Labshake search
Citations for Illumina :
751 - 800 of 1263 citations for 2 Pyridinesulfonic acid methyl ester since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2023Quote: ... and sequencing was carried out with a NovaSeq 6000 SP 2×100bp FlowCell plus PhiX spike-in (Illumina, US), outputting ∼25M read pairs/sample ...
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bioRxiv - Molecular Biology 2023Quote: ... Ligated fragments were amplified using the Phusion enzyme Library pools were sequenced on the HiSeq 2000 (2×75bp) (Illumina) at the CNAG ...
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bioRxiv - Immunology 2024Quote: ... The sequencing run was performed using Illumina NovaSeq 6000 SP v1.5 (650-800 M reads/run, 2 lanes; Illumina) in the Finnish Functional Genome Centre (Turku Bioscience Center ...
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bioRxiv - Microbiology 2024Quote: ... 2 µl of isolated genomic DNA sample and 100 nmol of each primer (WISH_Illumina_fwd and WISH_Illumina_rev, see Table S11) were used in a DreamTaq MasterMix (Thermo Fisher Scientific) ...
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bioRxiv - Molecular Biology 2024Quote: ... The final DNA library was subjected to paired-end sequencing (2×100bp) either on NovaSeq (Illumina, San Diego, CA), for metagenomics ...
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bioRxiv - Microbiology 2024Quote: ... 2 µl of isolated genomic DNA sample and 100 nmol of each primer (WISH_Illumina_fwd and WISH_Illumina_rev, see Table S6) were used in a DreamTaq MasterMix (Thermo Fisher Scientific) ...
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bioRxiv - Microbiology 2024Quote: ... All sequencing was done using 2 x 150bp using Illumina HiSeq 4000 Instrument (Illumina Inc., San Diego, CA, USA).
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bioRxiv - Immunology 2024Quote: ... quantitated by qPCR and sequenced on 2 10B lanes with 28 x 150 nucleotide reads on a NovaSeq X Plus with V1.0 sequencing kits (Illumina). The samples each yielded 350-450 million paired reads.
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bioRxiv - Microbiology 2024Quote: ... The amplicon libraries were paired-end sequenced (2 × 300 bp) on the Illumina MiSeq using v3 chemistry (Illumina, USA). 10 to 20% PhiX control library was added to mitigate low diversity library effects.
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bioRxiv - Cancer Biology 2024Quote: ... sample libraries were sequenced to a target coverage of 0.5x using paired-end 2×100bp reads on a NovaSeq 6000 (Illumina). Sequencing libraries were deconvoluted using bcl2fastq ...
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bioRxiv - Microbiology 2024Quote: ... sequenced (251bp x 2) using the MiSeq benchtop sequencer and a 500 cycle V2 reagent kit (Illumina Inc., USA).
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bioRxiv - Developmental Biology 2024Quote: ... Libraries were generated from day 2 RNA using the TruSeq RNA Library Prep Kit v2 (Illumina RS-122-2001) and day 3 RNA using the TruSeq Stranded mRNA Library Prep Kit (Illumina 20020594 ...
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bioRxiv - Immunology 2024Quote: ... on a NextSeq 500 using the NextSeq 500/550 High Output Kit V.2 according to the manufacturer’s instructions (Illumina). For each sample ...
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were clustered and sequenced at 2×150 bp on a NovaSeq 6000 System using the NovaSeq 6000 S4 Reagent Kit v1.5 (300 cycles; Illumina).
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were clustered and sequenced at 2×150 bp on a NovaSeq 6000 System using the NovaSeq 6000 S4 Reagent Kit v1.5 (300 cycles; Illumina).
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were clustered and sequenced at 2×150 bp on a NovaSeq 6000 System using the NovaSeq 6000 S4 Reagent Kit v1.5 (300 cycles; Illumina).
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were clustered and sequenced at 2×150 bp on a NovaSeq 6000 System using the NovaSeq 6000 S4 Reagent Kit v1.5 (300 cycles; Illumina).
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bioRxiv - Cell Biology 2024Quote: ... After 2-3 passages in complete DMEM with 10% FBS gDNA was extracted to confirm the genotype by Illumina amplicon sequencing and live cell microscopy was performed.
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bioRxiv - Immunology 2021Quote: The purified amplicons were constructed into PE 2*300 libraries according to the Illumina MiSeq platform (Illumina, San Diego, USA) standard operating protocols ...
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bioRxiv - Microbiology 2021Quote: ... All samples were pooled at an equimolar concentration for paired end 2 × 300 bp sequencing via the MiSeq system (Illumina) using the MiSeq Reagent Kit v3 (600 cycles) ...
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bioRxiv - Genetics 2021Quote: ... Libraries were sequenced by NextSeq 550 High Output with 21 bp for read 1 and 72 bp for read 2 (Illumina). Sequenced reads were aligned using STAR (v2.7.6a ...
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bioRxiv - Microbiology 2020Quote: ... pooled with 1% denatured PhiX DNA (sequencing control) and sequenced in a MiSeq platform (2× 251 cycles paired-end run; Illumina). New PCR reactions using combinations of the primers described above were carried out to cover regions with low coverage for each sample ...
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bioRxiv - Genomics 2020Quote: ... Poly-A-enriched RNA was used to prepare libraries with TruSeq RNA Sample Preparation kit v2 y v4 (ref. RS-122-2001/2, Illumina) according to instructions from manufacturer followed by single-end (run1 ...
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bioRxiv - Developmental Biology 2021Quote: ... Long mRNA libraries (2 replicates per time-point) were built using the TruSeq Stranded mRNA HT Sample Prep Kit (Illumina). Library concentration was assessed for all libraries using the Qubit fluorimetric system (Invitrogen ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Libraries were pooled in equimolar ratios and sequenced in a single lane of 2 x150 paired-end sequencing on an Illumina NovaSeq 6000 (Illumina).
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bioRxiv - Evolutionary Biology 2021Quote: ... Samples were sequenced on an Illumina HiSeq 4000 producing 2×150 bp paired-end reads (Illumina, San Diego, CA, USA) at Novogene (Sacramento ...
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bioRxiv - Genomics 2020Quote: ... Paired-end read sequencing (2×150 bp) was performed on the Illumina HiSeq X (Illumina, Inc., San Diego, CA, USA) using the Chromium library.
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bioRxiv - Bioengineering 2020Quote: ... The barcoded amplicon samples were then sent to the UCLA Technology Center for Genomics & Bioinformatics for multiplex sequencing with 2 x 300 paired-end configuration in a single-lane flow cell of MiSeq instrument (Illumina). Fastq paired-end raw data were filtered ...
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bioRxiv - Genomics 2021Quote: ... Paired-end sequencing was completed using NextSeq 500/550 300-cycle High-Output Kits v 2.5 (Illumina; 2 × 150 cycles). High-Output kit used for the generation of the NextSeq data allows for over 25 times more sequence data to be generated compared to MiSeq v2 sequencing (800M versus 30M paired reads ...
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bioRxiv - Systems Biology 2020Quote: ... then performed paired-end sequencing of these libraries (38 cycles read 1 + 37 cycles read 2) on a NextSeq 500 (Illumina). After sequencing ...
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bioRxiv - Genomics 2020Quote: PDT and ATAC libraries were pooled and paired-end sequenced (2 x 34 cycles) using Nextseq High Output Cartridge kits on a Nextseq 550 machine (Illumina). Raw sequencing data were demultiplexed with CellRanger-ATAC mkfastq ...
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bioRxiv - Genomics 2021Quote: ... ChIP-seq libraries were prepared using the ThruPLEX DNA-seq Kit (Rubicon) and sequenced paired-end 2 x 100bp on the HiSeq 2500 (Illumina).
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bioRxiv - Microbiology 2021Quote: ... Libraries were sequenced using 2 x 150 nt paired-end sequencing runs (4 lanes on separate runs) on NextSeq Genome Sequencer (Illumina) with a NextSeq 500/550 High Output Kit v2.5 at Core Facility for Scientific Research – University of Sao Paulo (CEFAP-USP).
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bioRxiv - Cancer Biology 2021Quote: ... 10 cycles per index and 120 cycles for read 2 on a NextSeq 500/550 High Output Kit v2.5 (Illumina, 20024907).
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bioRxiv - Systems Biology 2021Quote: ... NGS was performed on a final adjusted library pool using the paired-end 300-cycle NovaSeq 6000 S2 XP Reagent Kit (2 × 150 bp) on a NovaSeq instrument (both Illumina) per the manufacturer’s instructions ...
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bioRxiv - Systems Biology 2021Quote: ... Concentration of each sample in the pooled libraries were determined using the paired-end 300-cycle MiSeq Reagent Nano Kit v2 (2 × 150 bp) on a MiSeq instrument (both Illumina). NGS was performed on a final adjusted library pool using the paired-end 300-cycle NovaSeq 6000 S2 XP Reagent Kit (2 × 150 bp ...
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bioRxiv - Cell Biology 2021Quote: ... was performed by incubating beads with tagmentation buffer (12.5 µl 2 x TD buffer, 11.5 µl nuclease free water, 1µl Tn5 enzyme (Illumina #FC-131-1024)) at 37°C for 10min ...
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bioRxiv - Cell Biology 2021Quote: ... Libraries were prepared by Poly A selection from total RNA and sequenced using HiSeq 2 x 150 bp sequencing (Illumina). FASTQ files from Genewiz were used for further analysis analyses were performed using the statistical computing environment R (v4.0.0) ...
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bioRxiv - Cell Biology 2021Quote: ... 8 bases for index 1 and 8 bases for index 2) using the NextSeq 500 High Output Kit 75-cycles (#FC-404-1005, Illumina) loaded at 1.8pM and including 1 % PhiX ...
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bioRxiv - Microbiology 2020Quote: ... The libraries were sequenced on the MiSeq™ platform using the MiSeq™ Reagent Kit v3 (2 × 250 bp; Illumina).
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bioRxiv - Systems Biology 2021Quote: ... and 2 × 100 base paired-end sequencing libraries were sequenced using the Illumina HiSeq 2500 with v3 sequencing reagents (Illumina).
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bioRxiv - Plant Biology 2021Quote: ... The final library was diluted to a loading concentration of 1.4 pM for cluster generation and 2 × 150 bp paired-end sequencing on the Illumina NextSeq500 system (Illumina Inc) alongside a 5% PhiX spike-in control library ...
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bioRxiv - Microbiology 2020Quote: ... Read 1 and 2 adapter recognition sequences were provided for adapter removal (Illumina TruSeq Adapter Read 1: AGATCGGAAGAGCACACGTCTGAACTCCAGTCACNNNNNNATCTCGTATGCCGTCTTCTGCT TG, Illumina TruSeq Adapter Read 2 ...
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bioRxiv - Microbiology 2020Quote: ... The PCR product mixture was sent to FASMAC to acquire 2 × 250 bp paired-end sequences using the MiSeq platform (Illumina).
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bioRxiv - Genomics 2021Quote: ... quantified by Qubit and analyzed for fragment distribution with a Bioanalyzer and used for paired-end sequencing (2 x 75 cycles) on a MiSeq System (Illumina).
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bioRxiv - Genomics 2021Quote: ... analyzed for fragment distribution with a Bioanalyzer and sequenced with paired-end settings (2 x 75 cycles) on a MiSeq System (Illumina).
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bioRxiv - Microbiology 2020Quote: ... At Gdansk two independent protocols were used for SARS-CoV-2 genome sequencing: Illumina RNA prep with enrichment for respiratory virus oligos panel V2 followed by Illumina MiniSeq medium output run that produced 150-nucleotide paired-end reads ...
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bioRxiv - Microbiology 2021Quote: ... The purified PCR products were then processed and sequenced using the NextSeq 75 – High Output (82 cycles in read 1, 8 cycles in index 1, and 8 cycles in index 2 SE reads) (Illumina). The sequencing data was analyzed using the Model-Based Analysis of Genome-wide CRISPR/Cas9 Knockout (MAGeCK ...
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bioRxiv - Microbiology 2021Quote: ... Sequencing was performed in paired-end mode with a SP flow cell (2 x 50 cycles) using NovaSeq 6000 sequencer (Illumina).
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bioRxiv - Microbiology 2021Quote: ... Illumina sequencing (2× 300 bp paired-end reads) was conducted using an Illumina MiSeq platform (Illumina, San Diego, California, USA) at JAMSTEC ...