Labshake search
Citations for Illumina :
6251 - 6300 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Molecular Biology 2021Quote: ... The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2020Quote: ... Sequencing libraries were generated using the TruSeq Stranded Total RNA with Ribo-Zero Human/ Mouse/Rat Low-throughput (LT) kit (Illumina) and run on a NextSeq 500 for paired-end sequencing using the NextSeq 500/550 High Output v2 Kit ...
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bioRxiv - Evolutionary Biology 2022Quote: ... we conducted RNA-seq library preparation with 1000 ng of total RNA per tissue sample as input and following the protocol of the Standard TruSeq Stranded mRNA Sample Prep Kit (Illumina) with indexing adapters ...
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bioRxiv - Cell Biology 2022Quote: ... Sequencing was performed on the Illumina HiSeq with single-end 125 bp using the HiSeq 3000/4000 SBS Kit (Illumina). Reads quality was checked with FastQC (https://www.bioinformatics ...
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bioRxiv - Cell Biology 2022Quote: ... Paired-end multiplexed sequencing of libraries to generate reads of 100 bp was performed on a HiSeq 1000 instrument with TruSeq SBS and PE Cluster v3 Kits (Illumina); 70–100 million reads per sample were obtained ...
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bioRxiv - Developmental Biology 2022Quote: 25.000 FACS-sorted cells were collected and used for ATAC Library preparation using Tn5 Transposase from Nextera DNA Sample Preparation Kit (Illumina). The cell pellet was resuspended in 50 µl Lysis/Transposition reaction (12.5 µl THS-TD-Buffer ...
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bioRxiv - Developmental Biology 2022Quote: ... cDNA libraries were prepared from 500 to 1000 ng of total RNA using the TruSeq Stranded mRNA Library Prep kit (Illumina) according to the manufacturer’s instructions and sequenced on a HiSeq 2500 (Illumina).
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bioRxiv - Immunology 2022Quote: ... Approximately 1ug of total RNA was used as an input material for library preparation using TruSeq RNA Sample Preparation Kit v2 (Illumina). Size of the libraries was confirmed using 2200 TapeStation and High Sensitivity D1K screen tape (Agilent Technologies ...
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bioRxiv - Immunology 2022Quote: ... Samples were processed for bulk RNA-sequencing by Q2 solutions using the TruSeq Stranded mRNA kit (Illumina: RS-122-2103) for library preparation ...
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bioRxiv - Microbiology 2022Quote: ... Total RNAs samples (3 μg) were depleted from ribosomal RNA using the bacteria Ribo-Zero® rRNA Removal kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2020Quote: ... Successful amplicons were screened on a 1.5% agarose gel and further purified using Agencourt AMPure XP PCR Purification kit before proceeding to Nextera XT DNA Library Preparation (Illumina), according to manufacture instructions ...
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bioRxiv - Genomics 2020Quote: Indexed DNA library for NGS was prepared using the TruSeq® Nano DNA HT Library Preparation Kit (Illumina, cat. 20015965) according to manufacturer’s recommendation ...
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bioRxiv - Genomics 2020Quote: 500 ng of RNA were used to prepare sequencing libraries using the Illumina TruSeq RNA Sample Preparation Kit v2 (RS-122-2001 & -2002, Illumina). Libraries were pooled into five master mixes containing 12 or 16 samples ...
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bioRxiv - Genomics 2020Quote: ... 50,000 nuclei were used in the transposition reaction including 2.5 µL Tn5 enzyme (Illumina Nextera DNA Flex Library Prep Kit), incubated for 30 minutes at 37 °C in a shaker at 200 rpm ...
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bioRxiv - Genomics 2020Quote: ... The libraries were amplified on cBot to generate the cluster on the flowcell (TruSeq PE Cluster Kit V3–cBot–HS, Illumina) and sequenced as paired-end on the HiSeq 2000 System (TruSeq SBS KIT-HS V3 ...
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bioRxiv - Genomics 2020Quote: ... DNA was sent to the UCSF Institute of Human Genetics Core for genotyping using SNP arrays (OmniExpress Exome kit, Illumina).
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bioRxiv - Genomics 2020Quote: ... DNA samples were processed using the Illumina TruSeq DNA PCR-Free Sample Preparation kit (Illumina Inc., San Diego, CA, USA) on the Hamilton Microlab Star (Hamilton Robotics ...
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bioRxiv - Genomics 2020Quote: ... Total RNA was subjected to ribosomal RNA (rRNA) depletion with the Ribo-Zero Gold rRNA Removal Kit (Illumina, CA, USA). RNA-seq libraries were prepared with SMARTer Universal Low Input RNA library Prep kit (Clontech ...
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bioRxiv - Microbiology 2021Quote: ... Library for Illumina sequencing (insert size of 500-900 bp) was prepared using Nextera XT DNA Library Prep Kit (Illumina). Paired-end sequencing was performed using MiniSeq (2 × 150 bp ...
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Pancreatic progenitor epigenome maps prioritize type 2 diabetes risk genes with roles in developmentbioRxiv - Genomics 2020Quote: ... single-end sequencing libraries were constructed from isolated RNA using the TruSeq® Stranded mRNA Library Prep Kit (Illumina®) and library sequencing was performed on either a HiSeq 4000 System (Illumina® ...
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bioRxiv - Genomics 2020Quote: ... Other libraries were sequenced on NextSeq 500 (1x 28 / 1×91 cycles plus 8 base index cycle) using the v2 150 cycle High Output kit (Illumina) as per the manufacturer’s instructions ...
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bioRxiv - Genomics 2020Quote: ... Paired-end libraries were prepared by the Purdue Genomics Core Facility using the Truseq DNA PCR-Free Sample Preparation Kit (Illumina). Whole-genome sequencing was performed using Illumina short-read technology (2×100bp ...
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bioRxiv - Genomics 2020Quote: ... single-end sequencing libraries were constructed from isolated RNA using the TruSeq® Stranded mRNA Library Prep Kit (Illumina®) and library sequencing was performed on either a HiSeq 4000 System (Illumina® ...
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bioRxiv - Genomics 2020Quote: ... Multiple mate-paired libraries (3, 8, 12 and 16 kb) were also constructed using the Nextera Mate-Paired Library Construction kit (Illumina). Libraries were sequenced on the Illumina HiSeq 2500 sequencer using the Illumina TruSeq PE Cluster kit v3 and TruSeq SBS kit v3 (101 ...
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bioRxiv - Microbiology 2020Quote: ... A total of 4 pools were sequenced on the Illumina MiSeq using the 600-cycle MiSeq Reagent Kit V3 (Illumina). Each pool contained 3 identical samples to assess sequencing run variations.
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bioRxiv - Genomics 2020Quote: Mate pair sequencing library was prepared using Illumina-compatible Nextera Mate Pair Sample Preparation Kit (Illumina Inc., Austin, TX, U.S.A.). About 4 μg of genomic DNA was simultaneously fragmented and tagged with mate pair adapters in a transposon based tagmentation step ...
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bioRxiv - Genomics 2020Quote: ... 64 RNA-Seq libraries (4 time points x 4 tissues x 4 biological replicates) were prepared using the TruSeq RNA Sample Preparation Kit (Illumina). Libraries were sequenced on Illumina Nova-Seq 6000 sequencing platform at the Australian Genome Research Facility (AGRF ...
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bioRxiv - Genomics 2020Quote: Illumina sequencing libraries of total RNA were prepared using the Illumina TruSeq Stranded Total RNA Human/Mouse/Rat kit (Cat number RS-122-2201) following the protocol provided by Illumina with Ribo-Zero.
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bioRxiv - Immunology 2021Quote: ... PCR products for TCRβ were multiplexed with barcodes and submitted for MiSeq sequencing (Han et al., 2014) using True Seq Nano kit (Illumina). Fastq files were de-multiplexed and paired-end reads were assembled at their overlapping region using the PANDASEQ (Masella et al. ...
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bioRxiv - Genetics 2020Quote: ChIP-seq and DNase-seq libraries were prepared from 1-5 ng ChIP DNA or DNase DNA samples using NEBNext Ultra II DNA library Prep Kit (Illumina). Libraries were sequenced on an Illumina NextSeq 500 with single-end or paired-end 75 bp reads.
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bioRxiv - Plant Biology 2020Quote: Total RNA was prepared into equimolar pools for each sample submitted to Indiana University’s Center for Genomics and Bioinformatics for cDNA library construction using a TruSeq Stranded mRNA LT Sample Prep Kit (Illumina) following the standard manufacturing protocol ...
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bioRxiv - Systems Biology 2020Quote: cDNA was tagmented and amplified using the Nextera XT DNA Library Preparation Kit (FC-131-1096, Illumina, San Diego, CA). The manufacturer’s protocol was followed with the following modified reagent volumes and primers ...
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bioRxiv - Microbiology 2020Quote: ... Illumina sequencing libraries were prepared using Nextera DNA Flex Library Prep Kit and Nextera DNA CD Indexes (Illumina, https://www.illumina.com) according to manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2020Quote: The strand-specific RNA-seq libraries for all the RNA samples were prepared using the TruSeq Stranded mRNA LT Sample Prep kit (RS-122-2101, Illumina) with 1 µg total RNA as input ...
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bioRxiv - Genetics 2020Quote: ... ChIP-seq and ATAC-seq libraries were quantified by RT-qPCR with the KAPA Library Quantification Complete Kit (KAPA) prior to sequencing on the NextSeq platform (Illumina) with 39 bp paired-end reads ...
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bioRxiv - Immunology 2020Quote: ... cDNA was harvested and diluted to 0.1–0.3 ng/μl and libraries were prepared in 96-well plates using a Nextera XT DNA Sample Preparation kit (Illumina) according to the protocol supplied by Fluidigm ...
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bioRxiv - Cancer Biology 2020Quote: ... Libraries were prepared from 1 μg of total RNA using a TruSeq Stranded Total RNA Kit with Ribo-Zero Human/Mouse/Rat (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Synthetic Biology 2020Quote: The pooled libraries were loaded on a MiSeq device and sequenced for 250 cycles from each end of the library fragments with a Nano V2 500 cycles kit (Illumina). The raw fastq files were generated and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina).
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bioRxiv - Physiology 2020Quote: ... Chip-enriched DNA was purified and 10ng of fragmented input DNA was used for the generation of the library using the TruSeq Chip Sample Prep Kit (Illumina). Briefly ...
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bioRxiv - Genomics 2020Quote: ... RNA was converted to cDNA and processed for NGS library prep using TruSeq Stranded Total RNA library prep kit (Illumina). Library profiles were analyzed using Bioanalyzer and sequenced on Illumina NovaSeq 6000 at a depth of 30 million reads per sample.
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bioRxiv - Genomics 2021Quote: ... Paired-end sequencing was completed using NextSeq 500/550 300-cycle High-Output Kits v 2.5 (Illumina; 2 × 150 cycles). High-Output kit used for the generation of the NextSeq data allows for over 25 times more sequence data to be generated compared to MiSeq v2 sequencing (800M versus 30M paired reads ...
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bioRxiv - Genomics 2021Quote: ... Whole-genome sequencing (WGS) libraries were generated from 150 ng DNA using the KAPA DNA HyperPlus kit and NovaSeq 6000 sequencing platform (Illumina).
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bioRxiv - Genomics 2021Quote: ... Sex8d and Sex10d samples were subject to ribosomal RNA (rRNA) depletion using the Ribo-Zero rRNA Removal Kit (Illumina, USA) according to the manufacturer’s protocol ...
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bioRxiv - Developmental Biology 2020Quote: ... Adaptors for indexing samples and sequencing were added to cDNA fragmented by Tn5-mediated tagmentation using the Nextera XT kit (Illumina). Finally ...
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bioRxiv - Developmental Biology 2020Quote: Library preparation for RNA-sequencing (RNA-seq) was performed as described 65 using the TruSeq Stranded mRNA Library Prep Kit (Illumina) and 100-110 ng of total RNA ...
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bioRxiv - Genomics 2021Quote: Hackflex libraries were prepared using laboratory-made and adapted reagents from the Nextera DNA Flex Library Prep kit (Illumina, USA) (Supplementary Table 1) ...
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Differences in orthodenticle expression promote ommatidial size variation between Drosophila speciesbioRxiv - Evolutionary Biology 2021Quote: Library preparation for RNA-seq was performed using the TruSeq RNA Sample Preparation Kit (Illumina, catalog ID RS-122-2002) starting from 500 ng of total RNA ...
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bioRxiv - Immunology 2020Quote: ... cDNA libraries were prepared from 1 μg of total RNA using the TruSeq Stranded mRNA kit (Illumina, San Diego, CA) and the Sciclone NGSx Workstation (Perkin Elmer ...
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bioRxiv - Evolutionary Biology 2020Quote: ... We generated RNA libraries for the Iowa City samples using the TruSeq Stranded mRNA kit (Illumina Inc., San Diego, CA) and DNA libraries for the remaining samples using the KAPA Hyper Prep kit (KAPA Biosystems ...
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bioRxiv - Cancer Biology 2021Quote: ... for single-cell RNA sequencing (with the 10X Genomics single-cell gene expression kit, a 400M read flow cell & single-end read using HiSeq from Illumina). 2,453 cells were sequenced with an average of 64,404 reads (and 3,457 genes ...