Labshake search
Citations for Illumina :
701 - 750 of 8917 citations for Mouse Eukaryotic translation initiation factor 4E binding protein 3 EIF4EBP3 ELISA Kit since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2022Quote: We sequenced the pooled sample containing PCR products using Illumina MiSeq technology (Illumina Reagent Kit v2, 500 reaction kit) at the Center for Bioinformatics and Genomics at Indiana University ...
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bioRxiv - Genetics 2022Quote: ... Normalised DNA libraries were clustered on Illumina cBot then sequenced using Illumina HiSeq X Ten platform using HiSeq X Ten Reagent Kit v2.5 kits (FC-501-2501, Illumina). Paired end sequencing was performed using the 2×150bp chemistry to achieve an average output of approximately >120 Gb of data per library.
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bioRxiv - Microbiology 2023Quote: ... The sequencing libraries were built from Genomic DNA using Nextera DNA Flex Library Preparation Kit with Nextera XT Index kit based on the manufacturer’s protocols (Illumina). Libraries were quality-checked and quantified using TapeStation (Agilent Technologies ...
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bioRxiv - Genomics 2023Quote: NGS libraries from DRIP DNA and inputs were constructed according to the manufacturer’s instructions (KAPA Hyper Prep Kit: Roche, cat. no. #KK8502 kit and single- indexed adapters from Illumina, cat ...
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bioRxiv - Genomics 2024Quote: ... and NP0550 on either a NextSeq 550 using a NextSeq 500/550 High Output v2.5 75 cycle kit or on a NextSeq 2000 using a NextSeq 1000/2000 P3 50 cycle kit (Illumina).
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bioRxiv - Microbiology 2024Quote: ... Libraries were sequenced with a Nextseq 2×150 pb paired-end reagent kit (NextSeq 500/550 High Output Kit v2.5, Illumina) on an Illumina Nextseq500 sequencer ...
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bioRxiv - Cell Biology 2022Quote: Gene expression was measured with the Illumina Mouse Whole Genome array (Illumina Inc.,San Diego,CA,USA). Sample preparations ...
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bioRxiv - Cancer Biology 2019Quote: ... gene expression analysis was performed using Illumina’s Mouse Ref 8 Beadchip v1 (Illumina Inc, San Diego, CA). These datasets have been deposited in GEO as accession entry GSE22520 and described in Supplemental Table 1c ...
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bioRxiv - Developmental Biology 2023Quote: Sequenced reads were mapped to and annotated by using the mouse reference genome GRCm38/mm10 (iGenomes, Illumina; archive-2015-07-17-32-40 and archive-2015-07-17-33-26 for GRCM38 and mm10 ...
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bioRxiv - Developmental Biology 2019Quote: The BRB-seq is a technique for multiplexed RNA-seq16 which is able to provide high-quality 3’ transcriptomic data at a low cost (e.g. 10-fold lower than Illumina Truseq Stranded mRNA-seq). The data (fastq files ...
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bioRxiv - Evolutionary Biology 2021Quote: ... All three reactions were pooled in equal-molar ratios and sequenced (paired end 300 bp) on one lane of Illumina MiSeq version 3 chemistry (Illumina, San Diego, California). The final reaction comprising 21 libraries with DNA concentrations 11.4 – 20.0 ng/μl was performed and sequenced as above.
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bioRxiv - Systems Biology 2021Quote: Single nuclear 3’ RNA-sequencing was performed at the Indiana University Center for Medical Genomics Core using the Chromium single cell system version 3 (10x Genomics, San Francisco, CA) and the NovaSeq6000 sequencer (Illumina, San Diego, CA). Cell Ranger 4.0 was utilized to generate sample-specific FASTQ files and reads were aligned to the mm10 reference genome using STAR ...
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bioRxiv - Molecular Biology 2022Quote: ... The forward primers were 5’-CAA GCA GAA GAC GGC ATA CGA GAT XXX XXX GTG ACT GGA GTT CCT TGG CAC CCG AGA ATT CCA-3’ (in which XXX XXX represents Illumina’s indexing hexanucleotide sequences), and the reverse primer was 5’-AAT GAT ACG GCG ACC ACC GAG ATC TAC ACG TTC AGA GTT CTA CAG TCC GA-3’ ...
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bioRxiv - Neuroscience 2021Quote: ... and a reverse primer 5′-GGA GTT CAG ACG TGT GCT CTT CCG ATC TTA CCA GGG TAT CTA ATC CT-3′ (28-nt Illumina adapter (in bold) followed by the 19 nt broad range bacterial primer 784R) ...
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bioRxiv - Neuroscience 2021Quote: ... a forward primer 5′-CTT TCC CTA CAC GAC GCT CTT CCG ATC TAC GGR AGG CAG CAG-3 (28-nt Illumina adapter (in bold) followed the 14 nt broad range bacterial primer 343F ...
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bioRxiv - Cancer Biology 2020Quote: ... Exome capture was performed in pools of 3 and subjected to paired end 75 sequencing on a HiSEQ4000 platform (Illumina, San Diego, USA).
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bioRxiv - Molecular Biology 2019Quote: ... Biomark Access Array system followed by sequencing with 2×225 base pair reads on a MiSeq instrument using version 3 chemistry (Illumina, San Diego, CA). FASTQ files were processed through a custom bioinformatics pipeline (ScanIndel ...
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bioRxiv - Cell Biology 2020Quote: ... DNA fragments were end-paired and phosphorylated at the 5’ end and successively adenylated at the 3’ end (following Illumina paired-end protocols), and the libraries ligated to the precapture adaptor were amplified and indexed via PCR ...
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bioRxiv - Neuroscience 2021Quote: ... The 3’ gene expression libraries and HTO sequencing libraries were pooled and sequenced at an approximate depth of 50,000 reads per cell for the 3’ gene expression libraries and 5,000 reads for HTO libraries using the NovaSeq S1 (Illumina, San Diego, CA, USA) flow cells.
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bioRxiv - Cancer Biology 2023Quote: ... Exome capture was achieved in pools of 3 and subjected to paired end 75 sequencing on a NovaSeq platform (Illumina, San Diego, USA) at 40x depth for blood samples and 80x depth for tumour samples ...
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bioRxiv - Neuroscience 2024Quote: Libraries were generated using the QuantSeq 3’ (Lexogen) mRNA protocol and subsequently sequenced using the Illumina HiSeq 4000 (Illumina; 50bp single end reads). On average 8.2M reads were obtained for each of the 10 replicate samples collected from each age (6- ...
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bioRxiv - Developmental Biology 2021Quote: ... with 100-bp single-end reads using a TruSeq SR Cluster Kit v3-cBot-HS and TruSeq SBS Kit v3-HS (Illumina). Sequenced reads were processed using an Illumina standard base-calling pipeline (v1.8.2) ...
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bioRxiv - Genetics 2021Quote: ... Full-length cDNA was prepared using the SMART-Seq v4 Ultra Low Input RNA Kit for Sequencing and sequencing libraries prepared using the Nextera XT DNA library preparation kit (Illumina). The resulting libraries were evaluated using a 4200 TapeStation (Agilent Technologies ...
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bioRxiv - Developmental Biology 2020Quote: ... with a Hiseq PE Rapid Cluster Kit v2-HS and Hiseq Rapid SBS Kit v2-HS (200 Cycle) on a Hiseq2500 (Illumina) was performed following manufacturer’s protocol ...
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bioRxiv - Genomics 2022Quote: ... japonicum was isolated with the SigmaAldrich GenElute Mammalian genomic DNA kit and an sequencing library was prepared with the TruSeq Nano DNA Library Prep Kit (Illumina) and sequenced on an Illumina NovaSeq6000 to generate 150 bp paired-end reads.
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bioRxiv - Molecular Biology 2020Quote: ... and germfree C57BL/6J mice were prepared using the Clonetech SMARTer Ultra Low Input library preparation kit combined with Nextera XT DNA sample preparation kit (Illumina) and sequenced with single-end 100 bp on a HiSeq2000 platform at the UNC High Throughput Sequencing Core Facility ...
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bioRxiv - Molecular Biology 2020Quote: ... The sequencing pool was adjusted to a final concentration of 11.5 pM (for V2 kits) or 18 pM (for V3 kits) and sequenced in a MiSeq system (Illumina, USA), using the standard Illumina primers provided by the manufacturer kit ...
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bioRxiv - Cancer Biology 2019Quote: ... Sample libraries were subsequently pooled and loaded to the HiSeq2500 and sequenced using a Hiseq rapid SRcluster kit and HiSeq rapid SBS kit (Illumina). Single 50bp reads were generated for the bioinformatic analysis ...
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bioRxiv - Neuroscience 2019Quote: ... Cluster generation was performed with the resulting libraries using the Illumina TruSeq PE Cluster Kit v4 reagents and sequenced on the Illumina HiSeq 2500 using TruSeq SBS Kit v4 reagents (Illumina). Sequencing data were demultiplexed using the bcl2fastq Conversion Software (version 2.20 ...
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bioRxiv - Genetics 2021Quote: ... The toRNA-seq and mRNA-seq libraries were generated using the Illumina TruSeq Stranded Total RNA kit and Stranded mRNA kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Evolutionary Biology 2021Quote: ... with up to 24 samples pooled per sequencing run by use of dual-index library preparation and the Nextera XT DNA Library Preparation kit and 300-cycle MiSeq Reagent v2 kit (Illumina), according to manufacturer’s instructions ...
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bioRxiv - Genomics 2020Quote: ... was performed on the instrument using HiSeq Rapid SBS Kit v2 (FC-402-4021) and HiSeq Rapid PE Cluster Kit v2 (PE-402-4002) (Illumina). Image analysis was performed using the HiSeq Control Software version 2.2.58 ...
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bioRxiv - Genomics 2021Quote: ... RNA was isolated with the Qiagen AllPrep DNA/RNA/miRNA Universal Kit and strand specific cDNA libraries prepared using the TruSeq RNA Sample Preparation Kit v2 (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2021Quote: ... Total 500 ng RNA processed for library preparation using “TruSeq” RNA sample preparation-V2 kit and “Ribo-Zero” rRNA removal kit (Illumina) according to manufacturer’s instruction ...
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bioRxiv - Genomics 2022Quote: ... The PCR products were purified with QIAquick Gel Extraction Kit and Qiagen MinElute PCR purification kits and were then sequenced on a Hiseq4000 (Illumina) with 150-bp paired-end sequencing.
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bioRxiv - Microbiology 2022Quote: ... plate-based RNA sample prep was performed on the PerkinElmer Sciclone NGS robotic liquid handling system using Illumina Ribo-Zero rRNA Removal Kit (Bacteria) and the TruSeq Stranded Total RNA HT sample prep kit following the protocol outlined by Illumina in their user guide ...
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SARS-CoV-2 Point Mutation and Deletion Spectra, and Their Association with Different Disease OutcomebioRxiv - Microbiology 2022Quote: ... and sequenced using MiSeq sequencing platform with MiSeq Reagent kit v3 (2 × 300 bp mode with the 600 cycle kit) (Illumina).
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bioRxiv - Molecular Biology 2022Quote: ... The samples were pre-amplified with the Nextera Index kit and the Nextera DNA Library Prep kit (both from Illumina), incorporating index sequences at the ends ...
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bioRxiv - Immunology 2020Quote: ... The enriched B cell libraries were sequenced in NextSeq or MiSeq sequencer using NextSeq Mid Output v2.5 sequencing reagent kit (read length: 2 × 150 bp) or MiSeq Reagent Kit v2 (read length: 2 × 150 bp) (Illumina) respectively.
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bioRxiv - Immunology 2020Quote: ... using NextSeq 500/550 v2.5 sequencing reagent kit (read length: 2 × 75 bp) or NovaSeq S1 sequencing reagent kit (read length: 2 × 100 bp) (Illumina) respectively ...
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bioRxiv - Neuroscience 2020Quote: ... The remaining batch was prepared with the TruSeq RNA Exome sample prep kit (formerly the TruSeq RNA Access sample prep kit; Illumina). All libraries were randomly pooled to multiplex 24 samples per lane using Illumina TruSeq barcodes ...
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bioRxiv - Immunology 2020Quote: ... Sequencing was performed in a high-throughput MiSeq machine using either a v2 Nano reagent kit 2×250bp or a v3 reagent kit 2×300bp (Illumina) at the Genomic Research Unit (GRU ...
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bioRxiv - Cancer Biology 2021Quote: ... or 150bp/150bp paired end run using the HiSeq Rapid SBS Kit v2 or NovaSeq 6000 SP/S1/S2/S4 Reagent Kit (100/200/300 cycles) (Illumina).
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bioRxiv - Microbiology 2022Quote: ... RNA was purified using QIAGEN RNeasy kit and ribosomal RNA was depleted using the Ribo-Zero rRNA removal magnetic kit (Illumina). The cDNA library was generated using the NEBNext Ultra II RNA Library Prep Kit and each replicate was barcoded in the DNA library using the NEBNext Multiplex Oligos for Illumina ...
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bioRxiv - Molecular Biology 2019Quote: ... and sequenced paired-end (PE) 2×150 on the Illumina MiSeq machine using 300-cycle MiSeq Reagent Kit v2 or Micro Kit v2 (Illumina). FASTQs (post-demultiplexing ...
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bioRxiv - Molecular Biology 2020Quote: PolyA+ RNA seq libraries were prepared using the SMART-Seq v4 UltraLow Input RNA kit (Clonetch) followed by the Nextera XT DNA library Prep kit (Illumina) according to the manufacturer recommendations from 3 biological replicates for each condition (P7 wild-type (WT) ...
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bioRxiv - Genomics 2019Quote: ... Multiplex sequencing libraries were generated using the TruePrepTM DNA Library Prep Kit V2 and the Nextera XT Index Kit (Illumina). Libraries were pooled and subjected to sequencing on an Illumina HiSeq 2000 (Illumina).
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bioRxiv - Cell Biology 2021Quote: ... and sequenced using the 100-bp paired-end mode of the TruSeq Rapid PE Cluster Kit and the TruSeq Rapid SBS Kit (Illumina).
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bioRxiv - Microbiology 2020Quote: ... The libraries pools were adjusted to a final concentration of 11.5 pM (for V2 kits) or 18 pM (for V3 kits) and sequenced in a MiSeq system (Illumina, USA), using the standard Illumina primers provided in the manufacturer kit ...
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bioRxiv - Microbiology 2020Quote: ... We sequenced pooled libraries using the Illumina MiSeq platform using paired end reads (Illumina Reagent Kit v2, 500 reaction kit) at the Indiana University Center for Genomics and Bioinformatics Sequencing Facility ...