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1 - 41 of 41 citations for Recombinant Human Pro NGF Protein since 2019

• Architectural asymmetry enables DNA transport through the Helicobacter pylori cag type IV secretion system

  Mackenzie E. Ryan, et al., bioRxiv - Microbiology 2023

  Quote: ... Protein sequence alignments were performed using MegAlign Pro (DNAstar). Superimposed images of protein structures were generated using ChimeraX Matchmaker84 ...
• Defective heart chamber growth and myofibrillogenesis after knockout of adprhl1 gene function by targeted disruption of the ancestral catalytic active site

  Stuart J. Smith, et al., bioRxiv - Developmental Biology 2020

  Quote: ... SeqMan Pro (DNASTAR) was also used to sort the sequences according to the variants found at the gRNA site and count the number of wild-type reads that occurred for each tadpole.
• Translation initiation factor eIF1.2 promotes Toxoplasma stage conversion by regulating levels of key differentiation factors

  Fengrong Wang, et al., bioRxiv - Microbiology 2023

  Quote: ... The visualization of proteins sequences alignment was generated using ClustalW in MegAlign Pro (v17.5.0, DNASTAR).
• Identification of root rot resistance QTLs in pea using Fusarium solani f. sp. pisi-responsive differentially expressed genes

  Bruce A. Williamson-Benavides, et al., bioRxiv - Plant Biology 2020

  Quote: ... SeqMan Pro (DNASTAR, WI, USA) and custom scripts were utilized to identify single nucleotide polymorphisms (SNPs ...
• Parallel Evolution of Linezolid Resistant Staphylococcus aureus in Patients with Cystic Fibrosis

  Nicholas J. Pitcher, et al., bioRxiv - Microbiology 2023

  Quote: ... we used MegAlign Pro (DNASTAR) and used Escherichia coli strain ATCC 8739 (GenBank accession NC_010468 ...
• Epitope Engineered Human Haematopoietic Stem Cells are Shielded from CD123-targeted Immunotherapy

  Romina Marone, et al., bioRxiv - Bioengineering 2023

  Quote: ... Sequences were analysed using MegAlign Pro (DNASTAR).
• La Crosse virus reassortants highlight genomic determinants of infection and pathogenesis

  Nicole C. Rondeau, et al., bioRxiv - Microbiology 2024

  Quote: RNA conservation within WT strains was aligned using Smitt-Watermen RNA alignment and protein conservation within WT strains was generated using ClustalW Multiple Sequence alignment with MegAlign Pro (DNASTAR; Version 17.4.1.17).
• A novel and highly divergent Canine Distemper Virus lineage causing distemper in ferrets in Australia

  Ankita M. George, et al., bioRxiv - Microbiology 2021

  Quote: Sequences were assembled in SeqMan Pro 13 (DNASTAR). Assembled sequences were compared through the using BLASTn (NCBI ...
• Comparative analysis of CPI-motif regulation of biochemical functions of actin capping protein

  Patrick McConnell, et al., bioRxiv - Biochemistry 2020

  Quote: Multiple sequence alignment of CPI-motif peptides was performed using the ClustalW algorithm within the DNASTAR Lasergene Suite/MegAlign Pro application (MegAlign Pro 15.0, DNASTAR, Madison, WI). An unrooted phylogenetic tree was generated from the aligned CPI-motif peptides using Interactive Tree of Life (iTOL V4.4.2 ...
• Hybrid histidine kinase BinK represses Vibrio fischeri biofilm signaling at multiple developmental stages

  Denise A. Ludvik, et al., bioRxiv - Microbiology 2021

  Quote: ... Sequence data were analyzed with SeqMan Pro (DNAStar software) and Benchling ...
• Malassezia sympodialis Mala s 1 allergen is a potential KELCH protein that cross reacts with human skin

  Dora E. Corzo Leon, et al., bioRxiv - Immunology 2022

  Quote: ... Sequences were analysed using SeqMan Pro (DNASTAR, Madison, WI US), and species identified by BLAST (https://blast.ncbi.nlm.nih.gov/).
• CD4-binding site immunogens elicit heterologous anti-HIV-1 neutralizing antibodies in transgenic and wildtype animals

  Harry B. Gristick, et al., bioRxiv - Immunology 2022

  Quote: ... The sequence data was analyzed using SeqMan Pro (DNASTAR, v13.02). After two days ...
• Impact of different amino acid substitutions in penicillin-binding protein 3 on beta-lactam susceptibility in Haemophilus influenzae

  Josiane Reist, et al., bioRxiv - Microbiology 2019

  Quote: ... Sequences were aligned with Lasergene SeqMan Pro (DNASTAR, Madison, WI, USA) and translated into amino acid sequences using the ExPASy translate tool (http://web.expasy.org/translate/) ...
• Prospective cohort study reveals unexpected aetiologies of livestock abortion in northern Tanzania

  Kate M. Thomas, et al., bioRxiv - Systems Biology 2021

  Quote: ... Sequence traces for each sample were assembled using SeqMan Pro (DNASTAR Lasergene) and consensus sequences that excluded the terminal primer sites were generated ...
• Distinct YFV lineages co-circulated in the Central-Western and Southeastern Brazilian regions from 2015 to 2018

  Edson Delatorre, et al., bioRxiv - Epidemiology 2019

  Quote: ... The sequences were assembled with SeqMan Pro version 8.1.5 (DNASTAR, Madison, WI, USA). The Molecular Evolutionary Genetics Analysis (MEGA ...
• Co-regulation and functional cooperativity of FOXM1 and RHNO1 bidirectional genes in ovarian cancer

  Carter J Barger, et al., bioRxiv - Cancer Biology 2019

  Quote: ... DNA sequence information was analyzed using the Lasergene SeqMan Pro program (DNASTAR, Inc.).
• Genomic analysis reveals the presence of emerging pathogenic Klebsiella lineages aboard the International Space Station

  Georgios Miliotis, et al., bioRxiv - Microbiology 2023

  Quote: ... and 1492R primers and the sequences were assembled using SeqMan Pro from DNAStar Lasergene Package (DNASTAR Inc. ...
• Potential selection and maintenance of manure-originated multi-drug resistant plasmids at sub-clinical antibiotic concentrations

  Tam T. Tran, et al., bioRxiv - Microbiology 2023

  Quote: ... Plasmid maps were constructed using SeqBuilder Pro (version 16.0.0) (DNAstar, Madison, Wisconsin, USA).
• Science abhors a surveillance vacuum: detection of ticks and tick-borne bacteria in southern New Mexico through passive surveillance

  Paige R. Harman, et al., bioRxiv - Zoology 2023

  Quote: ... Resulting sequences were aligned using Lasergene 17 Seqman Pro software (DNASTAR, Madison, WI) and compared with published gene sequences available in GenBank using the Nucleotide Basic Local Alignment Search Tool-BLASTn (https://blast.ncbi.nlm.nih.gov/Blast.cgi) ...
• A photosynthesis operon in the chloroplast genome drives speciation in evening primroses

  Arkadiusz Zupok, et al., bioRxiv - Evolutionary Biology 2020

  Quote: ... III and IV genotypes) were identified by visual inspection in SeqMan Pro v15.2.0 (DNASTAR) cf ...
• Insights into the L3 to L4 developmental program through proteomics

  Sasisekhar Bennuru, et al., bioRxiv - Microbiology 2021

  Quote: ... collagens (B. malayi and C. elegans) were aligned in MegAlign Pro (DNASTAR, Lasergene 17) using MUSCLE algorithm ...
• Dissemination of linezolid-resistance through sex pheromone plasmid transfer in Enterococcs faecalis

  Jiaqi Zou, et al., bioRxiv - Microbiology 2019

  Quote: ... the remaining 285,862 reads were assembled using SeqMan Pro (version 14.1.0.118, DNASTAR, Madison, WI), resulting in a circular assembly of the complete plasmid genome ...
• Mutations in embB406 are associated with low-level ethambutol resistance in Canadian Mycobacterium tuberculosis isolates

  Morgan R. Hiebert, et al., bioRxiv - Microbiology 2023

  Quote: ... Sequence data from primers were paired and trimmed in SeqMan Pro 15 (DNASTAR, WI) before MUSCLE alignment (24 ...
• Investigating the origin of subtelomeric and centromeric AT-rich elements in Aspergillus flavus

  Arthur J. Lustig, bioRxiv - Evolutionary Biology 2022

  Quote: Chromosomal alignments and images were generated using Lasergene MegAlign Pro 7.2 software (DNASTAR, Inc). The MegAlign program uses a Mauve algorithm [46] to analyze alignment between homologous chromosomes in pairs of strains ...
• The characterisation of phytoene synthase-1 and 2, and 1-D-deoxy-xylulose 5-phosphate synthase genes from red chilli pepper (Capsicum annuum)

  Harriet M. Berry, et al., bioRxiv - Molecular Biology 2023

  Quote: ... Construction of contigs was carried out using SeqMan Pro and Seqbuilder (Lasergene, DNAstar, UK). In silico 3D protein models was performed using SWISS-MODEL (http://swissmodel.Expasy.org ...
• A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor

  Jay Vornhagen, et al., bioRxiv - Microbiology 2020

  Quote: ... complete plasmid MSA was performed and visualized using Mauve (MegAlign Pro, DNASTAR Inc., Madison, WI).
• Severe perinatal hydrops fetalis in genome edited pigs with a biallelic five base pair deletion of the Marfan syndrome gene, FBN1

  Hiu-Gwen Tsang, et al., bioRxiv - Molecular Biology 2020

  Quote: ... Sequencing data were analysed using SeqMan Pro and SeqBuilder (Lasergene 13, DNASTAR Inc, Madison, WI, USA).
• TMEM65-dependent Ca²⁺ extrusion safeguards mitochondrial homeostasis

  Massimo Vetralla, et al., bioRxiv - Biochemistry 2023

  Quote: ... Multiple sequence alignments (ClustalW) and phylogenetic trees (RAxML) were performed using MegAlign Pro (DNASTAR version 17.3.1). Visualization of protein topology was generated using Protter2 ...
• WOX9 functions antagonistic to STF and LAM1 to regulate leaf blade expansion in Medicago truncatula and Nicotiana sylvestris

  Tezera W. Wolabu, et al., bioRxiv - Plant Biology 2020

  Quote: ... Reads were analyzed by aligning with the reference sequence using the SeqMan Pro 15.0.1 (DNASTAR software for life scientists) (https://www.dnastar.com/quote-request/).
• Extracellular electron transfer increases fermentation in lactic acid bacteria via a hybrid metabolism

  Sara Tejedor-Sanz, et al., bioRxiv - Microbiology 2021

  Quote: ... plantarum strain 8.1 and NCIMB700965 were aligned to the NCIMB8826 genome in MegAlign Pro (DNAstar Inc., Madison, WI, USA).
• In vivo diversification of target genomic sites using processive T7 RNA polymerase-base deaminase fusions blocked by RNA-guided dCas9

  Beatriz Álvarez, et al., bioRxiv - Bioengineering 2019

  Quote: ... The resulting 2 reads per colony were mapped against the Ptac-URA3-PT7 reference sequence (942 bp) to detect variants using the program SeqMan Pro (DNAstar).
• SLC25A39 is necessary for mitochondrial glutathione import in mammalian cells

  Ying Wang, et al., bioRxiv - Biochemistry 2021

  Quote: ... Substrate-binding residues in human SLC25A39 were predicted based on biochemical and genetic analyses of the related ATP-ADP carrier using the ClustalW algorithm in MegAlign Pro 16 (DNASTAR)19,49 ...
• Ca_V2.1 α₁ subunit motifs that control presynaptic Ca_V2.1 subtype abundance are distinct from Ca_V2.1 preference

  Jianing Li, et al., bioRxiv - Neuroscience 2023

  Quote: ... Amino acid alignment of above constructs were performed under Clustal Omega function using the MegAlign Pro 17 program implemented in the Lasergene software package (v.17, DNASTAR). The following CaV2 hybrid constructs were created.
• On the origin and evolution of the mosquito male-determining factor Nix

  James K. Biedler, et al., bioRxiv - Evolutionary Biology 2023

  Quote: ... Phylogenetic inference using Maximum Likelihood was performed with 1000 bootstrap replicates using RAxML (Stamatakis 2014) as a feature of MegAlign Pro®(Version 17.2.1. DNASTAR. Madison, WI). Phylogenetic inference was performed using MrBayes 3.2.7a x86_64 (Huelsenbeck and Ronquist 2001) ...
• Mitogenomic Phylogeny of Callithrix with Special Focus on Human Transferred Taxa

  Joanna Malukiewicz, et al., bioRxiv - Genomics 2021

  Quote: ... Trace files of resulting forward and reverse reads from LR-PCR products for each individual sequence were inspected by eye and merged into a single contig for each sampled individual using SEQMAN PRO software from the DNAStar Lasergene Core 10 suite (DNASTAR, Madison, WI). Mitogenomes from WGS data were assembled with NOVOPlasty 2.6.4 [50] (scripts available at https://github.com/Callithrix-omics/Callithrix_mtDNA.git) ...
• Differential cross-reactivity to the influenza B virus haemagglutinin underpins lineage-specific susceptibility between birth cohorts

  Peta Edler, et al., bioRxiv - Immunology 2023

  Quote: ... Viruses were sequenced via Sanger sequencing and aligned using the multiple alignment using fast Fourier transform algorithm in MegAlign Pro 13 (DNASTAR Lasergene 13). A time-structured phylogenetic tree was estimated using BEAST 1.10.4 (48) ...
• Diversity of Antimicrobial-Resistant Aeromonas Species Isolated from Aquatic Environments in Brazil

  Danieli Conte, et al., bioRxiv - Microbiology 2020

  Quote: ... Nucleotide and protein sequences were analyzed using Lasergene Software Package (DNASTAR, Madison, WI, USA). Resistance gene references were selected in GenBank database.
• New Tricks for an old molecule: Preserved antibacterial activity of ribosomal protein S15 during evolution

  Baozhen Qu, et al., bioRxiv - Immunology 2020

  Quote: ... Multiple protein sequences were aligned using the MegAlign program of the LASERGENE software suite (DNASTAR). The SWISS-MODEL prediction algorithm (https://swissmodel.expasy.org/ ...
• Molecular characterization of RIGI, TLR7 and TLR3 as immune response gene of indigenous ducks in response to Avian influenza

  Aruna Pal, Abantika Pal, Pradyumna Baviskar, bioRxiv - Genomics 2020

  Quote: Nucleotide variation for the proteins was detected from their nucleotide sequencing and amino acid variations were estimated (DNASTAR). 3D structure of the derived protein was estimated for both indigenous ducks and chicken by Pymol software ...
• Establishing Prokaryotic Expression System of Angiotensin-Converting Enzyme 2 (ACE2) gene in pigs

  Hang Xiao, et al., bioRxiv - Biochemistry 2020

  Quote: ... predict the transmembrane and transmembrane directions of ACE2 encoded protein and Kyte-Doolittle method predicts the hydrophilic region by DNASTAR software.
• Orientia tsutsugamushi Ank5 directs ubiquitination and proteasomal degradation of NLRC5 to inhibit major histocompatibility complex class I expression

  Haley E. Adcox, et al., bioRxiv - Microbiology 2023

  Quote: ... predicted atomic protein docking interactions between Ank5 and the NLRC5 NACHT domain using the SwarmDock algorithm.135 Protean 3D (DNASTAR) was used to visually depict the NovaDock predictions.