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Citations for Illumina :
1 - 44 of 44 citations for Non Ab Component of Alzheimer's Disease Amyloid since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2024Quote: ... Disease-relevant genomic alterations (Agilent Haploplex assay, Illumina HiSeq2500), fusion transcripts (Illumina HiSeq2500) ...
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bioRxiv - Immunology 2021Quote: ... DNA was genotyped using the Illumina Global Screening Array v3.0+ multi disease bead chips (Illumina) and subjected to standard quality control filters ...
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bioRxiv - Developmental Biology 2019Quote: ... ATAC used components from the Nextera DNA Library Preparation Kit (Illumina) as described previously (Buenrostro et al ...
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bioRxiv - Genetics 2019Quote: A principal components analysis (PCA) on genome-wide genotyped SNPs (Illumina Infinium Omni2.5) was conducted to model continuous axes of genetic variation within the GRaD sample using EIGENSTRAT and is a common method used to correct for differences in genetic substructure across ethnic groups (Cook & Morris ...
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bioRxiv - Genetics 2021Quote: ... Both waves were genotyped by the NIH Center for Inherited Disease Research (CIDR; Johns Hopkins University) using the HumanOmni2.5 arrays from Illumina (San Diego, CA). Raw data from both phases were clustered and called together ...
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bioRxiv - Genetics 2019Quote: LBD cases and controls were genotyped for ongoing projects at the Neurodegenerative Diseases Research Unit (NDRU) using the NeuroChip genotyping array (Illumina, San Diego, CA, USA). Genotyping was performed as previously described (Blauwendraat et al ...
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bioRxiv - Genomics 2024Quote: ... we first extracted the SVs at chromosome level merged and normalized multi-sample VCF files with MAF >= 0.05 using bcftools (v1.15.1) and then used principal component analysis module of AKT (v0.3.3) (https://github.com/Illumina/akt) on the extracted variants using the following command.
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bioRxiv - Genetics 2023Quote: ... Non-overlapping unique dual indexes (Illumina #20022371) were then added to each reaction and ligated according to manufacturer instructions ...
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bioRxiv - Physiology 2023Quote: Image analyses and base calling were performed using the NovaSeq Control Software and Real-Time Analysis component (Illumina). Demultiplexing was performed using Illumina’s conversion software (bcl2fastq 2.20) ...
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bioRxiv - Cell Biology 2021Quote: Image analyses and base calling were performed using the NovaSeq Control Software and the Real-Time Analysis component (Illumina). Demultiplexing was performed using the 10X Genomics software Cellranger mkfastq (v3.1.0 for experiment 1 and v6.0.1 for experiment 2) ...
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bioRxiv - Genomics 2021Quote: ... sex and 20 genetic principal components (derived from multidimensional scaling of genotype data from the Illumina 610-Quadv1 array).
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bioRxiv - Molecular Biology 2019Quote: ... The samples were then transferred on to the ice and the components (15 μl Blunt ligase master mix, 2.5 μl NEB Next adaptor for Illumina, and 1 μl ligation enhancer to a total volume of 83.5 μl ...
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bioRxiv - Physiology 2023Quote: Image analyses and base calling were performed using NovaSeq Control Software and the Real-Time Analysis component (Illumina, USA). Demultiplexing was performed using Illumina’s conversion software (bcl2fastq 2.20) ...
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bioRxiv - Genomics 2023Quote: ... Image analyses and base calling were performed using the Miniseq Control Software and the Real-Time Analysis component (Illumina). Demultiplexing was performed using Illumina’s conversion software (bcl2fastq 2.20.0.422) ...
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bioRxiv - Genomics 2023Quote: ... using the single read 100 nt protocol on 1 lane of a flow cell SP.Image analyses and base calling were performed using the Miniseq Control Software and the Real-Time Analysis component (Illumina). Demultiplexing was performed using Illumina’s conversion software (bcl2fastq 2.20.0.422) ...
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bioRxiv - Developmental Biology 2023Quote: Ribosomal RNAs were depleted from 1 µg of total RNA using TruSeq Stranded Total RNA kit Ribo-Zero components (Illumina) according to the manufacturer’ s protocol ...
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bioRxiv - Genetics 2023Quote: ... and embryos were then either recommended for transfer or not recommended for transfer using the following workflow: FASTQ files were obtained from MiSeq Illumina based on two diagnostic tests (Illumina VeriSeq PGS and AB Vector AB-PGT) and aligned on GRCh37 by BlueFuse Multi software (Illumina ...
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bioRxiv - Genetics 2019Quote: ... microRNAs and other non-coding RNAs were captured by Illumina TruSeq Exome Enrichment Kit and sequenced on a HiSeq 2000 instrument (Illumina ...
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bioRxiv - Microbiology 2022Quote: ... Non-SNP sites in the core genome identified by Illumina reads were considered true negatives (TN) ...
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bioRxiv - Immunology 2019Quote: ... Tru-seq (non-stranded and PolyA selected) sample preparation kits (Illumina) were then used to purify poly-A transcripts and generate libraries with multiplexed barcode adaptors ...
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bioRxiv - Molecular Biology 2021Quote: RNA-seq libraries were performed using the non-stranded mRNA Kit (Illumina). Quality and integrity of RNA was assessed with the Fragment Analyzer using the standard sensitivity RNA Analysis Kit (Advanced Analytical) ...
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bioRxiv - Plant Biology 2021Quote: ... RNA-seq libraries were performed using the non-stranded mRNA Kit from Illumina (San Diego ...
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bioRxiv - Genetics 2021Quote: ... Illumina’s non-redundant unique dual indexes (UDI) were used in this step (IDT for Illumina Nextera DNA Unique Dual Indexes Set C ...
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bioRxiv - Developmental Biology 2022Quote: ... 250 ng RNA were used to generate libraries using Truseq RNA non-stranded kit (Illumina), which were sequenced in NextSeq 500 platform at NIEHS Epigenomics Core with the sequencing parameter ...
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bioRxiv - Immunology 2019Quote: ... The B-cell repertoire sequences consist of 150bp non-overlapping paired-end reads (Illumina MiSeq), with one read covering much of the V gene and the other read covering the area around the CDR3 region and the J gene ...
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bioRxiv - Cell Biology 2024Quote: ... Libraries were prepared using non-strand-specific Illumina TruSeq Sample Preparation Kits followed by Illumina sequencing ...
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bioRxiv - Microbiology 2020Quote: ... Final library pools were spiked with a non-indexed PhiX control library (Illumina, San Diego, CA, USA). Pair-end sequencing (2 × 150bp ...
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bioRxiv - Evolutionary Biology 2019Quote: ... lactis RNA samples was processed for sequencing using the TruSeq non-stranded RNA Library Prep Kit (Illumina), and 50 bp single end sequencing was performed on an Illumina HiSeq2000 machine at the Duke IGSP sequencing facility ...
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bioRxiv - Genomics 2020Quote: ... non-poly(A) enriched stranded libraries were constructed using the TruSeq Stranded Total RNA Library Prep Kit (Illumina) and the Ribo-Zero Gold Set A kit (Epicenter) ...
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bioRxiv - Molecular Biology 2021Quote: ... All non-target sequences were screened by matching to the PhiX genome used by Illumina (Genbank Accession NC001422) with BLAST+.
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bioRxiv - Evolutionary Biology 2023Quote: ... PolyA+ libraries of the large-scale dataset were prepared with the Truseq V2 kit (Illumina, non stranded protocol), starting with 150 ng total RNA and reducing the amplification step to only 12 cycles and sequenced on an Illumina Hi-seq2000 sequencer (100 bp paired end reads ...
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bioRxiv - Genomics 2023Quote: ... Non-depleted libraries were pooled at equimolar concentrations and sequenced on a NovaSeq6000 instrument (Illumina, San Diego, CA, USA) to generate 150-bp paired-end reads.
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bioRxiv - Genomics 2020Quote: ... a major transcript per gene was selected if a transcript had the highest non-zero FPKM (Fragments Per Kilobase of transcript per Million mapped reads) determined from Illumina RNA-Seq datasets of diverse tissues by Cufflink (v2.2.1 ...
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bioRxiv - Molecular Biology 2022Quote: ... followed by library construction using non-stranded (Replicate 1) or stranded (Replicates 2 and 3) TruSeq mRNA Library Prep Kit (Illumina). The resulting libraries were sequenced on Hiseq4000.
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bioRxiv - Evolutionary Biology 2021Quote: ... except for two adult gibbosus and tuberosus males for which the non-strand-specific TruSeq Total RNA with Ribo-Zero kit (Illumina) was used ...
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bioRxiv - Genomics 2023Quote: ... We sequenced WGBS libraries on an Illumina HiSeq4000 instrument using 150 bp paired-end indexed reads and 25% of non-indexed PhiX library control (Illumina). We indicate coverage and average GpG depth in Table S2 ...
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bioRxiv - Developmental Biology 2023Quote: ... poly-A selection and RNA-sequencing library preparation was done using non strand massively-parallel cDNA sequencing (mRNA-Seq) protocol from Illumina, the TruSeq RNA Library Preparation Kit v2 ...
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bioRxiv - Genomics 2023Quote: ... Non-depleted WGS libraries were pooled at equimolar concentrations and sequenced on a NovaSeq6000 instrument (Illumina, San Diego, CA, USA) to generate 150-bp paired-end reads.
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bioRxiv - Microbiology 2023Quote: ... and colonising (clinical non-CAPA) (C402, C404-C407, C409, C410) isolates from the Netherlands (n=9) were sequenced using NextSeq 550 sequencer (Illumina), and 218 UK and Irish isolates and the five IA isolates (C307 ...
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bioRxiv - Genomics 2024Quote: RNA libraries were prepared starting with 300 ng of total RNA using a non-stranded mRNA Seq (TruSeq RNA Library Preparation Cat. RS-122–2001) from Illumina according to the manufacturer’s recommendations ...
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bioRxiv - Molecular Biology 2021Quote: ... Libraries from knockout FL83B cells and their corresponding non-targeting controls were prepared with TruSeq Stranded mRNA Library Kit (Illumina, #20020595), pair-end sequencing was performed using the NovaSeq 6000 (Illumina) ...
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bioRxiv - Cancer Biology 2021Quote: ... In brief, RNA-seq libraries (non-strand-specific, paired end) were prepared with the NEBNext® Ultra™ RNA Library Prep Kit (Illumina) and were sequenced according to the paired-end 150bp protocol using NovaSeq 6000 ...
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bioRxiv - Microbiology 2023Quote: ... followed by the second strand cDNA synthesis using dTTP for non-directional library (NEB Next® Ultra RNA Library Prep Kit for Illumina®). After end repair ...
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bioRxiv - Plant Biology 2022Quote: ... Six TruSeq Stranded cDNA libraries (three for healthy and three for AMV-infected plants) were sequenced by non-paired end sequencing (75 bp) in a NextSeq 550 (Illumina; San Diego, California, USA). The bioinformatics analysis was carried out by the Bioinformatic Service of IBMCP ...