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Citations for Oxford Instruments :
1 - 28 of 28 citations for 6 Chloro 9 2 C methyl β D riboFuranosyl 9H purine since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cell Biology 2021Quote: To analyze co-localization of animals co-expressing TSP-6-wrmScarlet and GCY-22-mEGFP in ASER neuron we used Imaris software Version 9 (Oxford Instruments, Zurich, Switzerland). We first established a ROI containing the cilia and their base ...
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bioRxiv - Cell Biology 2021Quote: ... Images were then opened in Imaris 9 (Oxford Instruments) and used to do the following quantifications ...
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bioRxiv - Neuroscience 2023Quote: ... The aligned volumetric data was imported to Imaris 9 (Oxford Instruments) and the green autofluorescence that was acquired at 488/515 nm excitation/emission was used to manually delineate the lesioned area and render the total lesion volume ...
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bioRxiv - Physiology 2023Quote: ... The images were then processed with the Imaris software (Oxford Instruments, version 9) for segmentation and 3D visualization ...
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bioRxiv - Neuroscience 2023Quote: ... cropped and exported for presentation using ImageJ software (Fiji) or IMARIS 9 (Oxford Instruments). Reported expression patterns were reproducible across three or more biological replicates.
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bioRxiv - Microbiology 2019Quote: The mean area and number of VFs were calculated using the surface tool in Imaris 9 software (Bitplane, Oxford Instruments, UK), and an overlap coefficient ...
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bioRxiv - Bioengineering 2019Quote: ... Orientation of the microfluidics-aligned collagen bundles was characterized using the ImageJ plugin “OrientationJ”.33 The visualization and surface analysis software Imaris 9 (Oxford Instruments) was used to reconstruct confocal image stacks from which cell migration in 3D was automatically tracked and tumor volume was automatically computed ...
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bioRxiv - Cell Biology 2023Quote: ... To identify and quantify clusters and distances on the cilia 9-plex data set the individual Picasso reconstructed cilium datasets were loaded into Imaris (Oxford instruments, version 10.0) to generate surfaces that were used to mask the localization data for each target at the cilium ...
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bioRxiv - Synthetic Biology 2021Quote: ... The root-mean-square (r.m.s.) surface roughness of the biofilm over 2 μm × 2 μm areas was analyzed using built-in Cypher software (Oxford Instruments); these measurements were from the AFM height images of at least three biological replicates.
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bioRxiv - Molecular Biology 2021Quote: ... 6 or 7 of embryoid body culture (Extended Data Fig. 4) was done using Imaris (version 9.1.2, Oxford Instruments). Intensity of transcription spots were quantified using the ‘Spots’ tool calculated as the mean of pixels within an ovoid shape of 1 μm x 1 μm x 3 μm in size (x,y,z dimensions respectively) ...
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bioRxiv - Cancer Biology 2022Quote: ... Experiments were performed at 37°C with a MFP-3D-BIO AFM microscope (Oxford Instruments). Fluorescent images of GFP-expressing HEI-286 SCs and RFP-expressing MiaPaCa-2 cancer cells were acquired together with the stiffness maps ...
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bioRxiv - Immunology 2020Quote: ... Experiments were performed at 37 °C with an MFP-3D-BIO AFM microscope (Oxford Instruments) using cantilevers with 5 μm diameter colloidal borosilicate probes (nominal spring constant k = 0.1 N/m ...
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bioRxiv - Animal Behavior and Cognition 2022Quote: c-Fos positive cells were identified and quantified using Imaris Microscopy Image Analysis Software (Oxford Instruments). LIF files were loaded into IMARIS and Gamma correction (.8% ...
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bioRxiv - Neuroscience 2021Quote: ... AFM imaging was carried out with a Agilent 5500 Scanning Probe Microscope in AAC mode with silicon nitride probes (FastScan-D, Bruker or BL-AC40TS, Oxford Instruments). Images were captured with minimum imaging force at a scan rate of 2 Hz with 512 lines per area ...
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bioRxiv - Cell Biology 2024Quote: ... embryos were injected with the nanobody-coated beads and mRNA mix and incubated for a further 30 min at 25°C prior to imaging on the Andor DragonFly 505 (Oxford Instruments) spinning disk system described below.
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bioRxiv - Cell Biology 2024Quote: ... at concentrations ranging from 1-1000 nM and incubated for a further 30 min at 25°C prior to imaging on the Andor DragonFly 505 (Oxford Instruments) spinning disk system described below.
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bioRxiv - Cell Biology 2024Quote: ... embryos were injected with the nanobody-coated beads and mRNA mix and incubated for a further 1 hour at 22°C prior to imaging on the Andor DragonFly 505 (Oxford Instruments) spinning disk system described below.
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bioRxiv - Developmental Biology 2022Quote: The quantification of GFP::SYP-2 and mCherry::SYP-3 was performed using Imaris (Oxford Instruments) in combination with our whole gonad analysis ...
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bioRxiv - Cell Biology 2021Quote: ... and SiC (250 nm) are deposited on the cleaned surface via Plasma-Enhanced Chemical Vapour Deposition (PE-CVD) at 300°C (Oxford Instruments PlasmaPro 80). PE-CVD ensures a surface smooth enough for TIRF microscopy with fast deposition rates (70 nm/min for SiO2 and 40 nm/min for SiC).
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bioRxiv - Biophysics 2023Quote: 300-bp-long dsDNA fragments were imaged in liquid at 25 °C by using an Asylum Research Cypher ES atomic force microscope (Oxford Instruments, Abingdon, UK). Sample surfaces were scanned in tapping mode with BL-AC40TS (Olympus ...
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bioRxiv - Biophysics 2019Quote: ... Digital images were recorded with a slow scan CCD camera system (Proscan HSC 2 Oxford instruments, Abingdon, USA), and at a minimal under-focus of the microscope objective lens to provide sufficient phase contrast [31] ...
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PLETHORA-WOX5 interaction and subnuclear localisation control Arabidopsis root stem cell maintenancebioRxiv - Plant Biology 2021Quote: ... The visualisation and counting of nuclei with WOX5 expression (Fig. 2) was done with Imaris (version 9.1.2, Bitplane, Oxford Instruments plc). Box and scatter plots showing the number of expressing nuclei were created with Origin 2018b and 2020b (OriginLab Corporation) ...
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bioRxiv - Neuroscience 2024Quote: ... Secondary and tertiary apical dendrites located in the stratum radiatum and were 20 ±3 µm in length and 1.0 ±0.2 μm in diameter were then cropped and modeled using the semiautomated filament tracer tool in Imaris 10.0 (Oxford Instruments). The default setting of the Classify Spines X Tension tool in Imaris was subsequently used to classify spines as stubby ...
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bioRxiv - Biophysics 2023Quote: ... measurements were also performed to measure conduction along Ballona Marsh CB between the IDA microelectrodes and C-AFM tip (Si Probe ASYELEC.01-R2, Oxford Instruments, with a conductive Ti/Ir (5/20) coating and 28±10 nm tip radius ...
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bioRxiv - Bioengineering 2021Quote: ... The excess sample was then drained and washed 2 times with ultrapure water and was dried and imaged using MPF-3D BIO AFM (Asylum Research, Oxford Instruments) in tapping mode in air ...
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bioRxiv - Bioengineering 2021Quote: ... and SMAD 2/3 and YAP expression was quantified using Imaris 9.7.0 3D-4D Imaging Software (Oxford Instruments, Abingdon, United Kingdom). Maximum intensity projections of the F-actin channel were prepared using ImageJ software (NIH ...
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bioRxiv - Microbiology 2021Quote: ... Images were captured at 2 hr intervals for 44 hr using an ANDOR zyla 5.5 MP sCMOS camera (Oxford Instruments, UK).
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bioRxiv - Neuroscience 2023Quote: ... Images of cross sections 1 cm below lesion to visualize vGlut1/2 together with GFP were acquired with Andor Dragonfly 503 spinning disc confocal microscope (Oxford Instruments, Abingdon, UK).