Labshake search
Citations for PacBio :
1 - 10 of 10 citations for Des Arg10 Kallidin since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2022Quote: The initial HiFi assembly was constructed de novo from PacBio reads using Wtdbg2 (Ruan & Li ...
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bioRxiv - Evolutionary Biology 2022Quote: A genome assembly was initially generated de novo from PacBio reads from X’X females ...
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bioRxiv - Plant Biology 2024Quote: ... we proceeded with the de novo assembly of long reads from PacBio HiFi Sequencing data using HiCanu63,64 optimized for high-fidelity long reads ...
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bioRxiv - Genetics 2022Quote: ... we de novo assembled the genomes of 10 samples in this study sequenced by PacBio HiFi reads and then extracted NRSs (Table S3) ...
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bioRxiv - Genomics 2023Quote: De novo variant calling was done using deepvariant (Poplin et al. [2018]; v1.1.0; model_type=PACBIO) using the HIFI host reads aligned to GRCm39 with pbmm2 (v1.4.0 ...
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bioRxiv - Genomics 2019Quote: ... code at https://github.com/MariaNattestad/Assemblytics/releases/tag/v1.0) with default parameters and from two haploid de novo assemblies from PacBio. For each genome assembly ...
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bioRxiv - Evolutionary Biology 2020Quote: ... DNA isolation and sequencing was carried out by Dovetail Genomics (Scotts Valley, CA, USA) using PacBio sequencing for de novo assembly with Arrow (genomicconsensus package, PacBio tools) followed by preparation of Chicago and HiC libraries that were sequenced on Illumina platforms ...
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bioRxiv - Genomics 2022Quote: ... hatsudake JH5 was de novo sequenced using high throughput Illumina Hiseq X-Ten and PacBio RSII long-read sequencing platforms (PacBio P6-C4) at Beijing Novogene Technology ...
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Genomic local adaptation of a generalist plant species to pollinator communities and abiotic factorsbioRxiv - Plant Biology 2022Quote: ... with 16 threads of freebayes running in parallel across regions of 100kb in the de novo polished genome assembly (PacBio, Illumina and Bionano). Single nucleotide polymorphisms (SNPs ...
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bioRxiv - Molecular Biology 2024Quote: ... 2014) was used to create a new structural annotation integrating data from de novo transcriptomes (based on Illumina and PacBio reads obtained in this study), ab initio gene prediction and database gene models ...