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Citations for Oxford Instruments :
1 - 43 of 43 citations for 6 propan 2 yl 1 3 5 triazine 2 4 diamine since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Developmental Biology 2022Quote: The quantification of GFP::SYP-2 and mCherry::SYP-3 was performed using Imaris (Oxford Instruments) in combination with our whole gonad analysis ...
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bioRxiv - Bioengineering 2021Quote: ... and SMAD 2/3 and YAP expression was quantified using Imaris 9.7.0 3D-4D Imaging Software (Oxford Instruments, Abingdon, United Kingdom). Maximum intensity projections of the F-actin channel were prepared using ImageJ software (NIH ...
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bioRxiv - Synthetic Biology 2021Quote: ... The root-mean-square (r.m.s.) surface roughness of the biofilm over 2 μm × 2 μm areas was analyzed using built-in Cypher software (Oxford Instruments); these measurements were from the AFM height images of at least three biological replicates.
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bioRxiv - Molecular Biology 2021Quote: ... 6 or 7 of embryoid body culture (Extended Data Fig. 4) was done using Imaris (version 9.1.2, Oxford Instruments). Intensity of transcription spots were quantified using the ‘Spots’ tool calculated as the mean of pixels within an ovoid shape of 1 μm x 1 μm x 3 μm in size (x,y,z dimensions respectively) ...
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bioRxiv - Biophysics 2019Quote: ... Digital images were recorded with a slow scan CCD camera system (Proscan HSC 2 Oxford instruments, Abingdon, USA), and at a minimal under-focus of the microscope objective lens to provide sufficient phase contrast [31] ...
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PLETHORA-WOX5 interaction and subnuclear localisation control Arabidopsis root stem cell maintenancebioRxiv - Plant Biology 2021Quote: ... The visualisation and counting of nuclei with WOX5 expression (Fig. 2) was done with Imaris (version 9.1.2, Bitplane, Oxford Instruments plc). Box and scatter plots showing the number of expressing nuclei were created with Origin 2018b and 2020b (OriginLab Corporation) ...
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bioRxiv - Neuroscience 2024Quote: ... Secondary and tertiary apical dendrites located in the stratum radiatum and were 20 ±3 µm in length and 1.0 ±0.2 μm in diameter were then cropped and modeled using the semiautomated filament tracer tool in Imaris 10.0 (Oxford Instruments). The default setting of the Classify Spines X Tension tool in Imaris was subsequently used to classify spines as stubby ...
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bioRxiv - Bioengineering 2021Quote: ... The excess sample was then drained and washed 2 times with ultrapure water and was dried and imaged using MPF-3D BIO AFM (Asylum Research, Oxford Instruments) in tapping mode in air ...
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bioRxiv - Microbiology 2021Quote: ... Images were captured at 2 hr intervals for 44 hr using an ANDOR zyla 5.5 MP sCMOS camera (Oxford Instruments, UK).
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bioRxiv - Developmental Biology 2022Quote: 3D rendering of confocal stacks for Videos 1–3 was done using Imaris (Oxford Instruments, plc. Abingdon, UK) according to the following algorithm for batch processing ...
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bioRxiv - Neuroscience 2023Quote: ... Images of cross sections 1 cm below lesion to visualize vGlut1/2 together with GFP were acquired with Andor Dragonfly 503 spinning disc confocal microscope (Oxford Instruments, Abingdon, UK).
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bioRxiv - Neuroscience 2023Quote: ... 3-dimensional CT images were analyzed using Imaris 9.8 (Oxford Instruments). Kyphosis index was determined based on where the distance is calculated from a horizontal line drawn from the center of the C7 vertebrae to the center of the pelvis ...
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bioRxiv - Biophysics 2023Quote: ... and recorded with an iXon 3 Andor DU-897 EMCCD camera (Oxford instruments, UK).
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bioRxiv - Genetics 2022Quote: ... and an ITC-5 temperature controller (Oxford Instruments, Abingdon, United Kingdom). Spectra were acquired under slow-passage non-saturating conditions.
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NK cells orchestrate splenic cDC1 migration to potentiate antiviral protective CD8+ T cell responsesbioRxiv - Immunology 2020Quote: ... The 3-dimensional (3D) reconstruction and the video S1 were generated using the Imaris software (Oxford Instruments).
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bioRxiv - Cell Biology 2021Quote: To analyze co-localization of animals co-expressing TSP-6-wrmScarlet and GCY-22-mEGFP in ASER neuron we used Imaris software Version 9 (Oxford Instruments, Zurich, Switzerland). We first established a ROI containing the cilia and their base ...
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bioRxiv - Biophysics 2021Quote: 3D rendering of Airyscan images was generated with the 3/4D visualization and analysis software Imaris (Oxford Instruments).
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bioRxiv - Biophysics 2020Quote: 3D representations of Airyscan images were generated with the 3/4D visualization and analysis software Imaris (Oxford Instruments).
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bioRxiv - Molecular Biology 2023Quote: The IFITM3 signal of the deconvolved image stacks was segmented in 3 dimensions using the surface segmentation algorithm of Imaris (Verison 9.8.2, Oxford Instruments). The number of segmented objects per cell and the volume distribution of all objects were quantified.
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bioRxiv - Neuroscience 2023Quote: ... Puncta density was determined in muscle 4 using the “Spots” function in Imaris software (Oxford Instruments, Abingdon, UK), with a spot size of 0.4 for Brp puncta ...
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bioRxiv - Genomics 2023Quote: ... We analyzed four hippocampal sections per animal for each L1 TF 5ʹUTR probe (Extended Data Fig. 4) using Imaris 9.5.1 (Bitplane, Oxford Instruments). To render 3D visualizations for a given neuron ...
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bioRxiv - Neuroscience 2022Quote: MR images of 3 mice were acquired on a 9.4T Oxford 8.9-cm vertical bore magnet (Oxford Instruments, Abingdon, United Kingdom) with an Agilent VnmrJ 4.0 imaging console ...
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bioRxiv - Biophysics 2019Quote: ... and 640-nm laser lines (Andor 4-line laser launch) and Zyla 5.5 s-CMOS camera (Andor, Oxford Instruments). Images of global and local flows were acquired using 4X Plan Apo NA 0.2 dry objective and 40X Plan Apo LWD NA 1.5 water immersion objectives.
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bioRxiv - Neuroscience 2023Quote: ... Squares of approximately 1 × 1 × 1 mm were attached to aluminium pins (Gatan metal rivets, Oxford instruments) with very little amount of cyanacrylamide glue ...
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bioRxiv - Animal Behavior and Cognition 2024Quote: ... Squares of approximately 1 × 1 × 1 mm were attached to aluminium pins (Gatan metal rivets, Oxford instruments) with very little amount of cyanacrylate glue ...
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bioRxiv - Biophysics 2020Quote: ... purpose-built multifunctional apparatus [14] built around a 0.75 M Czerny-Turner spectrometer (Spex) and a superconducting magnet cryostat (Oxford Instruments SM-4). The system is able to simultaneously record absorption ...
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bioRxiv - Neuroscience 2021Quote: ... Fluorescence images were acquired at 5 full frames per second (50 ms acquisition time) by an iXon EMCCD camera (Oxford Instruments) mounted on an inverted microscope (ECLIPSE Ti2 ...
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bioRxiv - Neuroscience 2022Quote: ... by acquiring 5 μm deep (10 z-steps) stacks of multiple overlapping fields and stitching them together in Imaris Stitcher (Oxford Instruments). Stitched images were imported into Imaris (Oxford Instruments) ...
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C53 interacting with UFM1-protein ligase 1 regulates microtubule nucleation in response to ER stressbioRxiv - Cell Biology 2020Quote: ... Time-lapse sequences were collected in seven optical slices (0.1 μm steps) for 1 min at 1 s interval with the Andor Dragonfly 503 spinning disc confocal system (Oxford Instruments, Abingdon, UK) equipped with a stage top microscopy incubator (Okolab ...
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bioRxiv - Neuroscience 2023Quote: ... and images were taken every 5 seconds with a scientific complementary metal oxide semiconductor camera (scMOS) (Andor Zyla 4.2 PLUS, Oxford Instruments, Belfast, UK) configured to the fluorescent lamp (X-Cite 110 LED Illumination system ...
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bioRxiv - Neuroscience 2021Quote: ... A total of 5 cells per animal was then analysed using the Filament Tracer module of Imaris software (Bitplane, Oxford Instruments, version 9.3.1). The filament starting point was placed at the soma and the seed point threshold was adjusted to include all the ramifications ...
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bioRxiv - Developmental Biology 2023Quote: ... 1 was generated using ImarisViewer v10.0.1 (Oxford Instruments). Insets were generated by exporting surface .stl files from FIJI 3D viewer and rendering in Rhino 7 (Robert McNeel & Associates) ...
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bioRxiv - Biophysics 2023Quote: ... measurements were also performed to measure conduction along Ballona Marsh CB between the IDA microelectrodes and C-AFM tip (Si Probe ASYELEC.01-R2, Oxford Instruments, with a conductive Ti/Ir (5/20) coating and 28±10 nm tip radius ...
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bioRxiv - Immunology 2019Quote: ... 24μl [1-13C] pyruvate sample (pyruvic acid, 15mM OX63 trityl radical (Oxford Instruments), and 1.5mM Gad-DOTA ...
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bioRxiv - Cancer Biology 2023Quote: ... A 96 mmol/L hyperpolarized [1-13C] pyruvate solution from a Hypersense DNP Polarizer (Oxford Instruments) was administrated under anesthesia with 1.5% isoflurane via a tail vein cannula (12 mL/g body weight ...
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bioRxiv - Immunology 2019Quote: ... with 23mM OX63 trityl radical) were co-polarized for ~1 hour in a Hypersense polarizer (Oxford Instruments, 3.35T), and rapidly dissolved in 4.5ml heated buffer (80mM NaOH in Tris with EDTA ...
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bioRxiv - Biophysics 2023Quote: ... RR values between −0.5 and 1 were encoded using a custom color map and IMARIS (Oxford Instruments, UK) software was used to obtain volumetric visualizations.
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bioRxiv - Cancer Biology 2023Quote: ... 75 μL of 96 mmol/L hyperpolarized [1-13C] pyruvate solution from a Hypersense DNP Polarizer (Oxford Instruments) was injected in the NMR tube ...
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bioRxiv - Microbiology 2023Quote: ... Image segmentation and 3D rendering of HSV-1 virus particle undergoing exocytosis from Rab6a vesicle was done in Imaris (Oxford Instruments) by constructing spots and surfaces for the objects at respective image slices ...
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bioRxiv - Cell Biology 2024Quote: ... embryos were injected with the nanobody-coated beads and mRNA mix and incubated for a further 1 hour at 22°C prior to imaging on the Andor DragonFly 505 (Oxford Instruments) spinning disk system described below.
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Trimeric Photosystem I facilitates energy transfer from phycobilisomes in Synechocystis sp. PCC 6803bioRxiv - Biophysics 2022Quote: ... the suspension was placed in a 1 mm demountable cryogenic quartz cell and cooled in an optical cryostat (Optistat DN, Oxford Instruments, UK). The total instrument response (IRF ...
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bioRxiv - Neuroscience 2021Quote: ... The length and number of branch points of Pecam-1- or SMA-immunolabeled brain vessels were quantified using the “Surface” and “Filament” tools in Imaris software (Oxford instruments, Oxford). Anastomoses were measured by eye.
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bioRxiv - Biophysics 2023Quote: ... the suspension was placed in a 1 mm demountable cryogenic quartz cell and cooled in an optical cryostat (Optistat DN, Oxford Instruments, UK). The total instrument response (IRF ...