Labshake search
Citations for Illumina :
7901 - 7950 of 10000+ citations for HDM Fluorescent Kit 2 Plate since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2022Quote: ... Further library preparation of rRNA-depleted samples was performed using TruSeq Stranded mRNA library preparation kit (Illumina, RS-122-2101) according to the manufacturer’s instructions apart from omitting the initial steps for mRNA pull-down ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Sequencing was performed on a MiSeq system with the reagent kit v3 with 600 cycles (Illumina, San Diego, CA, USA) as recommended by the manufacturer and resulted in a minimum average coverage of 88× per strain (coverage range was from 88× to 157×) ...
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bioRxiv - Cell Biology 2022Quote: ... RNA library was constructed with 10x-Genomics Single Cell 3’ RNA sequencing kit v3 as previously described(18) sequenced using a NextSeq500 (Illumina). Cell clusters were characterized using an automated annotation tool(19 ...
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bioRxiv - Immunology 2022Quote: ... The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2022Quote: ... Illumina sequencing libraries were prepared from the PCR-amplified cDNA from mutant lungs and controls using the Nextra DNA library prep kit (Illumina). Libraries were sequenced on a NovaSeq 6000 S Prime flowcell (Illumina ...
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bioRxiv - Cell Biology 2022Quote: The iROND samples and embryonic RNA samples were reverse transcribed into cDNA libraries using the TruSeqTM RNA Sample Preparation Kit (Illumina). RNA sequencing was performed with an Illumina HiSeq™ 3000 or HiSeq X Ten platform ...
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bioRxiv - Cell Biology 2022Quote: ... The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot- HS (Illumina) according to the manufacturer’s instructions.
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bioRxiv - Neuroscience 2021Quote: ... ~600 pg of purified cDNA was used to produce a RNA-seq library using Nextera XT DNA Library Preparation kit (FC-131-1024, Illumina), following the manufacturer instructions.
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bioRxiv - Microbiology 2020Quote: ... products above the typical 75-nucleotide phage attP were gel purified and prepped for deep-sequencing with the TruSeq Nano kit (Illumina). DNA was sequenced using 150-nucleotide single-end read with an Illumina MiSeq ...
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bioRxiv - Molecular Biology 2020Quote: One μg of total RNA of high quality (RIN>8) was used for sequencing with a TruSeq RNA sample preparation kit (Illumina). We here included 99 islet samples in addition to the 89 islet samples and processed them uniformly following the same protocol as described previously (8) ...
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bioRxiv - Microbiology 2020Quote: Clustering of index-coded samples was performed on a cBot Cluster Generation System using TruSeq PE Cluster Kit v4-cBot-HS (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2021Quote: Sequencing libraries were prepared with the Illumina TruSeq stranded mRNA sample preparation kit according to the manufacturer’s protocol (Illumina, USA). In brief ...
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bioRxiv - Plant Biology 2021Quote: ... This modified version of the SMART-seq2 and SCRB-seq protocols allowed multiplexed pooling of 96 samples before library preparation with the Nextera XT DNA sample prep kit (Illumina). The protocol returned 3’-biased cDNA fragments similar to the Drop-Seq protocol (Macosko et al. ...
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bioRxiv - Microbiology 2020Quote: ... The clustering of the index-coded samples was performed on a cBot Cluster Generation System using TruSeq PE Cluster Kit v3-cBot-HS (Illumina), and the library preparations were then sequenced on an Illumina NovaSeq 6000 platform and 150 bp paired-end reads were generated ...
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bioRxiv - Immunology 2020Quote: ... Use of 250 pg of cDNA with 1/5 reaction of Illumina Nextera XT kit (Illumina, San Diego, CA, USA). The length distribution of the cDNA libraries was monitored using DNA High Sensitivity Reagent Kit on the Perkin Elmer Labchip GX system (PerkinElmer ...
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bioRxiv - Immunology 2020Quote: ... PCR products for TCRα and TCRβ were either subjected to Sanger sequencing or multiplexed with barcodes and subjected to MiSeq sequencing (Han et al., 2014) using True Seq Nano kit (Illumina). For Miseq data ...
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bioRxiv - Microbiology 2020Quote: ... Biological triplicate samples for each strain were then pooled at equal RNA concentrations and ribosomal RNA was removed using a Ribo-Zero Kit for Gram Positive Bacteria (Illumina). Following this ...
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bioRxiv - Microbiology 2021Quote: ... The purified DNA was then diluted to 0.25 ng/μL and prepared for sequencing with the Nextera XT DNA library prep kit (Illumina, USA). Libraries were sequenced on an Illumina MiSeq using a 300 cycle v2 kit (150 nt paired end reads) ...
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bioRxiv - Microbiology 2021Quote: ... Library preparation and sequencing was carried out by MR DNA following Illumina library preparation protocols using MiSeq Reagent Kit v3 (Illumina).
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bioRxiv - Developmental Biology 2021Quote: ... Libraries were generated using Kapa Biosystems library preparation kit (#KK8201) and multiplexed libraries were sequenced on a 1×75 flow cell on the HiSeq2000 platform (Illumina). Reads were filtered and trimmed to remove adapter-derived or low-quality bases using Trimmomatic and checked again with FASTQC ...
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bioRxiv - Developmental Biology 2021Quote: ... sRNA libraries for dicer-null embryos were prepared using Illumina TruSeq Small RNA Sample Prep kit (Illumina, RS-200-0012) and sequenced on HiSeq 50bp single-end sequencing platform ...
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bioRxiv - Neuroscience 2020Quote: ... Five hundred ng of RNA per sample was used to prepare a dual-indexed strand-specific cDNA library using TruSeq Stranded mRNA library Prep Kit (Illumina). The resulting libraries were assessed for their quality and size distribution using Qubind Agilent 2100 Bioanalyzer ...
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bioRxiv - Cancer Biology 2020Quote: ... then 60 ng was used for library preparation using KAPA Stranded RNA-Seq Library Preparation Kit (Illumina, KR0934 – v 1.13). The samples were barcoded and pooled in sets of eight per run to generate paired 150-bp reads with NextSeq 550 Sequencing System (Illumina) ...
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bioRxiv - Microbiology 2020Quote: ... Libraries diluted to 4 nM were sequenced with NextSeq 500 High Output Kit v2 (75 cycles) on a NextSeq 500 (Illumina). Small RNA libraries have been submitted to the NCBI sequence read archive (SRA ...
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bioRxiv - Plant Biology 2021Quote: ... Libraries were constructed using the Nextera DNA preparation kit and sequenced on an Illumina Hi-Seq 2500 platform (paired-end 125 bp reads) (Illumina). Quality control reports for the raw sequencing reads were generated using FastQC (Andrews ...
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bioRxiv - Plant Biology 2021Quote: ... Samples with a RIN value of > 7 were used for library preparation (Illumina TruSeq Stranded Total RNA kit, Illumina, USA) and sequenced on an Illumina HiSeq 4000 to obtain 150bp paired-end reads ...
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bioRxiv - Microbiology 2020Quote: Sequencing libraries were prepared for each product of long PCR (ranging from 15 to 33 kb) using the Nextera XT DNA Sample Preparation Kit (Illumina) and sequenced on the Illumina MiSeq platform to generate paired-end (PE ...
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bioRxiv - Genomics 2020Quote: ... Wild-type cultured aortic ECs were used to generate the immunoprecipitated and input control libraries using TruSeq DNA Sample Prep Kit v2 (Illumina) following manufacturer’s direction ...
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bioRxiv - Microbiology 2021Quote: ... 5–10 × 106 50-bp paired-end reads were obtained for each sample on an Illumina HiSeq 2500 using the TruSeq SBS Kit v3 (Illumina). Post-run demultiplexing and adapter removal were performed and fastq files were inspected using fastqc (Andrews S ...
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bioRxiv - Genomics 2019Quote: ... Library preparation was performed as per the 10X Genomics Genome Library protocol (https://support.10xgenomics.com/genome-exome/library-prep/doc/user-guide-chromium-genome-reagent-kit-v2-chemistry) and uniquely barcoded libraries were prepared and multiplexed for sequencing by Illumina HiSeq ...
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bioRxiv - Genomics 2019Quote: ... and then subjected to library construction using a TruSeq DNA PCR-Free HT sample prep kit (Illumina; San Diego, CA). The libraries were sequenced on a HiSeq 2500 system (Illumina ...
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bioRxiv - Cancer Biology 2021Quote: ... Tumor DNA was isolated using the Qiagen Blood and Tissue Kit and sgRNA cassette was amplified similarly to the in vitro screen and analyzed by Illumina sequencing ...
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bioRxiv - Microbiology 2021Quote: ... libraries were prepared as described previously (Steglich et al., 2018) and sequenced on an Illumina NextSeq 500 machine using a Mid-Output kit (Illumina) with 300 cycles ...
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bioRxiv - Microbiology 2021Quote: ... On-board cluster generation and paired-end sequencing was completed on the NextSeq 550 (Ilumina) using a High Output 150 cycle kit (Illumina). The average cluster density was 177 k/mm2 resulting in 420 million reads passing filter per run ...
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bioRxiv - Molecular Biology 2019Quote: Genomic DNA for whole-genome sequencing (WGS) analysis was isolated directly from bacterial colonies using the Nextera DNA Flex Microbial Colony Extraction kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2020Quote: ... Each library was adjusted to a concentration of 20 pM and was sequenced with a MiSeq Reagent kit v3 for 150 cycles by an Illumina MiSeq Sequencing System (Illumina). An efficiency of 25 million sequence reads per flow cell was achieved.
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bioRxiv - Immunology 2020Quote: ... after which pooled libraries were sequenced on an Illumina NovaSeq 6000 using the NovaSeq 6000 S2 Reagent Kit (100 cycles) (Illumina).
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bioRxiv - Microbiology 2021Quote: The second stage PCR procedure attached unique index primers to each sample using the Nextera XT v2 set A kit (Illumina). Purified DNA (5 μl ...
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bioRxiv - Microbiology 2021Quote: ... UK). Libraries were prepared from 8 samples (4× T. brucei, 4× T. congolense) using the TruSeq Stranded mRNA kit (Illumina) and 2 × 75 bp paired-end sequencing was carried out using a HiSeq 4000 system (Illumina) ...
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bioRxiv - Neuroscience 2021Quote: ... Library concentration was determined with an Agilent 2100 Bioanalyzer after which 8 samples were pooled and sequenced using HiSeq Rapid SBS Kit v2 (50 cycles) using paired end reads on a HiSeq2500 (Illumina).
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bioRxiv - Cancer Biology 2019Quote: ... tagmentation was carried out on double-stranded cDNA using the Nextera XT Library Sample Preparation kit (Illumina, FC-131-1096). Each well was mixed with 0.8 µl Nextera tagmentation DNA buffer (Illumina ...
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bioRxiv - Cancer Biology 2020Quote: ... The 3’ end enriched cDNA libraries were prepared by tagmentation reaction of 600 pg cDNA library using the standard Nextera XT tagmentation kit (Illumina). Reactions were performed according to the manufacturer’s instructions ...
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bioRxiv - Immunology 2020Quote: RNA-seq libraries were constructed from up to100 ng of total RNA using the TruSeq RNA Sample Prep Kit v2 (Illumina). Libraries were clustered on a flowcell using the TruSeq Paired-end Cluster Kit ...
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bioRxiv - Microbiology 2021Quote: ... The library was prepared using Nextera DNA Flex library preparation kit according to the manufacturer’s instructions (Illumina, San Diego, CA). The library was diluted to 1.0nM ...
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bioRxiv - Microbiology 2021Quote: ... cDNA library was prepared by using NEB Next Ultra RNA Library Prep Kit for Illumina (New England Biolab, Cat# E7530) and whole genome sequencing was performed by Miseq (Illumina).
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bioRxiv - Evolutionary Biology 2021Quote: ... Two paired-end Illumina libraries containing 250 and 600 bp insertions (DRR029525 and DRR029526) were constructed using a TruSeq DNA Sample Prep Kit (Illumina). Three mate-pair libraries with 3000 ...
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bioRxiv - Evolutionary Biology 2021Quote: ... A paired-end Illumina library (DRR029460; see also Supplementary File 1) was constructed using a TruSeq Stranded mRNA LT Sample Prep Kit (Illumina) and an RNA sample extracted from an E ...
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bioRxiv - Microbiology 2021Quote: ... Next-generation sequencing was performed using a Nextera XT DNA library preparation kit and the NextSeq 500 sequencing systems (Illumina) at the Mutualized Platform for Microbiology (P2M ...
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bioRxiv - Microbiology 2019Quote: ... Indexed libraries were created from purified community DNA using the NexteraXT DNA Sample Prep kit (Illumina, San Diego, CA, USA) following manufacturer instructions ...
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bioRxiv - Microbiology 2021Quote: ... DNA libraries preparation with 16 cycles of PCR amplification and sequencing were done following manufacturer instructions (TruSeq ChIP-Library kit, NextSeq 500/550, Illumina).