Labshake search
Citations for Illumina :
7701 - 7750 of 9536 citations for Mouse Stress Induced Phosphoprotein 1 STIP1 ELISA Kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cell Biology 2023Quote: ... Illumina sequencing libraries were indexed with unique 5’ and 3’ barcode combinations (up to 384 cells) using the Nextera XT DNA library preparation kit (Illumina). Libraries were pooled and size-selected with 0.9X AmpPure XP beads ...
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bioRxiv - Cancer Biology 2023Quote: ... The libraries were sequenced on the S4 300 cycle kit flow (2×151 paired end reads) using the XP workflow as outlined by Illumina. FASTQ outputs were generated.
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bioRxiv - Bioengineering 2023Quote: RNA was extracted from the spinal cord and prepared for RNA sequencing with TruSeq Standard mRNA sample Prep Kit (Illumina). Deep sequencing was performed on the Illumina NovaSeq6000 ...
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bioRxiv - Cancer Biology 2023Quote: Total RNA isolated from murine mammary adipose tissue contralateral to the tumor was used to prepare sequencing libraries with Illumina TruSeq Stranded Total RNA Sample Preparation kit and sequenced using an Illumina HiSeq 2000 instrument (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... NEBNext Low Input RNA libraries were prepared manually following the manufacturer’s protocol (NEBNext® Single Cell/Low Input RNA Library Prep Kit for Illumina® Instruction Manual Version 5.0_5/20 ...
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bioRxiv - Microbiology 2023Quote: ... Next-generation sequencing was performed by the P2M facility at Institut Pasteur using the Nextera XT DNA Library Preparation kit (Illumina), the NextSeq 500 sequencing systems (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were prepared following the amplicon protocol which includes the use of indexes from the Nextera XT Index Kit v2 (Illumina). Library preparation was done according to Illumina amplicon protocol (Illumina ...
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bioRxiv - Developmental Biology 2023Quote: ... The clustering of the index-coded samples was performed by Novogene on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina). Paired-end clean reads were mapped to the reference genome using HISAT2 software and for samples with biological replicates ...
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bioRxiv - Developmental Biology 2023Quote: Oocyte and granulosa cell samples were processed for full-length cytoplasmic RNA amplification using a slightly modified SMART-seq2 protocol.108 Libraries for next generation sequencing were prepared using Nextera XT DNA library Prep Kit (Illumina). Briefly ...
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bioRxiv - Plant Biology 2023Quote: ... Library preparation and sequencing were carried out according to the instructions with the TruSeq RNA Library Prep Kit v2 (Illumina) and NextSeq 500/550 High Output Kit (Illumina) ...
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bioRxiv - Neuroscience 2023Quote: ... RNA libraries were prepared for sequencing by the Cancer Genomics Shared Resource (Wake Forest University School of Medicine, Winston-Salem, NC) using the TruSeq-stranded total RNA kit (Illumina), which includes a ribosomal depletion step ...
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bioRxiv - Evolutionary Biology 2023Quote: ... We prepared short-insert (350 bp) paired-end (PE) libraries from 100 ng of gDNA using a TruSeq Nano DNA LT Library Preparation Kit (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2023Quote: ... Libraries were sequenced on the Illumina NextSeq 500 over two NextSeq 500 High Output v2.5 150 cycle kits (Illumina; 20024907) to generate > 25,000 raw reads per cell for each sample ...
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bioRxiv - Physiology 2023Quote: ... followed by onboard clonal clustering of the patterned flow cell using the NovaSeq 6000 S1 Reagent Kit v1.5 (200 cycle) (Illumina 20028318). A 2x101 cycle sequencing profile with dual index reads is completed using the following sequence profile ...
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bioRxiv - Plant Biology 2023Quote: ... A paired-end library with insert sizes ranging from 450 to 550 bp was constructed using the TruSeq DNA PCR-Free Library Prep kit (Illumina) and was size-selected on an agarose gel using a Zymoclean Large Fragment DNA Recovery Kit (Zymo Research ...
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bioRxiv - Neuroscience 2023Quote: ... The clustering of the index-coded samples was performed on a cBot cluster generation system using HiSeq PE Cluster Kit v4-cBot-HS (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2023Quote: ... The cDNA library was then fragmented and indexed using the Nextera DNA Library Preparation kit (Illumina, San Diego, CA, USA). The library quality was checked on a BioAnalyzer high-sensitivity chip and concentration was quantified by Qubit assays (ThermoFisher ...
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bioRxiv - Physiology 2023Quote: ... Libraries were prepared using the Takara SMART-Seq v4 Ultra low input RNA kit and analyzed on a NovaSeq platform (Illumina) using paired-end (PE100/150 ...
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bioRxiv - Neuroscience 2023Quote: ... Pooled libraries were sequenced on the Illumina NextSeq 500 platform using the High Output Kit v2.5 for 150 Cycles (Illumina, 20024907).
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bioRxiv - Physiology 2023Quote: ... mRNA-Seq libraries were then prepared using the Illumina Nextera XT DNA Library Preparation kit (Illumina Cat # FC-131-1024). 1 ng of cDNA was used as input and 12 amplification cycles were used during PCR enrichment ...
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bioRxiv - Genomics 2023Quote: Barcoded RNA-seq libraries were prepared by Edinburgh Genomics using the Illumina TruSeq stranded mRNA-seq kit (Illumina, Cambridge, UK). RNA (> 1200 ng ...
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bioRxiv - Plant Biology 2024Quote: ... NEXTflexTM Rapid DNA-seq Library Prep Kit was used to prepare and index libraries before sequencing on HiSeq 2500 (Illumina) with two lanes per sample ...
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bioRxiv - Neuroscience 2024Quote: ... Single-end sequencing of libraries was performed on a NextSeq 500 sequencer with a 75-cycle high-output kit (Illumina).
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bioRxiv - Systems Biology 2023Quote: ... Indexed amplicons were sequenced on an Illumina MiSeq with 150 cycles and the v3 reagent kit (Illumina, MS-102-3001). The reads were aligned to the expected amplicon sequences (N20 corresponding to the spacer region flanked by backbone sequences ...
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bioRxiv - Plant Biology 2023Quote: ... value of 8 was employed for RNA-Seq library construction using the TruSeq Stranded Total RNA Library Prep Plant kit (Illumina). Hisat2 (Kim et al. ...
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bioRxiv - Microbiology 2023Quote: ... RNA was isolated by directly lysing the cells with RLT buffer and using RNeasy Mini kits and used to prepare TruSeq Stranded mRNA (Illumina) sequencing libraries ...
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bioRxiv - Microbiology 2023Quote: ... paired-end cDNA libraries were prepared from cell or EV total RNA by polyA selection using the TruSeq Stranded mRNA kit (Illumina) according to manufacturer’s instructions ...
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bioRxiv - Neuroscience 2023Quote: ... Eighteen pM libraries were clustered in a high-output flow cell using HiSeq Cluster Kit v4 on a cBot (Illumina). After cluster generation ...
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bioRxiv - Microbiology 2023Quote: ... M9-glycerol or at distinct phases of infection) was subjected to tagmentation using the Nextera DNA Library Prep Kit (Illumina). The DNA was mixed with 10 μL of 2x TD Buffer and 5 μL of Tagment DNA Enzyme TDE1 (diluted 1/50 in 0.5x TE buffer and 50 % (v/v ...
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bioRxiv - Molecular Biology 2023Quote: ... Purified libraries were controlled by capillary electrophoresis (LabChip - Perkin) and quantitated by qPCR (KAPA Library Quantification Kits Illumina Platforms - Roche). Pooled libraries (12 pM ...
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bioRxiv - Immunology 2023Quote: ... Whole-genome sequencing (WGS) was performed using the Illumina NovaSeq 6000 with the S4 reagent kit (300 cycles) (Illumina, USA) with 2 × 150 bp paired-end reads ...
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bioRxiv - Genomics 2023Quote: ... we prepared stranded cDNA libraries for 909 samples from 695 sepsis patients using NEB Ultra II LIbrary Prep kits (Illumina) with NEBNext Poly(A ...
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bioRxiv - Genomics 2023Quote: ... 1 ng of the purified fragment was then used to prepare sequencing libraries with the Nextera XT DNA Library Preparation Kit (Illumina, Cat # FC-131-2002 or Cat # FC-131-1024 ...
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bioRxiv - Genomics 2023Quote: ... The sequencing libraries were generated on the streptavidin C1 beads using Illumina Tagment DNA Enzyme and Buffer kit (Illumina, 20034198) and run on the Illumina Novaseq S4 flowcell.
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bioRxiv - Microbiology 2023Quote: ... Libraries were constructed using the Illumina Stranded Total RNA library preparation protocol and rRNA was removed using the Ribo-Zero Plus rRNA depletion kit (Illumina). Libraries were sequenced on the Illumina NovaSeq 6000 platform (paired-end ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced on the Illumina NextSeq500 platform with paired ends for 2 x 150-base pair reads using a Mid-output cartridge Kit v2.5 (Illumina, 20024905). bcl2fastq software was used to demultiplex and compress bcl files into fastq (gz ...
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bioRxiv - Neuroscience 2023Quote: ... after which onboard clonal clustering of the patterned flow cell was performed using a NovaSeq 6000 S1 Reagent Kit v1.5 (200 cycle) (Illumina 20028318). A 2x101 cycle sequencing profile with dual index reads was completed using the following sequence profile ...
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bioRxiv - Molecular Biology 2023Quote: ... 11200g for five minutes prior to dividing the lysate for either nuclease foot-printing with RNaseI for generation of the ribosome profiling libraries or total RNA extraction followed by removal of rRNA with RiboZero (plant leaf kit, Illumina) for the corresponding RNA-Seq library.
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bioRxiv - Microbiology 2023Quote: ... The libraries were sequenced in a 250-bp paired-end run using the MiSeq Reagent Kit v2 (Illumina; 500 cycles).
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bioRxiv - Neuroscience 2023Quote: ... The cDNA samples that passed quality control were used to generate sequencing libraries using the Nextera XT DNA Library Preparation Kit (Illumina), following the user guide ...
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bioRxiv - Biochemistry 2023Quote: ... Libraries were then performed by PCR with a library preparation kit (Vazyme, TD501) and sequencing was done using the Novaseq system (Illumina) according to the manufacturer’s protocol.
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were prepared by the Sequencing Facility at NCI-Leidos using the TruSeq Stranded mRNA Kit (Illumina, San Diego, CA) and sequenced paired-end on NextSeq (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... The 100-cycle paired end sequencing run was performed using a NovaSeq 6000 S1 Reagent Kit v1.5 200 cycle (Illumina 20028318). Sequence data was converted to fastq files ...
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bioRxiv - Cancer Biology 2023Quote: ... RNA samples were sequenced using Truseq Stranded Total RNA Library Prep Kit and Illumina HiSeq4000 PE100 (Illumina, San Diego, CA) by the Genome Quebec Innovation Centre ...
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bioRxiv - Bioengineering 2023Quote: ... pair-end single index sequencing parameters were adjusted to 101/6/0/86 (as opposed to 74/6/0/86) to effectively utilize the capabilities of the NovaSeq 200 cycle reagent kit (Illumina). To demultiplex each sample and to generate the matrix of transcript counts in each cell ...
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bioRxiv - Evolutionary Biology 2023Quote: ... was performed on two lanes of an Illumina HiSeq3000 using a paired-end read length of 2×150 bp with the Illumina HiSeq3000 sequencing kits (Illumina) at the GeT-PlaGe core facility ...
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bioRxiv - Cancer Biology 2023Quote: Bead-purified cDNA pools were used for tagmentation-based library preparation with a Nextera XT DNA Library Preparation Kit (Illumina) using a custom PCR amplification strategy to generate 3’ biased libraries containing oligodT cell barcodes as previously published,60 with some modifications ...
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bioRxiv - Cell Biology 2023Quote: ... Cells were processed according to Chromium 3’ Gene Expression V3 Kit (10X Genomics) using the manufacturer’s guidelines followed by sequencing on an S1 Novaseq chip (Illumina Inc.) at the Genomics Core of Icahn School of Medicine at Mount Sinai.
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bioRxiv - Cancer Biology 2023Quote: ... a total RNA input of 200 ng was used for library preparation using the Illumina Stranded Total RNA Prep with Ribo-Zero Plus Kit (Illumina) and IDT for Illumina RNA UD Indexes Set A ...
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bioRxiv - Cancer Biology 2023Quote: ... 100 ng DNase treated RNA was used to generate ribo-minus treated total RNA stranded libraries using Illumina Stranded Total RNA Prep Ligation with Ribo-Zero Plus kit (Illumina) according to manufactures’ instructions ...