD indexes set A(Illumina), and their quality was assessed with High Sensitivity DNA reagents on an Agilent 2100 Bioanalyzer System ...
-
bioRxiv - Microbiology 2022Quote: ... Australia on one MiSeq V3 system (Illumina) with 2×300bp paired-end reads.
-
bioRxiv - Microbiology 2023Quote: ... Australia on one MiSeq V3 system (Illumina) with 2×300bp paired-end reads.
-
bioRxiv - Genomics 2021Quote: ... We used one of the cohorts for our main analyses (AEMS450K1, Athero-Express Methylation Study Illumina 450K 1) and the other smaller cohort for replicating the effect size of methylation sex differences (AEMS450K2 ...
-
bioRxiv - Microbiology 2020Quote: ... Illumina sequencing libraries were prepared using Nextera DNA Flex Library Prep Kit and Nextera DNA CD Indexes (Illumina, https://www.illumina.com) according to manufacturer’s instructions ...
-
Engineering TALE-linked deaminases to facilitate precision adenine base editing in mitochondrial DNAbioRxiv - Molecular Biology 2023Quote: ... we utilized an Illumina DNA Prep kit with Nextera DNA CD Indexes to create an NGS library from the purified PCR products (Illumina). The libraries were then pooled and transferred onto a MiniSeq sequencer (Illumina).
-
bioRxiv - Molecular Biology 2024Quote: ... 15 µL of cleaned-up PCR product from the first PCR and 10 µL Nextera DNA CD Indexes (96-well format from Illumina) for dual indexing ...
-
bioRxiv - Cancer Biology 2020Quote: ... The libraries were quantitated by qPCR and sequenced on one lane for 101 cycles from one end of the fragments on a NovaSeq 6000 (Illumina) using a NovaSeq SP reagent kit and yielded 400 to 500 million single reads per lane ...
-
bioRxiv - Neuroscience 2023Quote: ... Libraries were pooled and quantified using qPCR and were then sequenced on one S Prime (SP) lane for 101 cycles from one end of the fragments on a NovaSeq 6000 (Illumina). FASTQ files were generated from the raw sequencing runs and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina) ...
-
bioRxiv - Genomics 2020Quote: ... two NextSeq and one NovaSeq instrument (all Illumina).
-
bioRxiv - Genomics 2020Quote: ... sequenced on one lane of HiSeq X (Illumina). One of the DNA preps inferred to have HMW DNA was used to prepare a linked reads Chromium library (10x genomics ...
-
bioRxiv - Genetics 2022Quote: ... samples were sequenced on one NovaSeq 6000 (Illumina) S4 PE150 flowcell ...
-
bioRxiv - Genomics 2020Quote: ... the fragmented amplicons were cleaned-up and amplified by 5 cycles of PCR using specific index adapters for Illumina sequencing (Nextera™ DNA CD Indexes, Illumina) (Supplementary Figure 1B) ...
-
bioRxiv - Microbiology 2023Quote: ... 200ng of gDNA was used to prepare sequencing libraries using the Illumina DNA Prep kit with Nextera™ DNA CD Indexes (Illumina). Samples were multiplexed and sequenced on an Illumina MiSeq using the MiSeq Reagent Kit V3 600 (Illumina ...
-
bioRxiv - Genomics 2024Quote: ... Sequencing libraries were prepared using the Nextera DNA Flex Library Prep and the Nextera DNA CD Indexes (Illumina, San Diego, USA). Quality of libraries were assessed using the Tape Station (Agilent Technologies ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... Genomic DNA libraries were constructed from 200 ng of each DNA extract using NexteraTM DNA Flex library prep kits and NexteraTM DNA CD Indexes (Illumina, Singapore) for 130 DNA samples ...
-
bioRxiv - Bioengineering 2023Quote: ... 10x libraries were pooled and charged with 1% PhiX on one SP lane of the NovaSeq 6000 instrument (Illumina) using the NovaSeq 6000 SP Reagent Kit v1.5 Raw sequencing data of the modules viability study were processed with Cellranger80 ...
-
bioRxiv - Physiology 2024Quote: ... 10x libraries were pooled and charged with 1% PhiX on one S1 lane of the NovaSeq 6000 instrument (Illumina) using the NovaSeq 6000 S1 Reagent Kit v1.5 (100 cycles) ...
-
bioRxiv - Synthetic Biology 2023Quote: ... The Illumina DNA libraries were prepared using the Illumina DNA Prep kit (USA) and the Nextera™ DNA CD Indexes (Illumina, USA). The average length of the DNA libraries was evaluated using Agilent Bioanalyzer 2100 and a High Sensitivity Kit (Agilent Technologies ...
-
bioRxiv - Microbiology 2023Quote: ... IDT for Illumina DNA/RNA UD indexes and Nextera DNA CD indexes were used (Illumina IDT, Cat. 20027213; Illumina Nextera, Cat. 20018708).
-
bioRxiv - Genomics 2022Quote: ... then single-end sequenced (1 x 100 bp) on one lane using TrueSeq PE150 kit (Illumina, Inc., San Diego, CA) on an Illumina HiSeq 2000 instrument ...
-
bioRxiv - Developmental Biology 2022Quote: All libraries were sequenced on one NovaSeq platform (Illumina). Base calls ...
-
bioRxiv - Cancer Biology 2022Quote: ... The cell pellet was then mixed and incubated at 37°C for 1h min with the transposition reaction mix prepared using Illumina Tagment DNA Enzyme and Buffer kits (Illumina, 20034197). DNA was then purified using DNA Clean and Concentrator kit (Zymo ...
-
bioRxiv - Cancer Biology 2020Quote: ... and one sample of each clonal population) were multiplexed into one pool and sequenced on Illumina HiSeq2000 instrument (Illumina Inc., San Diego, CA). Adapter sequence was trimmed using Trimmomatic-0.30 ...
-
bioRxiv - Genomics 2021Quote: ... Lab 1 and 2 sequenced DNA with a NovaSeq 6000 (Illumina,
-
bioRxiv - Systems Biology 2023Quote: ... The libraries were quantitated by qPCR and sequenced on one lane for 101 cycles from one end of the fragments on a HiSeq 4000 (Illumina, San Diego, CA, USA). Fastq files with 100 bp reads were generated and demultiplexed with the bcl2fastq v2.17.1.14 Conversion Software (Illumina ...
-
bioRxiv - Molecular Biology 2020Quote: Ribosomal RNA (rRNA) was depleted using one Ribozero (Illumina MRZH11124) reaction per 20ug of chromatin-associated RNA following the manufacturer’s protocol.
-
bioRxiv - Genomics 2020Quote: ... One hundred nucleotides were sequenced using the HiSeq platform (Illumina) from both ends of each cDNA and sequence reads were aligned against the Saccharomyces cerevisiae S288c reference genome using Tophat2 aligner (Kim et al ...
-
bioRxiv - Cell Biology 2020Quote: ... and loaded on one lane of a flow cell (Illumina). Libraries were sequenced on a HiSeq 4000 platform (Illumina ...
-
bioRxiv - Cell Biology 2022Quote: ... Each library was sequenced in one lane of HiSeq4000 (Illumina) following the manufacturer’s sequencing specification (10X Genomics).
-
bioRxiv - Cell Biology 2022Quote: ... One hundred nucleotides were sequenced using the HiSeq platform (Illumina) from both ends of each cDNA ...
-
bioRxiv - Molecular Biology 2023Quote: ... and sequenced on one lane of a NovaSeq 6000 (Illumina) machine.
-
bioRxiv - Immunology 2024Quote: ... Each library was sequenced in one lane of HiSeq4000 (Illumina) following the manufacturer’s sequencing specification (10X Genomics).
-
Discovery of malathion resistance QTL in Drosophila melanogaster using a bulked phenotyping approachbioRxiv - Genetics 2022Quote: ... we used 400-ng of each DNA sample to construct indexed sequencing libraries (Illumina DNA Prep Tagmentation, 20018705; Illumina Nextera DNA CD Indexes, 20018708). Libraries were mixed by replicate into two 4-plexes ...
-
bioRxiv - Cell Biology 2024Quote: ... were pooled at a 1:1:1:etc ratio before sequencing on an Illumina NextSeq 500/550 instrument using a version 2 kit (Illumina). Fastq files were generated for each library in Illumina BaseSpace ...
-
bioRxiv - Cancer Biology 2020Quote: ... with MiSeq Reagent Kit V3 (150 cycle) (Illumina, MS-1-2-3001). The sequencing data was de-multiplexed and trimmed to contain only the sgRNA sequence cassettes ...
-
bioRxiv - Genomics 2024Quote: ... The libraries were prepared with Ampliseq Library Plus for Illumina kit (Illumina, San Diego, CA, USA and using Illumina’s Ampliseq CD indexes set A(Illumina), and their quality was assessed with High Sensitivity DNA reagents on an Agilent 2100 Bioanalyzer System ...
-
bioRxiv - Genomics 2020Quote: ... where one set of replicates was prepared and sequenced by Illumina on a NovaSeq 6000 ...
-
bioRxiv - Bioengineering 2021Quote: ... Sequencing was performed in one lane of the NovaSeq SP (Illumina) using the 2 x 150 bp paired-end protocol.
-
bioRxiv - Microbiology 2020Quote: ... and one of a set of reverse oligonucleotides containing Nextera (Illumina) indices (JW8054 ...
-
bioRxiv - Genomics 2023Quote: ... All libraries were pooled and subjected to paired-end 75 bp sequencing (paired- end 76 nt reads with the first 1 nt of Read 1 and the last 1 nt of Read 2 trimmed) using the NextSeq500 system (Illumina, CA, USA). For each library ...
-
bioRxiv - Genomics 2021Quote: ... Each batch was sequenced separately on 1-flowcell (2 lanes) HiSeq 2500 (Illumina) Rapid Mode platform with a single-end (1×50 bp ...
-
bioRxiv - Microbiology 2020Quote: ... Read 1 and 2 adapter recognition sequences were provided for adapter removal (Illumina TruSeq Adapter Read 1 ...
-
bioRxiv - Microbiology 2023Quote: ... gRNA abundances (read 1) and UMI barcodes (read 2) were quantified by Illumina sequencing and subsequently processed by the analysis described below.
-
bioRxiv - Cancer Biology 2023Quote: ... and were sequenced on one lane of NovaSeq6000 SP PE150 (Illumina, 20028400) at UCSF Center for Advanced Technology (CAT).
-
bioRxiv - Immunology 2024Quote: ... and pooled for sequencing in NovaSeq 6000 (one lane, S4, PE151, Illumina). The libraries underwent 3 × 13–25 cycles of amplification ...
-
bioRxiv - Cell Biology 2021Quote: ... using NextSeq 500 (2×75 bp) and HiSeq 4000 (1×50 bp) equipment (Illumina).
-
bioRxiv - Microbiology 2023Quote: ... 2 × 1 μl (concentration of 10pmol/μl) MiSeq Nextera XT adapters (dual indexed, Illumina), and 6.5 μl of mQ water (Ultrapure) ...
-
bioRxiv - Microbiology 2020Quote: ... Read 1 and 2 adapter recognition sequences were provided for adapter removal (Illumina TruSeq Adapter Read 1: AGATCGGAAGAGCACACGTCTGAACTCCAGTCACNNNNNNATCTCGTATGCCGTCTTCTGCT TG, Illumina TruSeq Adapter Read 2 ...
-
bioRxiv - Microbiology 2021Quote: ... The purified PCR products were then processed and sequenced using the NextSeq 75 – High Output (82 cycles in read 1, 8 cycles in index 1, and 8 cycles in index 2 SE reads) (Illumina). The sequencing data was analyzed using the Model-Based Analysis of Genome-wide CRISPR/Cas9 Knockout (MAGeCK ...