Labshake search
Citations for Illumina :
1 - 50 of 133 citations for Very Low Density Lipoprotein Receptor VLDLR Antibody since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Genomics 2021Quote: ... Most of the cows were originally genotyped with a custom low-density 10k SNP panel or a standard medium density 50k SNP array (BovineSNP50k BeadChip: Illumina Inc). The low-density genotypes were imputed to the 50k array using a reference set of approximately 14,000 animals with real 50k genotypes ...
-
bioRxiv - Genomics 2021Quote: Microarray-derived SNP genotypes were available for 30,499 BSW cattle typed on seven low-density (20k-150k) and one high-density chip (Illumina BovineHD; 777k). Coordinates of the SNP were originally determined according to the ARS-UCD1.2 build ...
-
bioRxiv - Genetics 2021Quote: ... Unanchored contigs shorter than 40kb were removed (considered as likely contaminants as very few Illumina reads were mapped on these short contigs).
-
bioRxiv - Genomics 2019Quote: ... (2) receptors obtained from Illumina sequencing of the transcriptome of the main olfactory epithelium ...
-
bioRxiv - Genomics 2020Quote: The DNA samples were genotyped with various low-density assays and were imputed to the combination of Illumina BovineHD (Illumina, San Diego, CA) and the GeneSeek Genomic Profiler F250 (GeneSeek ...
-
bioRxiv - Genomics 2019Quote: ... low call rate (> 5% low quality data [Illumina detection P>1×10−6 ...
-
bioRxiv - Evolutionary Biology 2020Quote: ... We found 41 SNPs in the strain MvSn-1249-A2 (the very same fungal strain as the reference genome also sequenced with Illumina), indicating low rates of false positives in our SNP calling ...
-
bioRxiv - Genomics 2019Quote: ... Low-quality reads marked by Illumina sequencers in the FASTQ files were removed ...
-
bioRxiv - Immunology 2023Quote: ... and MiSeq low-depth sequencing (Illumina) to determine the approximate number of cells and estimate quality of the dataset ...
-
bioRxiv - Microbiology 2021Quote: ... Adapters and low-quality bases from Illumina reads were trimmed by fastp (ver ...
-
bioRxiv - Microbiology 2021Quote: ... In order to distinguish low frequency variants from Illumina sequence errors ...
-
bioRxiv - Microbiology 2021Quote: ... In order to distinguish low frequency variants from Illumina sequence errors ...
-
bioRxiv - Immunology 2022Quote: ... TrueSeq DNA Low Throughput adaptors used were from Illumina® TruSeq™ KAPA Si adaptor kit KK8701 and adaptor concentrations and the number of PCR cycles used to amplify the final libraries were adjusted to the total amount of RNA used for each library ...
-
bioRxiv - Cancer Biology 2023Quote: Low quality reads and adaptors were eliminated from Illumina RNAseq reads with Trimmomatic(15) ...
-
bioRxiv - Genomics 2022Quote: ... or a high-density SNP array (HD: BovineHD BeadChip, Illumina Inc) and cows were genotyped with the BovineSNP50 Beadchip (Illumina Inc) ...
-
bioRxiv - Genomics 2021Quote: ... or a high-density SNP array (HD: BovineHD BeadChip, Illumina Inc) and most cows were genotyped with a low-density panel of approximately 6.9k SNPs overlapping with the standard-50K panel ...
-
bioRxiv - Genomics 2022Quote: ... or a high-density SNP array (HD: BovineHD BeadChip, Illumina Inc) and cows were genotyped with the BovineSNP50 Beadchip (Illumina Inc) ...
-
bioRxiv - Cell Biology 2020Quote: ... or low pass sequencing with a MiSeq nano kit (Illumina). Paired end 100 cycle sequencing was performed on a NovaSeq 6000 (Illumina).
-
bioRxiv - Microbiology 2022Quote: ... In order to distinguish the low frequency variants from Illumina sequence errors ...
-
bioRxiv - Microbiology 2022Quote: ... low-volume protocol based on the Nextera XT process (Illumina). Briefly ...
-
bioRxiv - Developmental Biology 2023Quote: ... or low pass sequencing with a MiSeq nano kit (Illumina) Paired end 100 cycle sequencing was performed on a NovaSeq 6000 (Illumina) ...
-
bioRxiv - Genomics 2020Quote: ... we used TruSeq Nano DNA Low Throughput Library Prep Kit (Illumina). Paired-end sequencing was performed on Illumina MiSeq using Reagent Kits v2 ...
-
bioRxiv - Evolutionary Biology 2021Quote: High-density genome-wide SNP array data sets (Illumina® BovineHD 777K BeadChip) corresponding to a total of 605 animals were obtained from published studies (Bahbahani et al ...
-
bioRxiv - Developmental Biology 2020Quote: ... Library preparation (SMARTer Ultra Low Input RNA for Illumina Sequencing - HV kit) and sequencing (Illumina HiSeq4000 ...
-
bioRxiv - Cancer Biology 2022Quote: ... Sequencing libraries were generated with low with input RNA Nextera protocol (Illumina, Nextera DNA Sample Preparation Kit ...
-
bioRxiv - Developmental Biology 2022Quote: ... Sequencing libraries were prepared using Nextera Sample low input kit (Illumina, 15028212) and sequenced using 75bp paired end reads on the Illumina Hiseq4000 platform ...
-
bioRxiv - Genomics 2022Quote: Low-quality and duplicated reads and adapter sequences were removed from Illumina transcript sequences using Trimmomatic ver ...
-
bioRxiv - Bioengineering 2023Quote: ... Sequencing reads were filtered to remove low-quality (Illumina average quality < 28) or unmapped reads and were genotyped ...
-
bioRxiv - Microbiology 2023Quote: ... Low quality reads were trimmed and adapter sequences were removed from Illumina sequences using bcl2fastq version 2.20.0.445 (RRID:SCR 015058 ...
-
bioRxiv - Evolutionary Biology 2020Quote: ... with modified protocol23 for improving low-input samples and sequenced with NextSeq500 (Illumina) as described above ...
-
bioRxiv - Immunology 2019Quote: ... according to the low sample protocol and run on Novaseq 6000 instrument (Illumina). GSEA was performed using the broad institute tool (Mootha et al. ...
-
bioRxiv - Cell Biology 2023Quote: ... RNA-seq libraries were prepared using TruSeq Stranded mRNA Low Sample kit (Illumina) according to manufacturer’s protocol ...
-
bioRxiv - Evolutionary Biology 2023Quote: We removed low-quality bases (Phred score below 25) and adaptors from Illumina reads ...
-
bioRxiv - Genomics 2022Quote: ... Bulls were genotyped with either a medium-density SNP array (50K: BovineSNP50 Beadchip, Illumina Inc) or a high-density SNP array (HD ...
-
bioRxiv - Genomics 2021Quote: ... Most bulls were genotyped with a medium-density SNP array (50K: BovineSNP50 Beadchip, Illumina Inc) or a high-density SNP array (HD ...
-
bioRxiv - Genomics 2022Quote: ... Bulls were genotyped with either a medium-density SNP array (50K: BovineSNP50 Beadchip, Illumina Inc) or a high-density SNP array (HD ...
-
bioRxiv - Evolutionary Biology 2021Quote: ... Individual genomic libraries were prepared using TruSeq DNA PCR-free Low Sample Kit (Illumina) and subsequently sequenced (150 bp paired-end ...
-
bioRxiv - Plant Biology 2019Quote: ... transcriptome libraries were prepared using TruSeq RNA Sample Preparation Low Throughput (LT) protocol (Illumina) as per the manufacturer’s guidelines and as reported previously [42] ...
-
bioRxiv - Evolutionary Biology 2022Quote: ... We also removed additional scaffolds that had low coverage (< 10x Illumina short-read converge).
-
bioRxiv - Evolutionary Biology 2022Quote: ... We also removed additional scaffolds that had low coverage (< 15x Illumina short-read converge). For M ...
-
bioRxiv - Microbiology 2022Quote: ... The two Illumina libraries were prepared with TruSeq Nano low-throughput (LT) kit (Illumina), generating inserts with an average size of 580 bp ...
-
bioRxiv - Cell Biology 2023Quote: ... Whole Genome Sequencing at low coverage was performed on either HiSeq 4000 machine (Illumina) to generate 150-bp paired-end reads ...
-
bioRxiv - Genomics 2020Quote: ... and genomic library construction (Illumina TruSeq DNA PCR-Free Low Throughput Library Prep Kit, Illumina). The generated paired-end libraries were quantified by qPCR (KAPA Library Quantification Kit ...
-
bioRxiv - Cell Biology 2021Quote: ... Samples were prepared using the TruSeq RNA Library Prep Kit v2 (low-sample protocol) (Illumina), validated using the High Sensitivity DNA assay (Agilent ...
-
bioRxiv - Cancer Biology 2022Quote: ... Library preparation and low-coverage sequencing were performed on an Illumina HiSeq 2500 platform (Illumina) using 50-base pair single-end reads ...
-
bioRxiv - Neuroscience 2023Quote: ... and converted to cDNA (NEBNext Single Cell/Low Input RNA Library Prep Kit for Illumina). cDNA from each sample was amplified and barcoded in a mild stringency PCR (20 cycles of 30 seconds at 98°C ...
-
bioRxiv - Genomics 2020Quote: ... All animals were genotyped using the high-density Illumina BovineHD BeadChip (Illumina, Inc., San Diego, CA, USA), comprising 777,962 SNPs ...
-
bioRxiv - Genomics 2020Quote: ... All other bulls (N = 3679) were genotyped at approximately 50,000 SNPs using medium density (MD) chips (e.g., the Illumina BovineSNP50 bead chip that comprises 54,001 (version 1 ...
-
bioRxiv - Genomics 2021Quote: ... The 50k genotypes were then imputed to the high-density Bovine SNP array (HD: BovineHD BeadChip, Illumina Inc) using a reference set of 2,700 animals with real HD genotypes ...
-
bioRxiv - Genomics 2020Quote: ... The animals were genotyped with the high-density Illumina BovineHD BeadChip array (Illumina Inc., San Diego, CA, USA) that contains 777,962 SNPs ...