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Citations for Qiagen :
1 - 42 of 42 citations for p p' DDE since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2021Quote: Total RNA was extracted from the anthers of P and ‘CMS[P]’ with an RNeasy Plant Mini Kit (QIAGEN, Hilden, Germany). RNA was treated with RNase-free DNase (QIAGEN ...
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bioRxiv - Cell Biology 2019Quote: ... p-values of overlap were determined by IPA software (Qiagen) using Fisher’s exact test ...
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bioRxiv - Microbiology 2020Quote: ... ICAM and P-Selectin were from the QuantiTect primer assay kit (Qiagen). Results are expressed following normalization using 18S RNA.
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bioRxiv - Cell Biology 2021Quote: ... Differentially expressed genes (P<0.01) were analysed with Ingenuity Pathway Analysis software (Qiagen) applying the Upstream Regulator Analysis approach ...
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bioRxiv - Neuroscience 2022Quote: ... The P values for DEGs were then uploaded to Ingenuity Pathway Analysis (Qiagen), which was used to analyze the cellular pathways determined by the differentially expressed genes.
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bioRxiv - Genetics 2021Quote: ... DNA was extracted using Qiagen 96-well DNeasy kits (Qiagen P/N 69581). Sequencing libraries were prepared using the Illumina Nextera Kit and custom barcoded adapter sequences ...
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bioRxiv - Immunology 2022Quote: ... and adjusted P-value were used to input into IPA (version 43605602; QIAGEN). Initial interrogation of each dataset was performed using default values and parameters set on IPA ...
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bioRxiv - Genomics 2022Quote: ... pallidum and human RNase P gene (RNP) using a Rotor-Gene 6000 instrument (Qiagen) as previously described with modifications (11 ...
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bioRxiv - Neuroscience 2021Quote: ... adjusted p-value <0.05) were used to determine canonical pathway enrichment (Ingenuity Pathway Analysis, Qiagen).
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bioRxiv - Plant Biology 2022Quote: Total RNA was extracted from common bean (P. vulgaris) leaves using RNeasy Plus Mini Kit (Qiagen). After DNase I (ThermoFisher Scientific ...
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bioRxiv - Cell Biology 2023Quote: ... steady state P-SSCs and graft BM-MSCs was extracted using the RNAeasy Plus Micro kit (Qiagen) and assessed for integrity and purity using an Agilent Bioanalyzer ...
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bioRxiv - Systems Biology 2023Quote: Differentially expressed genes (p-value < 0.05) were overlaid onto canonical pathways using Ingenuity Pathway Analysis (IPA; QIAGEN) Knowledge Base ...
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bioRxiv - Cancer Biology 2021Quote: Total RNA was isolated from M249-P and M249-VSR cells by using RNeasy Plus Mini Kit (Qiagen). Samples were sequenced on HiSeq3000 (Illumina ...
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bioRxiv - Cancer Biology 2021Quote: Genomic DNA of M249-P and M249-VSR cells were isolated by using DNeasy Blood & Tissue Kits (Qiagen). Samples were run on Agilent 6×80K array ...
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bioRxiv - Cancer Biology 2020Quote: ... S10A: Total RNA was isolated from ccRCC cells (786-O and 769-P) using RNeasy Mini Kit (Qiagen), followed by first-strand cDNA synthesis from 2 to 2.5 μg of RNA using SuperScript VILO (Invitrogen) ...
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bioRxiv - Cell Biology 2021Quote: Differentially expressed genes (DEG; fold change > 1.6 and P < 0.05) were subjected to Ingenuity Pathway Analysis (IPA, Qiagen) for the analysis of biological function and upstream regulators ...
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bioRxiv - Cancer Biology 2021Quote: ... genes that were differentially expressed (fold-change over ±1.3 and p-value < 0.05) were used for the Ingenuity Pathway Analysis (Ingenuity Systems, Qiagen Bioinformatics ...
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bioRxiv - Molecular Biology 2020Quote: ... selected by p value and/or fold change (FC) as indicated were uploaded into the IPA software (Qiagen). The Core Analyses function included in the software was used to interpret the data for top canonical pathways.
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bioRxiv - Molecular Biology 2020Quote: ... Genes with a p-value < 0.05 were determined to be differentially expressed (Fold change >1.5) and the Ingenuity Pathway Analysis (Qiagen) was used for pathway and transcription factor analysis.
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bioRxiv - Neuroscience 2021Quote: Approximately 2 × 106 undifferentiated MØP cells or M-CSF differentiated MØP cells were lysed in accordance with the Qiagen RNeasy Mini kit (Qiagen). The concentration of RNA was measured using either a Nanodrop™ 2000 (Thermofisher Scientific ...
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bioRxiv - Cell Biology 2021Quote: ... The differential genes at an adjusted p value cut-off of 0.05 (Wilcoxon test) provided with p-value and fold change were imported into IPA (QIAGEN Inc. ...
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bioRxiv - Pharmacology and Toxicology 2022Quote: ... Upregulated gene markers per cluster with logFC>0.4 and adjusted p-value <0.05 were subjected to functional enrichment with Ingenuity Pathway Analysis (IPA) (Qiagen Inc.). IPA canonical pathways and upstream transcriptional regulators were predicted per cluster and then integrated via the Comparison Analysis function.
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bioRxiv - Genomics 2023Quote: ... Obtained lists with significantly changed genes (p<0.05, fold-change ≥2) were used in Ingenuity Pathway Analysis (IPA, Qiagen).
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bioRxiv - Cancer Biology 2021Quote: ... Gene set enrichment analysis overlap and activity z-scores p values have been calculated using the Ingenuity Pathway Analysis Software (Qiagen) using the previously described method (76) ...
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bioRxiv - Molecular Biology 2021Quote: ... Significant probes were defined as p < 0.01 and resultant gene sets were uploaded to Ingenuity Pathway Analysis (IPA; Qiagen, Inc.) for probe set annotations and to query relationships between genes ...
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bioRxiv - Evolutionary Biology 2022Quote: ... 5µM of CONIPHY designed reverse and forward primers (P. viticola PyroID kit, CONIPHY, France) using PyroMark Assay Design version 2.0 (Qiagen, France). Target region of cytb gene with the insertion of nucleotides was amplified using the following program ...
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bioRxiv - Immunology 2020Quote: ... 50 mM Tris-HCl pH 8.0) with 0.1 μL Protease Inhibitor Cocktail VI (Astral Scientific No. P-1515) using the TissueLyser II (Qiagen No. 85300) at 25 Hz for 2 min twice ...
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bioRxiv - Neuroscience 2020Quote: ... upregulated genes with adjusted p-value of < 0.05 from each cluster were imported into Ingenuity Pathway Analysis (IPA) (QIAGEN Inc.). IPA Canonical Pathways Analysis was performed to visualize the activity of individual pathways ...
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bioRxiv - Immunology 2021Quote: ... 1mL of whole blood was drawn from the antecubital area of the arm and seeded directly into each QuantiFERON-TB Gold Plus (QFT-P, Qiagen) tube and incubated for 24 hours ...
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bioRxiv - Neuroscience 2022Quote: ... Pathway analysis was performed for genes 2-fold up- or down-regulated with p-value < 0.05 using Ingenuity Pathway Analysis (IPA) software (Qiagen, USA).
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bioRxiv - Microbiology 2022Quote: ... and whole lung tissues were harvested and homogenized in DMEM supplemented with 10% FBS and P/S with TissueRuptor (Qiagen). Virus in the supernatant of lung homogenate was intranasally injected into another BALB/c mice ...
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bioRxiv - Cell Biology 2023Quote: ... significantly regulated human proteins (t-test, p-value ≤ 0.01; described above) were characterized by core analysis in IPA® software (version 68752261, QIAGEN Inc. ...
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bioRxiv - Microbiology 2021Quote: ... These cells were incubated overnight in MEM-α media free of FBS and supplemented with 1% P/S followed by collection of Supernatant (conditioned media) and total RNA extraction (Cat# 74134, Qiagen, Germany). The resulting samples were stored at −80°C until analyzed further in downstream applications.
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bioRxiv - Genomics 2021Quote: ... or museum specimens deposited at the Paris (P) herbarium (11 extractions) using the CTAB protocol (Doyle and Doyle, 1987) or the DNeasy® Plant Mini Kit (Qiagen). We quantified DNA using the QuantiFluor® dsDNA system for a QuantusTM fluorometer (Promega ...
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bioRxiv - Neuroscience 2023Quote: ... Genes with fold change >= 2 and adjusted p-value <0.05 were selected as DEGs and submitted to the Ingenuity Pathway Analysis (IPA) software (QIAGEN, CA, USA). The IPA graphical summary gives an overview of the main biological findings of the analysis.
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bioRxiv - Cell Biology 2023Quote: ... Differential gene lists were created with ≥ 2 fold expression cutoff and significant p-values of < 0.05 were submitted to pathway analysis using Ingenuity Pathway Analysis (Qiagen, Germantown, MD) to identify pathways of interest that were modified by treatment with PAPA-NONOate.
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bioRxiv - Microbiology 2021Quote: ... 68°C for 60 s and a final extension cycle of 68°C for 7 min. Amplified PCR products (approx. 429 bp for P gene) were gel purified using QIAquick gel extraction kit (QIAGEN, Hilden, Germany) and sequenced using BigDye Terminator v3.1 Cycling Sequencing Kit (Applied Biosystems ...
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bioRxiv - Immunology 2021Quote: ... expression fold changes and p-values generated from differential expression analyses were imported into Ingenuity Pathway Analysis software (IPA, Qiagen, RRID: SCR_008653). Core expression analysis was performed which generated canonical pathways which were upregulated or downregulated based on these data ...
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bioRxiv - Evolutionary Biology 2022Quote: ... was extracted from the blood (N. scutatus) or tail clip (P. textilis) using the genomic-tip 100/G kit (Qiagen, Hilden, Germany). This was performed with proteinase K (NEB ...
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bioRxiv - Genomics 2020Quote: ... Realtime-qPCR was performed on 11 differentially expressed (DE) miRNAs based on miRNA-seq results (|FC| ≥ 2, P < 0.05) using miScript SYBR Green PCR Kit (Qiagen 218073, California, USA) according to the manufacturer’s instructions with StepOne Applied Biosystems real-time PCR machine (Applied Biosystems ...
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bioRxiv - Neuroscience 2023Quote: ... The final data set (including the fold ratio change of each group compared to healthy and p-values) was further analysed in the Ingenuity Pathway Analysis software (IPA®, Qiagen, UK), where canonical pathways and upstream regulator data were compared by their activation z-score and associated p-value ...
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bioRxiv - Genetics 2024Quote: The organs of Corti of postnatal day (P)4 mice were dissected and stored at -20°C in RNAprotect Tissue Reagent (RNAlater®) (QIAGEN, cat. no. 76106). Total RNA was extracted using the SPLIT RNA extraction kit (Lexogen ...