Labshake search
Citations for Illumina :
451 - 500 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2021Quote: ... RNA was isolated with the Qiagen AllPrep DNA/RNA/miRNA Universal Kit and strand specific cDNA libraries prepared using the TruSeq RNA Sample Preparation Kit v2 (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2021Quote: ... Total 500 ng RNA processed for library preparation using “TruSeq” RNA sample preparation-V2 kit and “Ribo-Zero” rRNA removal kit (Illumina) according to manufacturer’s instruction ...
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bioRxiv - Genomics 2022Quote: ... The PCR products were purified with QIAquick Gel Extraction Kit and Qiagen MinElute PCR purification kits and were then sequenced on a Hiseq4000 (Illumina) with 150-bp paired-end sequencing.
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bioRxiv - Microbiology 2022Quote: ... plate-based RNA sample prep was performed on the PerkinElmer Sciclone NGS robotic liquid handling system using Illumina Ribo-Zero rRNA Removal Kit (Bacteria) and the TruSeq Stranded Total RNA HT sample prep kit following the protocol outlined by Illumina in their user guide ...
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SARS-CoV-2 Point Mutation and Deletion Spectra, and Their Association with Different Disease OutcomebioRxiv - Microbiology 2022Quote: ... and sequenced using MiSeq sequencing platform with MiSeq Reagent kit v3 (2 × 300 bp mode with the 600 cycle kit) (Illumina).
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bioRxiv - Molecular Biology 2022Quote: ... The samples were pre-amplified with the Nextera Index kit and the Nextera DNA Library Prep kit (both from Illumina), incorporating index sequences at the ends ...
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bioRxiv - Immunology 2020Quote: ... The enriched B cell libraries were sequenced in NextSeq or MiSeq sequencer using NextSeq Mid Output v2.5 sequencing reagent kit (read length: 2 × 150 bp) or MiSeq Reagent Kit v2 (read length: 2 × 150 bp) (Illumina) respectively.
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bioRxiv - Immunology 2020Quote: ... using NextSeq 500/550 v2.5 sequencing reagent kit (read length: 2 × 75 bp) or NovaSeq S1 sequencing reagent kit (read length: 2 × 100 bp) (Illumina) respectively ...
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bioRxiv - Neuroscience 2020Quote: ... The remaining batch was prepared with the TruSeq RNA Exome sample prep kit (formerly the TruSeq RNA Access sample prep kit; Illumina). All libraries were randomly pooled to multiplex 24 samples per lane using Illumina TruSeq barcodes ...
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bioRxiv - Immunology 2020Quote: ... Sequencing was performed in a high-throughput MiSeq machine using either a v2 Nano reagent kit 2×250bp or a v3 reagent kit 2×300bp (Illumina) at the Genomic Research Unit (GRU ...
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bioRxiv - Cancer Biology 2021Quote: ... or 150bp/150bp paired end run using the HiSeq Rapid SBS Kit v2 or NovaSeq 6000 SP/S1/S2/S4 Reagent Kit (100/200/300 cycles) (Illumina).
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bioRxiv - Microbiology 2022Quote: ... RNA was purified using QIAGEN RNeasy kit and ribosomal RNA was depleted using the Ribo-Zero rRNA removal magnetic kit (Illumina). The cDNA library was generated using the NEBNext Ultra II RNA Library Prep Kit and each replicate was barcoded in the DNA library using the NEBNext Multiplex Oligos for Illumina ...
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bioRxiv - Cancer Biology 2022Quote: ... ScRNA-seq libraries were prepared using the Next GEM Chromium single cell 3′ reagent kits V3.1 with feature barcode technology for cell surface protein (10x genomics) and sequenced using NextSeq 500 high output kits and Novaseq S4 PE100 kits (Illumina). scRNA-Seq data after standard quality control was aligned to the reference genome (mm10 ...
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bioRxiv - Cancer Biology 2020Quote: ... 500 ng RNA was prepared with a commercially available kit according to the manufacturer’s instruction (QuantSeq 3′ mRNA-Seq Library Prep Kit FWD for Illumina and PCR Add-on Kit for Illumina, Lexogen). Sequencing was performed on an Illumina HiSeq2500 in 50bp single-read mode.
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bioRxiv - Cancer Biology 2020Quote: ... 500 ng alkylated RNA was used and prepared with a commercially available kit (QuantSeq 3′ mRNA-Seq Library Prep Kit FWD for Illumina and PCR Add-on Kit for Illumina ...
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bioRxiv - Molecular Biology 2020Quote: PolyA+ RNA seq libraries were prepared using the SMART-Seq v4 UltraLow Input RNA kit (Clonetch) followed by the Nextera XT DNA library Prep kit (Illumina) according to the manufacturer recommendations from 3 biological replicates for each condition (P7 wild-type (WT) ...
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bioRxiv - Cell Biology 2021Quote: ... and sequenced using the 100-bp paired-end mode of the TruSeq Rapid PE Cluster Kit and the TruSeq Rapid SBS Kit (Illumina).
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bioRxiv - Microbiology 2020Quote: ... The libraries pools were adjusted to a final concentration of 11.5 pM (for V2 kits) or 18 pM (for V3 kits) and sequenced in a MiSeq system (Illumina, USA), using the standard Illumina primers provided in the manufacturer kit ...
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bioRxiv - Microbiology 2020Quote: ... We sequenced pooled libraries using the Illumina MiSeq platform using paired end reads (Illumina Reagent Kit v2, 500 reaction kit) at the Indiana University Center for Genomics and Bioinformatics Sequencing Facility ...
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bioRxiv - Microbiology 2020Quote: DNA were extracted by QIAGEN DNeasy Blood and Tissue Kit and sequencing libraries were prepared using the Nextera XT kit and sequenced on a MiSeq (Illumina) using v3 reagents with 2 × 300 cycles ...
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bioRxiv - Microbiology 2021Quote: ... China with HiSeq 3000/4000 PE Cluster kit and HiSeq 3000/4000 SBS kit (Illumina Inc., San Diego, CA, USA) according to the manufacturer’s protocol.
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bioRxiv - Microbiology 2021Quote: Norovirus libraries were constructed using the NexteraXT DNA Library Preparation Kit and Nextera XT Index Kit v2 according to the manufacturer’s instructions (Illumina Inc.). Paired-end Illumina sequencing was performed on a MiSeq instrument (v3 chemistry ...
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bioRxiv - Immunology 2020Quote: ... 1 ng of cDNA was used to prepare a standard Nextera XT sequencing library (Nextera XT DNA sample preparation kit and index kit, Illumina). Samples were sequenced using HiSeq2500 (Illumina ...
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bioRxiv - Immunology 2020Quote: ... 1 ng of cDNA was used to prepare a standard NextEra XT sequencing library (NextEra XT DNA library prep kit and index kits; Illumina). Barcoded Illumina sequencing libraries (NextEra ...
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bioRxiv - Immunology 2021Quote: ... 1 ng of cDNA was used to prepare a standard Nextera XT sequencing library (Nextera XT DNA sample preparation kit and index kit, Illumina). Whole-transcriptome amplification and sequencing library preparations were performed in a 96-well format to reduce assay-to-assay variability ...
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bioRxiv - Immunology 2020Quote: ... The transposed DNA was amplified by PCR for 10-12 cycles by using the Nextera DNA Library Preparation Kit and Nextera XT Indexing Kit (Illumina). The library DNA within the 150-to 500-bp range was enriched by AMPure XP beads (Beckman Coulter) ...
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bioRxiv - Microbiology 2021Quote: ... rRNA was removed using Ribo-Zero rRNA Removal Kit (Human/Mouse/Rat) and Ribo-Zero rRNA Removal Kit (Bacteria) (Illumina). In order to reduce the impact of the host transcriptome on subsequent analysis ...
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bioRxiv - Genomics 2021Quote: ... The final libraries were then pooled together (15-20 at a time) and sequenced using the NextSeq 500/550 kit High Output Kit v2.5 (Illumina 20024906). The Illumina output files were converted to fastq format using bcl2fastq (v2.20.0.422 ...
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bioRxiv - Genomics 2021Quote: ... The library was prepared using the Chromium Genome Library Kit & Gel Bead Kit and sequenced (2 x 150 bp paired-end) on the NovaSeq 6000 (Illumina NovaSeq 6000 Sequencing System ...
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bioRxiv - Plant Biology 2023Quote: ... cDNA libraries were constructed from 1 μg/sample of total RNA using library preparation kits (NEBNext Ultra II RNA Library Prep Kit for Illumina 7770L ...
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bioRxiv - Genomics 2022Quote: 80 to 500 ng total RNA was used as input for rRNA depletion using either Illumina’s Ribo-Zero Gold rRNA Removal Epidemiology kit (discontinued) or Illumina’s Ribo-Zero Plus rRNA depletion kit (Illumina, cat# 20037135). For Ribo-Zero Plus depletion reactions ...
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bioRxiv - Microbiology 2023Quote: ... Ribosomal RNA was depleted using the Ribo Zero kit and samples were converted into Illumina sequencing libraries using the ScriptSeq v2 RNA-Seq Library Preparation Kit (Epicentre, Illumina). Libraries were sequenced using Illumina HiSeq (2 × 150 bp reads) ...
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bioRxiv - Microbiology 2023Quote: ... Paired-end sequencing of the pooled libraries was performed with an Illumina MiniSeq Mid Output reagent kit and an Illumina NextSeq 500/550 High Output Kit v2.5 (Illumina, USA), configured to 2 × 150-bp cycles ...
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bioRxiv - Molecular Biology 2023Quote: ... using a TruSeqTM Stranded Total RNA Library Prep Kit with a Ribo-ZeroTM kit and NovaSeq6000 paired-end sequencing (Illumina). The sequencing reads were aggregated into an rRNA reference (Mouse_rRNA_Reference_BK000964 ...
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bioRxiv - Animal Behavior and Cognition 2023Quote: ... The libraries were sequenced after onboard cluster generation using HiSeq Rapid SBS Kit v2 (200 cycles) and HiSeq PE Rapid Cluster Kit v2 (Illumina) on a HiSeq 1500 (Illumina) ...
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bioRxiv - Physiology 2023Quote: ... using a TruSeqTM Stranded Total RNA Library Prep Kit with a Ribo-ZeroTM kit and NovaSeq6000 paired-end sequencing (Illumina). The sequencing reads were aggregated into an rRNA reference (Mouse_rRNA_Reference_BK000964 ...
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bioRxiv - Molecular Biology 2022Quote: Total RNA libraries were prepared using the TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Human/Mouse/Rat Kit (REF. RS-122-2201/2202, Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2023Quote: ... We prepared libraries with the Nextera XT DNA Library Preparation Kit and 96-Sample Index Kit (Illumina, San Diego, CA) and quantified them using Qubit (ThermoFisher Scientific ...
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bioRxiv - Animal Behavior and Cognition 2024Quote: ... Ligation with Ribo-Zero Plus kit and the IDT ILMN RNA UDI B Lig 96 Idx 96 Spl index kit (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Microbiology 2024Quote: ... mRN A purification and fragmentation and the preparation of cDNA libraries were conducted using TruSeq RNA Library Prep Kit v2 kit (Illumina). The cDNA libraries were sequenced by Illumina HiSeq-2000 ...
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bioRxiv - Molecular Biology 2024Quote: ... Approximately 5 µg of polyA+ RNAs were used for further rRNA removal using the Ribo-Zero kit from the TruSeq Stranded Total RNA LT Kit (Illumina). Subsequently ...
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bioRxiv - Microbiology 2024Quote: ... Total RNA was subjected to rRNA depletion to ensure ncRNA and mRNA capture using the RiboCop rRNA Depletion Kit (Lexogen) prior to strand-specific RNA-seq library preparation using the TruSeq Stranded RNA LT Kit (Illumina) with the KAPA HiFi polymerase (Kapa Biosystems ...
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bioRxiv - Molecular Biology 2024Quote: ... RNA was extracted with a Direct-zol RNA MicroPrep Kit and subjected to RNA-Seq library preparation using a Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina) followed by a TruSeq Stranded Total RNA Kit (Illumina).
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bioRxiv - Microbiology 2024Quote: ... to include ssDNA viruses) using GenomiPhi V3 DNA amplification kit (Cytiva) and sequencing library preparation using the Nextera XT kit (Illumina) was performed at previously described [43] ...
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bioRxiv - Microbiology 2023Quote: ... DNA was prepared for whole-genome sequencing using the Nextera Flex Library Prep Kit (now, the Illumina DNA Prep Kit) according to manufacturer’s instructions ...
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bioRxiv - Genetics 2023Quote: ... Paired-end libraries with insert sizes ranging from 300 to 500 bp were generated using the NEXTflex PCR-Free DNA Sequencing Kit (Biooscientific) or the TruSeq Nano DNA Library Prep Kit (Illumina). Libraries were quantified using the KAPA Library Quantification Kit (Cliniscience) ...
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bioRxiv - Genetics 2022Quote: ... poly-A RNA libraries were generated using (NEBNext Ultra Directional RNA Library Prep kit, New England Biolabs, Ipswich, MA and the TruSeq SR Cluster kit v3 Illumina). Transcriptomes were generated on the Illumina NextSeq 550 platform with ∼25 million reads per sample with a single end read length between 85-101bp ...
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bioRxiv - Cancer Biology 2022Quote: ... HiSeq PE Rapid Cluster Kit v2 (PE-402-4002, Ilumina) and HiSeq Rapid SBS Kit v2 (200 cycles) (FC-402-4021, Illumina). Sequencing was performed on the MiSeq and HiSeq2500 Illumina sequencing platforms ...
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bioRxiv - Bioengineering 2022Quote: ... Sequencing reagents including the Nextera Index Kit (#15055290) and 150-cycle MiSeq Reagent Kit v3 (#MS-102-3001) were ordered from Illumina. Library sequencing preparation was performed using the GoTaq Master Mix from Promega (#M7433) ...
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bioRxiv - Microbiology 2022Quote: ... Libraries were prepared using the Nextera XT DNA sample preparation kit or the Nextera DNA Flex Library prep kit (both Illumina) and sequenced on a MiSeq platform with 300-bp paired-end reads ...