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Citations for PacBio :
1 - 35 of 35 citations for Human Immunodeficiency Virus Nef Protein HIV 1 Clade B IIIB since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2020Quote: ... (b) All SVs detected by PacBio CCS Reads and supported by either PacBio CLR or ONT were retained ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and barcoded using barcoded overhang adapters 8A/B (PacBio) and nuclease treated with SMRTbell enzyme cleanup kit 1.0 (PacBio) ...
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bioRxiv - Microbiology 2021Quote: The mCherry-E3L integration sites in the purified HGT virus genomes were located by inverse PCR amplification and by PacBio sequencing ...
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bioRxiv - Genomics 2023Quote: ... in human and from 2.5 (cDNA-PacBio) to 1.38 (dRNA-ONT) ...
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bioRxiv - Neuroscience 2020Quote: ... gRNA was combined with Cas9 protein (PacBio) and injected into one-cell stage embryos ...
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bioRxiv - Microbiology 2020Quote: ... the number of intervening days between serial isolations, time point (A or B, being earlier and later time points respectively) and sequencing technology (Illumina [I] or PacBio[P]) (Figure 3B) ...
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bioRxiv - Molecular Biology 2023Quote: ... trimmed reads were mapped against the human reference genome GRCh38.p14 (GCA_000001405.29, February 2022) using Minimap2 (Version 2.24) (Li 2018) (PacBio/Oxford Nanopore read to reference mapping ...
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bioRxiv - Genomics 2020Quote: ... non-unique-PacBio+Uniprot (peptides mapped to both PacBio and Uniprot proteins), and multigene (peptides mapped to multiple genes).
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bioRxiv - Genomics 2023Quote: ... we relied on a combination of protein and transcript evidence constructed from PacBio Iso-Seq and bulk Illumina RNA-seq for our focal species as well as related species in the tribe Sileneae ...
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bioRxiv - Microbiology 2022Quote: The taxonomic composition of bacterial communities in the post-mortem human brain tissues were analyzed using the Pacific Biosciences (PacBio) single molecule real-time (SMRT ...
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bioRxiv - Cancer Biology 2024Quote: ... Raw sequencing data was aligned to the GRCh38/hg38 build of the human reference genome using pbmm2 as part of SMRTLink (PacBio) v 13 and structural variants were detected using pbsv ...
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Evolutionary conserved aspects of animal nutrient uptake and transport in sea anemone vitellogenesisbioRxiv - Evolutionary Biology 2022Quote: The Cas9-mediated knock-in injection was performed by modifying previously described protocols for CRISPR/Cas9-mediate mutagenesis and used 0,75μg/μl nls-Cas9 protein (PacBio), 75ng/μl of each guide RNA ...
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bioRxiv - Developmental Biology 2023Quote: The Cas9-mediated knock-in injection was performed by modifying previously described protocols for CRISPR/Cas9-mediated mutagenesis and used 0,75μg/μl nls-Cas9 protein (PacBio), 75ng/μl of each guide RNA ...
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bioRxiv - Genomics 2024Quote: ... Four generations of full-sib matings were carried out to produce the genomic strain SaPa_ori_Rep25-2-1-1 (“Sapa_PacBio”). Fly strains were maintained at room temperature on standard cornmeal food provided by the UC Davis Fly Kitchen with filter paper for environment structure and pupariation substrate.
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bioRxiv - Immunology 2022Quote: ... 16-nucleotide barcodes were associated with their BA.1 variants by PacBio sequencing ...
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bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G), 20 µL KOD Hot Start Master Mix ...
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bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 3’ PacBio round 2 reverse primer (PacBio_3pri_RND2), and 25 µL KOD Hot Start Master Mix ...
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bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 5’ nucleotide tagging primer (PacBio_5pri_G or PacBio_5pri_C), 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G) ...
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bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G), 20 µL KOD Hot Start Master Mix ...
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bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 5’ PacBio round 2 forward primer (PacBio_5pri_RND2), 1 µL of 10 µM 3’ PacBio round 2 reverse primer (PacBio_3pri_RND2) ...
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bioRxiv - Immunology 2023Quote: ... 1 µL of 10 µM 5’ nucleotide tagging primer (PacBio_5pri_G or PacBio_5pri_C), 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G) ...
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bioRxiv - Microbiology 2024Quote: ... 1 µL of 10 µM 5’ nucleotide tagging primer (PacBio_5pri_G or PacBio_5pri_C), 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G) ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Each pool was sequenced on 1-2 Sequel II SMRTcells 8M (PacBio) on the Sequel IIe instrument ...
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bioRxiv - Microbiology 2024Quote: ... 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G), 20 µL KOD Hot Start Master Mix ...
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bioRxiv - Microbiology 2024Quote: ... 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G), 20 µL KOD Hot Start Master Mix ...
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bioRxiv - Microbiology 2024Quote: ... 1 µL of 10 µM 5’ nucleotide tagging primer (PacBio_5pri_G or PacBio_5pri_C), 1 µL of 10 µM 3’ nucleotide tagging primer (PacBio_3pri_C or PacBio_3pri_G) ...
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bioRxiv - Microbiology 2020Quote: ... aeruginosa isolates were extracted and sequenced by Illumina HiSeq X platform and genome of Isolate 1(Iso1) was sequenced by PacBio Sequel II platform ...
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bioRxiv - Genetics 2020Quote: ... demultiplexed circular consensus (CCS) reads were generated with the RS_ReadsOfInsert.1 protocol from PacBio’s SMRT portal (v2.3.0 ...
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bioRxiv - Genomics 2020Quote: We generated circular consensus reads by ccs tool with “--noPolish --minPasses 1” options from PacBio SMRT link tools v.5.1.0 (https://www.pacb.com/support/software-downloads/ ...
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bioRxiv - Microbiology 2020Quote: Raw data were processed using the protocol RS_Readsofinsert.1 in SMRT Portal version 2.7 software (PacBio). Low-quality sequences were removed using the Quantitative Insights Into Microbial Ecology (QIIME ...
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bioRxiv - Genomics 2022Quote: ... saligna CGN05327 (Supplemental Figure 1) was assembled using a ∼21-fold coverage of long-read data generated by PacBio Sequel technology (4,083,751 reads ...
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bioRxiv - Molecular Biology 2023Quote: High molecular weight DNA was extracted from frozen pellets (1 million cells) using the Nanobind HMW DNA Extraction kit (PacBio) following the manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2024Quote: ... We thus validated our haplotype block analysis by estimating the correspondence between our allele frequency-based inferred haplotypes and (1) sequences from PacBio HiFi-based long read assemblies of the 12 PSGs in five diploid and five tetraploid samples of A ...
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bioRxiv - Genomics 2023Quote: Sequencing data were obtained using two complementary long-read sequencing technologies for the assembly of hTERT RPE-1 cells: Pacific Biosciences (PacBio) High-Fidelity (HiFi ...
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bioRxiv - Microbiology 2020Quote: ... k236-1 and k273) were sequenced using the PacBio platform (The Norwegian Sequencing Centre; PacBio RSII platform using P5-C3 chemistry).