Labshake search
Citations for Illumina :
9251 - 9300 of 9536 citations for Mouse Stress Induced Phosphoprotein 1 STIP1 ELISA Kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Biochemistry 2020Quote: ... we reduced the false-positive reads introduced by library generation and sequencing steps (Illumina reported at 1%). We detected and discarded on average 5% of reads due to false-positive mutations ...
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bioRxiv - Microbiology 2022Quote: ... diluted at a ratio of 1:2 and amplified following the Nextera XT Index protocol (Illumina, Inc.). The amplicons were normalized using a SequalPrep™ Normalization Plate Kit (Thermo Fisher Scientific Inc. ...
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bioRxiv - Genomics 2022Quote: ... We partitioned the genes into three categories: (1) >5-fold higher in Illumina (“Higher count in Illumina”); (2 ...
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bioRxiv - Genomics 2021Quote: ... The libraries were PE150 sequenced on either HiSeqX (Liver nuclei batch 1) or a NovaSeq 6000 (Illumina). scnmC-Seq2 libraries were prepared according to the previously published protocol (Luo et al. ...
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bioRxiv - Developmental Biology 2021Quote: ... 1 ng of pre-amplified cDNA from an estimated 600 cells was tagmented by Nextera XT (Illumina) with a custom P5 primer (Integrated DNA Technologies) ...
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bioRxiv - Cancer Biology 2019Quote: ... Pooled and diluted library were denatured along with 1% PhiX spike in as per recommendation from Illumina. Library was loaded onto the NextSeq 550 v2 mid-output 150 cycle kit.
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Autocrine Sfrp1 inhibits lung fibroblast invasion during transition to injury induced myofibroblastsbioRxiv - Cell Biology 2022Quote: ... 1 ng of pre-amplified cDNA from an estimated 1000 cells was tagmented by Nextera XT (Illumina) with a custom P5-primer (Integrated DNA Technologies) ...
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bioRxiv - Immunology 2024Quote: ... Beads were resuspended in 29 µL pre-warmed tagmentation buffer with 1 µL Tn5 transpose (Illumina, 20034197). Samples were incubated for 5 minutes with vigorous mixing at 1100 rpm at 37°C in a thermomixer ...
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bioRxiv - Microbiology 2024Quote: ... sequencing libraries were prepared from 1 µg of gDNA using the Illumina TruSeq DNA PCR free (Illumina) library preparation kit according to the manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2024Quote: ... DNA eluted and purified was sequenced (sequencing single-reads, 1 × 50 bp or paired-end 100bp; Illumina) of the resulting input and IP samples performed by BGI ...
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bioRxiv - Neuroscience 2023Quote: ... Single read (1×75bp) sequencing was performed on the NextSeq 550 platform (Illumina Inc, SY-415-1002) using the NextSeq 500/550 High-Output v2.5 kit (20024906) ...
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bioRxiv - Cancer Biology 2023Quote: ... The quantified library pool was diluted to 1 nM and sequenced on MiniSeq (Illumina, FC-420-1001) to check for the quality of reads ...
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bioRxiv - Cancer Biology 2023Quote: ... Fixed cells were transposed using barcoded Tn5 (Seqwell) in a transposition buffer (1 × TD buffer from Illumina Nextera kit ...
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bioRxiv - Biochemistry 2023Quote: ... and the indexed libraries were prepared from 1 μg of purified RNA with TruSeq-stranded mRNA (Illumina) Library Prep Kit according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2023Quote: ... The libraries were then subjected to 1×75bp high-throughput sequencing using a NextSeq 500 instrument (Illumina). Reads were mapped to the Arabidopsis TAIR10 reference genome using STAR version 2.7.2b (32) ...
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bioRxiv - Evolutionary Biology 2020Quote: ... and a total of 4 μg of total RNA was used to construct paired-end libraries using the TruSeq RNA Sample Preparation Kit v3 (Illumina, Inc., San Diego, CA, USA) according to the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2021Quote: ... This work benefited from the facilities and expertise of the I2BC High-throughput Sequencing Platform (Gif-sur-Yvette, Université Paris-Saclay, France) for oriented library preparation (Illumina Truseq RNA Sample Preparation Kit) and sequencing (Paired-end 75 bp ...
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bioRxiv - Molecular Biology 2021Quote: ... Library preparation was as previously described and library sequencing performed using the Illumina MiSeq platform with the 2 × 300v3 Reagent Kit (Illumina Inc., San Diego, CA, USA) (Avramenko et al. ...
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bioRxiv - Molecular Biology 2020Quote: ... library preparation and sequencing: Synthesis of cDNA was performed using NEBNext Ultra Directional RNA Library Prep Kit from Illumina (New England Biolabs; cat. no. E7420) according to the manufacturer’s instruction ...
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bioRxiv - Genomics 2020Quote: ... After A-tailing and adaptor ligation fragments that carry adaptors on both ends were enriched by 8 cycles of PCR (Illumina TruSeq Nano DNA Sample Kit). The final library was quantified using PicoGreen (Quant-iT ...
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bioRxiv - Microbiology 2020Quote: ... A paired-end sequencing library (2×250bp) was created using a VAHTS Universal DNA Library Prep kit for Illumina® (Illumina, San Diego, CA, USA) and sequenced within an Illumina HiSeq system (Illumina Inc.).
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bioRxiv - Immunology 2021Quote: ... Libraries were prepared following 10X Genomics protocols (Chromium Single Cell 3’ Reagent Kits v2 Chemistry) and sequenced on NovaSeq 6000 (Illumina S2 flow cell, paired-end). FASTQ files were processed using cellranger (https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger ...
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bioRxiv - Microbiology 2019Quote: ... A library was prepared by adaptor ligation with the PCR primer pairs using the TruSeq Nano DNA Library Prep Kit (Illumina, Inc., San Diego, CA, USA). When two or more bands were detected using 1.5%-agarose gel electrophoresis ...
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bioRxiv - Microbiology 2019Quote: ... pooled and sequenced with 75 basepair single reads to a depth ranging from 13 to 55 million reads per sample on a Illumina NextSeq 500 using a High Output 75 cycles kit (Illumina, catalog number: FC-404-2005).
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bioRxiv - Microbiology 2019Quote: The pooled up RNA species were selectively converted into a library of template molecules using TruSeq Stranded mRNA and Total RNA kit (Illumina Inc., San Diego, CA, USA). Depletion of rRNAs was carried out using the Ribo-Zero Gold system (Illumina Inc.) ...
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bioRxiv - Developmental Biology 2019Quote: ... RNA fragments were reverse-transcribed to create the final cDNA libraries following the NEBNext® Ultra™ RNA Library Prep Kit (Illumina, San Diego, USA), paired-end sequencing was performed.
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bioRxiv - Genomics 2019Quote: ... Sequencing was performed on the Illumina HiSeq 2000 using paired end mode with 101 cycles using standard Illumina protocols and the 200 cycle TruSeq SBS Kit v3 (Illumina Inc., San Diego, CA, USA).
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bioRxiv - Zoology 2019Quote: ... Library preparation was as previously described and library sequencing performed using the Illumina MiSeq platform with the 2×250 v2 Reagent Kit (Illumina Inc., San Diego, CA, USA) (Avramenko et al. ...
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bioRxiv - Genomics 2019Quote: ... We constructed a genomic DNA library using a modified version of the Nextera DNA Library Prep kit (#FC-121-1031, Illumina, Inc., San Diego, CA, USA) meant to conserve reagents [71] ...
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bioRxiv - Genomics 2019Quote: ... The experimental protocol to construct stranded mRNA RNASeq libraries starting from the total RNA employed the TruSeq®Stranded mRNA LT Sample Prep Kit (Illumina Inc., Rev.E, October 2013). The initial input was 0.5 ug of total RNA for each sample ...
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bioRxiv - Evolutionary Biology 2021Quote: ... Approximately 5 ug of total RNAs were used to construct cDNA libraries (NEBNext Ultra Directional RNA Library Prep Kit for Illumina, Illumina, San Diego, CA, USA). Transcriptome sequencing was performed using the Illumina Hi-Seq 2000 platform ...
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bioRxiv - Genomics 2020Quote: ... transcripts were purified from total RNA using oligo(dT) magnetic beads and mRNA sequencing libraries were prepared with the TruSeq Stranded mRNA Library Preparation Kit (Illumina, RS-122-2101, RS122-2102). A D1000 Screen Tape assay (Agilent ...
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bioRxiv - Evolutionary Biology 2020Quote: ... We prepared a genomic DNA library of these 343 DNA samples using a modified version of the Nextera DNA library prep kit (∼ 350bp insert size, Illumina Inc., San Diego, CA, USA) meant to conserve reagents ...
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bioRxiv - Cancer Biology 2020Quote: ... A sequencing library was constructed using 100 ng of total RNA and a TruSeq RNA Access Library Prep Kit (Illumina, Inc., San Diego, CA, USA), according to the manufacturer’s protocols ...
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bioRxiv - Immunology 2020Quote: ... before fragmenting the samples to 450bp fragments and processing with the Illumina TruSeq DNA PCR-Free Sample Preparation kit (Illumina Inc., San Diego, CA, USA). Over the three-year duration of the sequencing phase of the project ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Total RNA was extracted from the discs and libraries for Illumina HiSeq2000 sequencing were generated using the TruSeq RNA Sample Preparation Kit (Illumina, catalog ID RS-122-2002). Reads were mapped using Bowtie2 v ...
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bioRxiv - Cell Biology 2021Quote: ... transcripts were purified from total RNA using oligo(dT) magnetic beads and mRNA sequencing libraries were prepared with the TruSeq Stranded mRNA Library Preparation Kit (Illumina, RS-122-2101, RS122-2102) (9).
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bioRxiv - Microbiology 2021Quote: ... Total RNA of the paddy soils was subjected to an rRNA removal procedure using the Ribo-Zero rRNA removal bacteria kit (Illumina Inc., San Diego, CA, USA) following the manufacturer’s protocol.
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bioRxiv - Cell Biology 2021Quote: Total RNA purified from hippocampi of WT and Atf6b−/− mice (n=2 per group) was used to prepare RNA libraries using a TruSeq Stranded mRNA Sample Preparation Kit (Illumina, Inc., San Diego, CA, USA), with polyA selection for ribosomal RNA depletion ...
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bioRxiv - Cancer Biology 2020Quote: ... The 3-cell control sample was sequenced on an Illumina MiSeq using a v2 300-cycle kit in 2×150 bp paired-end mode (Illumina, cat. no. MS-102-2002). For the patient samples ...
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bioRxiv - Genetics 2022Quote: ... then pooled them and sequenced the 2×75 bp paired-end libraries on one Flowcell of an Illumina NextSeq 550 with a High Output v2 kit (150 cycles) (Illumina Inc., San Diego, California, USA).
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bioRxiv - Microbiology 2022Quote: ... 5 ng of total RNA was used for intact RNA library preparation (NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (NEB #E7760, New England BioLabs). To obtain sufficient RNA for the analysis of oral samples ...
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bioRxiv - Neuroscience 2022Quote: Total RNAs from cultured mouse WT and CD38 KO astrocytes at 5 DIV were used for RNA library preparation using TruSeq Stranded mRNA Sample Preparation Kit (Illumina, Inc., San Diego, CA, USA), with polyA selection for ribosomal RNA depletion.
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bioRxiv - Immunology 2022Quote: ... Libraries were pooled to 10 nM and sequenced three times on the Illumina MiSeq platform using the 600-cycle MiSeq Reagent Kit v3 (2x300 bp, paired-end; Illumina, Cat. No. MS-102-3003); per sample read depth is provided in Table 1.
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bioRxiv - Molecular Biology 2020Quote: ... the purified sample was used as the template for barcoding with Nextera XT Index Kit v2 (FC-131-1002 - Illumina Inc, San Diego, CA, USA). The finished libraries were normalized to 4 nM and pooled ...
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bioRxiv - Plant Biology 2021Quote: ... were randomly pooled (4 samples per pool) and grouped using the TruSeq Paired-End Reads Cluster Kit on the cBot platform (Illumina Inc., San Diego, CA, USA). The cDNA libraries were posteriorly sequenced on the Illumina Genome platform Analyzer IIx with a TruSeq kit with 36 cycles (Illumina ...
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bioRxiv - Molecular Biology 2022Quote: ... Bulk and STORM-seq K562 libraries were pooled and 2×50 bp sequencing was performed on an Illumina NovaSeq 6000 sequencer using a 100 bp S2 sequencing kit (Illumina Inc., San Diego, CA, USA). The HEK293T ...
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bioRxiv - Cancer Biology 2019Quote: All libraries were sequenced using the Illumina HiSeq 2000/2500 system with TruSeq SBS Kit v3 - HS (200-cycles) reagents (Illumina, Part no. FC-401-3001), to generate paired-end 101 bp reads.
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bioRxiv - Cancer Biology 2019Quote: Whole-genome libraries were generated using either the Illumina TruSeq DNA LT sample preparation kit (Illumina, Part no. FC-121–2001 and FC-121–2001) or the Illumina TruSeq DNA PCR-free LT sample preparation kit (Illumina ...
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bioRxiv - Pharmacology and Toxicology 2021Quote: ... The pooled TempO-Seq® library was sequenced in-house using the NextSeq® 500/550 High Output Kits v2 (75 cycles) on an Illumina NextSeq 500 High-Throughput Sequencing System (Illumina, San Diego, CA, USA). A median read depth of 2 million reads/sample was achieved.