Labshake search
Citations for Sciex :
51 - 100 of 120 citations for Recombinant Human CD22 protein His tagged R PE labeled since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Microbiology 2020Quote: ... samples were labeled at room temperature for 2 h with a half unit of iTRAQ Reagent Multi-plex kit (AB SCIEX, Foster City, CA, USA). Finally ...
-
bioRxiv - Molecular Biology 2020Quote: ... digested proteins were analyzed on a TT5600 mass spectrometer (SCIEX) coupled to an Eksigent Ultra2D-plus nanoHPLC ...
-
bioRxiv - Neuroscience 2021Quote: ... Protein identification was carried out using ProteinPilot software v5.0 (SCIEX) with Paragon database search algorithm ...
-
bioRxiv - Plant Biology 2020Quote: The proteins were identified using the software ProteinPilot v5.0.1 (Sciex) with the method Paragon ...
-
bioRxiv - Synthetic Biology 2019Quote: ... Protein identification was undertaken using ProteinPilot™ 5.0 software (SCIEX) with searches conducted against the E ...
-
bioRxiv - Microbiology 2024Quote: Plasma proteins were characterized using a TripleTOF 6600 system (Sciex) via liquid chromatography-mass spectrometry (LC-MS ...
-
bioRxiv - Immunology 2020Quote: ... Acquired data was searched against the human proteome (Uniprot/Swissprot v2012_7) using ProteinPilot™ (v5; SCIEX) using following parameters ...
-
bioRxiv - Cell Biology 2020Quote: ... Protein identification was carried out using ProteinPilot™ software v5.0 (SCIEX) with Paragon™ database search algorithm ...
-
bioRxiv - Biophysics 2021Quote: The peptides were identified out using Protein Pilot (version 2.0.1, Sciex) using Pro-Group and Paragon algorithms against the RefSeq protein database of E ...
-
bioRxiv - Microbiology 2021Quote: ... The abundance of proteins was measured automatically using PeakView (AB SCIEX) with standard settings ...
-
bioRxiv - Microbiology 2022Quote: ... the DDA files were searched using Protein Pilot v4.2 (AB Sciex) and Mascot v2.4 (Matrix Science ...
-
bioRxiv - Microbiology 2022Quote: ... The abundance of proteins was measured automatically using PeakView (AB Sciex) with standard settings ...
-
bioRxiv - Neuroscience 2020Quote: ... Proteins present in the supernatant were quantified following iTRAQ labeling (AB ScieX) essentially following the manufacturer’s instructions ...
-
bioRxiv - Genomics 2019Quote: ... antarctica genome (Kelley et al., 2014) using the Protein Pilot program (Sciex). Gel proteins were compared to those with differential expression in specific tissues from our RNA-seq studies ...
-
bioRxiv - Biochemistry 2021Quote: ... The abundance of peptides and proteins were determined using PeakView 2.1 (SCIEX) as previously described [31,35,37] ...
-
bioRxiv - Microbiology 2022Quote: ... protein isoforms and their modifications with ProteinPilot 4.5 Beta (AB Sciex, USA). Identification was done by using the UniProtKB based reference library of resistant strain A ...
-
bioRxiv - Molecular Biology 2023Quote: ... Protein identification was then performed by the ProteinPilot software v.5.0 (Sciex). From each MS2 spectrum ...
-
bioRxiv - Microbiology 2023Quote: ... Further data analysis was performed using the ProteinPilot Protein Alignment Template (SCIEX) (https://sciex.com/software-support/software-downloads).
-
bioRxiv - Microbiology 2024Quote: ... The abundance of peptides and proteins were determined using PeakView 2.1 (SCIEX) as previously described 50,51 ...
-
bioRxiv - Cell Biology 2019Quote: ... Protein peak areas were exported to Markerview (AB Sciex, Foster City, CA, USA) for further processing ...
-
bioRxiv - Neuroscience 2020Quote: The mass spectrometry files were searched using Protein Pilot (AB SCIEX, Concord, Canada) and Mascot (Matrix Science Inc. ...
-
bioRxiv - Neuroscience 2020Quote: ... Samples were input in the Protein Pilot software v4.2 (AB SCIEX, Concord, Canada), which employs the Paragon algorithm ...
-
bioRxiv - Biochemistry 2020Quote: ... DDA protein identification was performed on a SCIEX TripleTOF 6600 (SCIEX, Framingham, MA) coupled to an Eksigent Ultra nanoLC system (Eksigent Technologies ...
-
bioRxiv - Neuroscience 2022Quote: ... Representative peptides spectrum against each sample was identified using Protein Pilot (AB Sciex) and corresponding UBA52 interacting proteins were predicted using MASCOT and NCBInr database.
-
bioRxiv - Microbiology 2022Quote: All raw files (.wiff) were searched in protein Pilot software (version 4.5; Sciex) with Mascot algorithm for protein identification and semi quantitation against Swiss-Prot_57.15 database (20,266 sequences after application of Homo sapiens taxonomy filter) ...
-
bioRxiv - Genomics 2021Quote: ... the proteins were subjected to mass spectrometry analysis with a TripleTOF 6600 system (Sciex).
-
bioRxiv - Genomics 2020Quote: Mass spectral data were analysed using Protein Pilot 4.5 Beta Software (July 2012; Sciex). MS/MS spectra were searched against the genomic proteins and the 6-frame translated data set constructed from the genomic assembly scaffolds using EMBOSS ...
-
bioRxiv - Microbiology 2020Quote: ... Data files were submitted for simultaneous searches using Protein Pilot version 5.0 software (Sciex) utilizing the Paragon and Progroup algorithms and the integrated false discovery rate (FDR ...
-
bioRxiv - Biochemistry 2022Quote: Data files were submitted for simultaneous searches using Protein Pilot version 5.0 software (Sciex) utilizing the Paragon and Progroup algortihms and the integrated false discovery rate (FDR ...
-
bioRxiv - Neuroscience 2021Quote: ... Analysis of differentially expressed proteins was performed using the OneOmics cloud processing online platform (SCIEX) as described in the Appendix Extended methods.
-
bioRxiv - Molecular Biology 2022Quote: Database searching: MGF peak list files were created using Protein Pilot version 4.5 software (Sciex) for the data obtained with the 5600+ triple TOF and with Proteome Discoverer 2.3 software (Thermo ...
-
bioRxiv - Biochemistry 2022Quote: Peptide and protein identification and quantification was performed with the ProteinPilot 4.5 software (AB SCIEX) using the Paragon database search algorithm ...
-
bioRxiv - Microbiology 2020Quote: The resulting Protein-Pilot group file was used by PeakView® (version 2.1, AB SCIEX) to quantify proteins ...
-
bioRxiv - Pathology 2020Quote: ... Protein database searching was performed against a reference Human Uniprot FASTA database (03-10-2018) by ProteinPilot™ Software 5.0 (SCIEX; Framingham, MA, USA) using a Paragon™ algorithm ...
-
bioRxiv - Biochemistry 2021Quote: All intact protein and peptide analysis were carried out on a TripleTOF 5600 mass spectrometer (Sciex) operated with the turbo V DuoSpray ion source linked to an Ultimate 3000 RSLCnano system loading pump (Dionex ...
-
bioRxiv - Cancer Biology 2021Quote: ... proteins were identified by LC-MS/MS analysis using Eksigent nanoLC (AB SCIEX, Framingham, MA, USA) coupled to LTQ Orbitrap Velos Pro mass spectrometer (Thermo Fisher Scientific ...
-
bioRxiv - Plant Biology 2021Quote: ... the processed mrkw files containing protein information from PeakView were loaded into MarkerView (Version 1.2.1.1, AB Sciex) for normalization of protein intensity (total area sums ...
-
bioRxiv - Cell Biology 2021Quote: Mass spectrometric data was searched using the database search engine Protein Pilot [23] (SCIEX 5.0, revision 4769) with the Paragon algorithm (5.0.0.0.4767) ...
-
bioRxiv - Immunology 2019Quote: ... raw files obtained by DDA analysis of eight secreted protein samples were searched using ProteinPilot software (SCIEX), and search results were then imported into Spectronaut software (Biognosys ...
-
bioRxiv - Microbiology 2023Quote: The digested proteins from each gel spot were analyzed using the NanoLC Ultra® 2Dplus System (SCIEX) combined with the cHiPLC® system in Trap-Elute mode ...
-
bioRxiv - Physiology 2024Quote: ... The proteins were identified by MALDI TOF/TOF mass spectrometry (AB SCIEX TOF/TOF™ 5800 System) using Swiss-Prot database.
-
bioRxiv - Biochemistry 2021Quote: ... The obtained protein peak areas were exported to Markerview™ version 1.3 (AB Sciex, Foster City, CA, USA) for further data refinement ...
-
bioRxiv - Microbiology 2022Quote: ... protein mass fingerprints were obtained using a 5800 MALDI-TOF/TOF mass spectrometer (AB Sciex, Framingham, MA, USA), with detection in the linear middle mass in the range from 5000 to 20 000 Da ...
-
bioRxiv - Physiology 2020Quote: ... Here the raw data was searched against the mouse Swissprot database (release October 2017) using the paragon algorithm on Protein-Pilot (Version 5.0.1, AB SCIEX). A total of 33847 proteins were searched ...
-
bioRxiv - Molecular Biology 2023Quote: ... only proteins identified with a confidence score (FDR<0.01) and a total protein score >1.0 were retained according to the analysis with ProteinPilot (Sciex). For each protein of interest ...
-
bioRxiv - Molecular Biology 2021Quote: ... Samples were analyzed by nanoLC-MS/MS on a Sciex 5600 quadrupole-TOF system and identified using mus musculus or the homo sapien databases with the Protein Pilot (ver 5.0, rev 4769) program (Sciex) as described previously42.
-
bioRxiv - Biochemistry 2019Quote: The raw files in the format of “.wiff” containing the spectra of MS and MS/MS were submitted to Protein Pilot v4.0 software (AB Sciex) for protein identification and relative quantification ...
-
bioRxiv - Biochemistry 2022Quote: ... Confidence of quantitation for differentially expressed proteins was analyzed with the ProteinPilot Descriptive Statistics Template (PDST) (beta v3.07p, AB SCIEX). Gene ontology (GO ...
-
bioRxiv - Biochemistry 2019Quote: ... The results from ProteinPilot were used as an ion library to measure the abundance of peptides and proteins using PeakView 2.1 (SCIEX), with settings ...
-
bioRxiv - Systems Biology 2020Quote: ... Tryptic peptides were generated from 8 µg of undepleted plasma proteins and separated on a NanoLC 425 System (SCIEX). 5 µl/min flow was used with trap-elute setting using a ChromXP C18 trap column 0.5 x 10 mm ...