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Citations for Boekel :
1 - 44 of 44 citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2024Quote: ... and sections were incubated with Protease III Reagent for 30 minutes in a 40°C hybridization oven (Boekel Scientific, Model 136400). Probe hybridization (2hr ...
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bioRxiv - Immunology 2024Quote: ... and 2-mercaptoethanol) at 37°C in a Jitterbug Microplate Shaker (Boekel Scientific). After 30 minutes (min ...
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bioRxiv - Molecular Biology 2024Quote: ... by vacuum blotting (Boekel Scientific). The membrane was UV crosslinked (Stratagene) ...
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bioRxiv - Genomics 2024Quote: 42 °C Incubator (Boekel Scientific™ model no ...
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bioRxiv - Evolutionary Biology 2024Quote: ... filled with 500µL of LB inoculated with 2µL of an overnight culture of SeeT2 with a 96-pin replicator (#140500, Boekel Scientific; Feasterville, PA, USA). Overnight co-culture was performed at 37°C within an incubator with ventilation (Aqua-lytic ...
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bioRxiv - Molecular Biology 2023Quote: ... More than 90 million reads were obtained per sample, which were aligned to the mm10 mouse genome using HISAT2 (Kim et al, 2015) in the Galaxy platform (Boekel et al, 2015). Assignment to transcriptional units ...
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bioRxiv - Cancer Biology 2023Quote: ... 5 min at 37°C), washed, dehydrated with ethanol, briefly heat denatured (80°C, 1 min 15 s) in a slide moat (Boekel Scientific) and incubated with a commercially available Cy3-labeled (CCCTAA)3 peptide nucleic acid probe (PNA Bio ...
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bioRxiv - Genetics 2023Quote: ... by vacuum blotting (Boekel Scientific). The membrane was UV crosslinked (Stratagene) ...
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bioRxiv - Microbiology 2023Quote: ... bacterial isolates were either plated on solid medium (square plates) using a 96-pin microplate replicator (Boekel Scientific) for siderophore and phosphate solubilisation assays ...
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bioRxiv - Genomics 2023Quote: ... Thirty grams from each pooled litter grab sample was mixed with 120 ml phosphate buffered saline and shook with a hand wrist shaker (Boekel Scientific, Model 401000) for 10 min ...
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bioRxiv - Microbiology 2023Quote: ... Tn mutants were inoculated using a metal replicating pin (Boekel Scientific) into 2 mL deep 96-well plates (Biotix ...
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bioRxiv - Neuroscience 2023Quote: Slides were incubated in protease plus in a humidified tray in a hybridization oven (Boekel Scientific 240200) oven for 30 minutes at 40°C ...
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bioRxiv - Microbiology 2023Quote: ... the frozen stocks stored at -80°C were stamped onto YPD agar in an OmniWell agar plate using a flame-sterilized microplate replicator (Boekel Scientific) and grown at room temperature ...
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bioRxiv - Evolutionary Biology 2023Quote: ... resistant mutants were revived from the freezer by inoculating 1 μl of culture on to LB agar using a 96-well pin replicator (Boekel Scientific, USA). Following overnight growth ...
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bioRxiv - Neuroscience 2023Quote: Slides were incubated in protease plus in a humidified tray in a hybridization oven (Boekel Scientific 240200) for 30 minutes at 40°C ...
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bioRxiv - Biochemistry 2023Quote: ... Nuclear run-ons were performed for 3 minutes at 37°C on a Groovin’ Tubes thermoshaker (Boekel Scientific, 270500), on a mixture of 10 million human and 100,000 Drosophila melanogaster nuclei per replicate ...
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bioRxiv - Neuroscience 2022Quote: ... Hybridization buffers containing 5’ HEX-labeled probes were used to incubate slices in an in-situ hybridization apparatus (Boekel Slide Moat, Feasterville, Pennsylvania) at 52 °C under the condition of heat preservation and humidification ...
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bioRxiv - Cancer Biology 2022Quote: ... Spectra were then searched in the Galaxy framework using tools from the Galaxy-P project (Boekel et al., 2015; Goecks et al., 2010), including MSGF+ (Kim and Pevzner ...
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bioRxiv - Biophysics 2022Quote: ... and supplemented with 1% (w/v) glycol-diosgenin (GDN) and rotated on an Orbitron rotator II (speed mode S) (Boekel Scientific) at 4°C for 2 h ...
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bioRxiv - Microbiology 2022Quote: ... Antibiotic plates were inoculated from a master plate using a 96-pin microplate replicator (Boekel 140500). Inoculation plates were prepared by adding 200 µL of overnight culture into each well and incubating at 37 °C with 200 rpm shaking ...
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bioRxiv - Developmental Biology 2022Quote: ... smo3/ CyO} (a gift from C. Boekel), {yw1118 ...
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bioRxiv - Molecular Biology 2022Quote: ... Cells were washed three times with 1X PBS and the chamber slide was incubated in a hybridization oven (Boekel Scientific, RapidFISH) prewarmed to 37°C ...
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bioRxiv - Cell Biology 2022Quote: ... pastoris genomes using HISAT2 (Kim et al, 2015) in the Galaxy platform (Boekel et al, 2015). Assignment to transcriptional units ...
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bioRxiv - Microbiology 2022Quote: ... Replicators with 96 one-millimeter pins (Boekel Industries # 140500) were sterilized in an autoclave before the start of the experiment and with an open flame between the transfer steps ...
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bioRxiv - Molecular Biology 2022Quote: ... Reaction tubes were then transferred on ice and exposed to 365 nm wavelength light in a UV oven for 1 minute (∼400 mJ, Boekel #234100). A loading dye (4X SDS-page ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Populations were initiated from the mixed cultures by diluting 1 µl of each into 200 µl of fresh culture using a 96-pin replicator (Boekel Scientific, Feasterville, PA, USA). At the end of each day ...
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Neural circuit-wide analysis of gene expression during deafening-induced destabilization of birdsongbioRxiv - Neuroscience 2022Quote: ... Slides were then transferred to a SlideMoat (Boekel Scientific) at 37 °C ...
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bioRxiv - Biophysics 2022Quote: ... and supplemented with 1% (w/v) glycol-diosgenin (GDN) and rotated on an Orbitron rotator II (speed mode S) (Boekel Scientific) at 4°C for 2 h ...
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bioRxiv - Physiology 2021Quote: ... The tubes were then placed into a dry heat bath (Tropicooler 260014-2, Boekel Scientific ...
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bioRxiv - Biochemistry 2021Quote: ... Reaction master mix and polymerase were separately equilibrated to −19°C on a TropiCoolerTM (Boekel Scientific) for 30 minutes ...
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bioRxiv - Neuroscience 2021Quote: ... Slides were dehydrated again and transferred to a SlideMoat (Boekel Scientific) at 37°C ...
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bioRxiv - Molecular Biology 2021Quote: ... the simulated structure was refined by GalaxyRefine2 from GalaxyWEB (Afgan et al., 2018; Boekel et al., 2015) to generate the final predicted structure.
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bioRxiv - Pharmacology and Toxicology 2021Quote: ... The plate was shaken at 1,000 rpm on an orbital shaker (Boekel Scientific Jitterbug, model 130000) for 10 min ...
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bioRxiv - Physiology 2021Quote: ... we used a benchtop chiller with an antifreeze bath set to 1°C (MicroCooler II Model 260010, Boekel Scientific ...
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bioRxiv - Biophysics 2020Quote: ... Glass slides (Fisherbrand) were first treated in an ozonator chamber (BOEKEL UV Clean 135500) for 20 min (10 min per side) ...
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bioRxiv - Plant Biology 2020Quote: ... The clean read data were uploaded to the local Galaxy platform (Boekel et al., 2015), and analyzed therein using Salmon (Patro et al. ...
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bioRxiv - Neuroscience 2020Quote: ... are considered for testing the existence of the association between brain structure and the same psychological score in an independent sample (e.g. (Boekel et al., 2015)) ...
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bioRxiv - Neuroscience 2020Quote: ... it does not quantify the decisiveness of the evidence that the data provides for and against the presence of the correlation (Boekel et al., 2015; Wagenmakers et al., 2015). However ...
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bioRxiv - Neuroscience 2020Quote: ... the alternative hypothesis (H1) in this study was considered one-sided (in line with Boekel et al. (2015)).
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bioRxiv - Neuroscience 2019Quote: ... the alternative hypothesis (H1) in this study was considered one-sided (in line with Boekel et al. (2015)) ...
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bioRxiv - Neuroscience 2019Quote: ... it does not quantify the decisiveness of the evidence that the data provides for and against the presence of the correlation (Boekel et al., 2015; Wagenmakers et al., 2015). However ...
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bioRxiv - Molecular Biology 2019Quote: ... by vacuum blotting (Boekel Appligene vacuum blotter) for 1 hour at 50 mbar with the gel covered in 10x SSC buffer (1.5 M NaCl ...
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bioRxiv - Molecular Biology 2019Quote: ... and the plate incubated for 1 hr at 37°C on a Jitterbug mixer (Boekel Scientific #130000) with mix setting set to 1 ...
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bioRxiv - Evolutionary Biology 2019Quote: ... Temperatures were manipulated using a dry block incubator (Boekel Scientific Tropicooler), and increased or decreased at a rate of 1 °C min−1 ...