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Citations for Illumina :
1 - 50 of 60 citations for Tissue Grinders since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Systems Biology 2019Quote: RNA-Seq of human individual tissues and mixture of 16 tissues (Illumina Body Map),
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bioRxiv - Microbiology 2019Quote: ... RNA libraries were multiplexed and run across 9 lanes (infected tissues) or 3 lanes (uninfected tissues) for paired end sequencing by Illumina HiSeq 2500 at the University of Wisconsin Biotechnology Center ...
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bioRxiv - Neuroscience 2022Quote: ... tissue was homogenised in Mammalian Polysome Buffer (Illumina) supplemented with DNAse I (10 U/mL) ...
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bioRxiv - Plant Biology 2021Quote: ... biological replicates for each of eleven tissue types from Illumina mRNA-seq libraries were aligned independently using STAR v2.5.3a (Dobin et al. ...
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bioRxiv - Cancer Biology 2023Quote: In this study,_whole tissue RNAseq was (Illumina Hiseq 2500) conducted on EMT6 orthotopically implanted mammary tumors in Balb/c mice treated with αPD-L1 or isotype control ...
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bioRxiv - Neuroscience 2022Quote: Tissue was processed using the TruSeq Ribo Profile (Mammalian) Kit (Illumina), according to the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: ... whole tissue RNA-seq (Illumina NextSeq500 with paired-end 75bp reads) were performed on 4T1 orthotopically implanted mammary tumors in 8-12 week (young ...
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bioRxiv - Genetics 2020Quote: ... Each donor tissue was genotyped on a dense array (Illumina Omni 2.5+Exome) and imputed to a common reference panel (1000 Genomes ...
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bioRxiv - Genomics 2023Quote: ... Tissue-specific libraries were sequenced PE150 on two lanes of NovaSeq 6000 (Illumina) (table S1) ...
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bioRxiv - Microbiology 2023Quote: ... jejuni NCTC12658 was isolated using Maxwell 16 Tissue DNA extraction kit (Promega) (Illumina sequencing) and the MagAttract HMW DNA kit (Qiagen ...
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bioRxiv - Genetics 2019Quote: ... We generated strand-specific libraries for tissues collected form the F1 crosses (TruSeq stranded Illumina) and non-strand-specific TruSeq libraries for the adult organs ...
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bioRxiv - Genomics 2019Quote: ... 50bp paired-end RNAseq data were produced from these tissues as well as genotypes from Illumina HumanHap300 and Illumina HumanHap610Q genotyping arrays ...
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bioRxiv - Genetics 2021Quote: ... We extracted the relative barcode abundances in input (AAV mixture) and output (tissue cDNAs) from Illumina data ...
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bioRxiv - Immunology 2021Quote: RNA extracted from cultured cells or caecum tissue was used for RNA-sequencing (150bp paired-end Illumina NovaSeq6000 sequencing ...
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bioRxiv - Molecular Biology 2021Quote: ... 5ug of RNA from individual tissues were treated with 15 units of RNAse R (Epicentre, Illumina, USA) for 15 minutes at 37 degrees Celsius ...
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bioRxiv - Cancer Biology 2023Quote: ... single cell RNAseq analysis on tumor tissues were conducted on an untreated patient biopsy (Illumina HiSeq 2500) and a patient biopsy at acquired resistance (unmatched ...
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bioRxiv - Immunology 2023Quote: ... A library was constructed per individual tissues with the TruSeq DNA PCR-Free Library Prep Kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2021Quote: ... four human CNV membranes and four human RPE-choroidal control tissues) were sequenced on the NextSeq 500 (Illumina) with 1 × 75 bp ...
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bioRxiv - Neuroscience 2022Quote: RNA sequencing of hippocampal tissue was carried out using TruSeq Stranded Total RNA kit and protocols (Illumina, US). A 1ug aliquot of total RNA from each hippocampus was prepared for RNA sequencing ...
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bioRxiv - Genomics 2022Quote: ... mRNA libraries were prepared for all nine tissue samples using the TruSeq Stranded mRNA sample preparation kit (Illumina) and run on an Illumina NovaSeq (2x 150 bp protocol).
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bioRxiv - Molecular Biology 2023Quote: ... as each clock was developed from a different pool of CpGs (e.g. the pan-tissue clock was developed from a pool of ∼21,000 CpGs common to all Illumina HumanMethylation arrays ...
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bioRxiv - Cancer Biology 2021Quote: ... Mini kit for DNA from cells and tissue (Macherey Nagel, Ref: 740952.50) and sequenced on a NovaSeq 6000 (Illumina) with a 100X depth.
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bioRxiv - Cancer Biology 2021Quote: ... 2019) that including normal tissue sampled adjacent to colorectal cancers that was profiled using the HumanMethylation450 BeadChip array (Illumina).
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bioRxiv - Immunology 2024Quote: ... RNAseq data of 4 databases covering 66 healthy tissues (Uhlen: n=122 individuals, n=32 tissues65; GTEx: n=1,315 individuals, n=53 tissues66; Illumina body map ...
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bioRxiv - Evolutionary Biology 2022Quote: ... we conducted RNA-seq library preparation with 1000 ng of total RNA per tissue sample as input and following the protocol of the Standard TruSeq Stranded mRNA Sample Prep Kit (Illumina) with indexing adapters ...
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bioRxiv - Genomics 2020Quote: ... to check for alias’s, gene summary (Entrez, Genecards and UniProtKB/Swiss-Prot) and mRNA expression in normal human tissues (GTEx, Illumina, BioGPS)
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bioRxiv - Genomics 2020Quote: ... 64 RNA-Seq libraries (4 time points x 4 tissues x 4 biological replicates) were prepared using the TruSeq RNA Sample Preparation Kit (Illumina). Libraries were sequenced on Illumina Nova-Seq 6000 sequencing platform at the Australian Genome Research Facility (AGRF ...
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bioRxiv - Neuroscience 2020Quote: Total RNA-seq libraries were prepared from homogenized left hippocampal-adjacent cortical tissue using the TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Gold (Illumina) according to manufacturer’s instructions ...
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bioRxiv - Neuroscience 2022Quote: Total RNAseq libraries were prepared from 1 microgram of total RNA from frozen brain tissue using the TruSeq Stranded Total RNA with Ribo-Zero Gold kit (Illumina) according to the protocol specifications ...
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bioRxiv - Developmental Biology 2020Quote: Pearson correlations were calculated among all genes across a catalog of 38 tissues/cell types derived from all three germ layers (16 Illumina BodyMap 2.0 tissues ...
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bioRxiv - Cancer Biology 2021Quote: ... Tumor DNA was isolated using the Qiagen Blood and Tissue Kit and sgRNA cassette was amplified similarly to the in vitro screen and analyzed by Illumina sequencing ...
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bioRxiv - Physiology 2020Quote: We prepared libraries using DNA extracted from the tumor tissue and buffy coat with the TruSeq Nano DNA Library Prep Kit (Illumina). Paired-end (2 × 75 bp ...
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bioRxiv - Molecular Biology 2020Quote: ... RNA-seq for the mouse heart tissues were performed using next generation high throughput sequencing method (Illumina HiSeq 2000, Illumina). Total RNAs were isolated ...
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bioRxiv - Molecular Biology 2020Quote: ... RNA-seq for the mouse heart tissues were performed using next generation high throughput sequencing method (Illumina HiSeq 2000, Illumina). Total RNAs were isolated ...
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bioRxiv - Microbiology 2020Quote: DNA were extracted by QIAGEN DNeasy Blood and Tissue Kit and sequencing libraries were prepared using the Nextera XT kit and sequenced on a MiSeq (Illumina) using v3 reagents with 2 × 300 cycles ...
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bioRxiv - Cancer Biology 2021Quote: cDNA from tonsil and breast cancer tissue microregion samples were prepared into sequencing libraries using Nextera XT library preparation (Illumina), while cDNA from melanoma microregion libraries were prepared with ThruPLEX DNA-seq Kit (Takara Bio) ...
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bioRxiv - Genomics 2020Quote: RNA from a subset of human fetal (n = 3) and mouse (n = 8) cortex tissue samples was prepared with TruSeq Stranded mRNA Sample Prep Kit (Illumina) and subjected to 125bp paired-end sequencing using a HiSeq2500 (Illumina) ...
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bioRxiv - Plant Biology 2023Quote: ... 250ng of total RNA from mature pollen and 1000 nanograms of total RNA from inflorescences or leaf tissues were used for RNA-seq library preparation with TruSeq Stranded mRNA kit (Illumina). The final library was sequenced on Illumina NovaSeq 6000 or HiSeq 4000 instruments.
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bioRxiv - Cancer Biology 2022Quote: ... Libraries were sequenced as paired-end 101 bp (tumoroid samples) or paired-end 81 bp (original tumor tissues) reads on a NovaSeq 6000 (Illumina) platform at ~30M reads/sample ...
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bioRxiv - Molecular Biology 2021Quote: Libraries from human liver tissue and wild type FL83B cells were prepared with TruSeq Stranded Total RNA Library Prep Gold (Illumina, #20020599), single-read sequencing was performed using the NextSeq 500 (Illumina) ...
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bioRxiv - Genomics 2019Quote: ... Short read RNA-Seq libraries were also prepared for all nine tissue using TruSeq stranded mRNA LT kits and supplied protocol (Illumina, CA), and sequenced on a NextSeq500 platform using v2 sequencing chemistry to generate 2 x 75 bp paired-end reads.
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bioRxiv - Genomics 2022Quote: ... RNAseq libraries were constructed from all reference tissues at the University of Montana using an Illumina TruSeq Stranded mRNA library kit (Illumina, 20020595), following manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: ... Array-based tissue methylation profiling was performed by following the instructions of the Infinium MethylationEPIC BeadChIP Kit (Illumina, WG-317-1002). Briefly ...
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bioRxiv - Neuroscience 2020Quote: ... Detailed anatomical boundaries for each cortical region at each stage of development are provided elsewhere.[17,18] Regional tissue samples were subject to mRNA-sequencing using an Illumina Genome Analyzer IIx (Illumina, San Diego, CA) and mRNA-seq data processed using RSEQtools (v0.5).[123] Gene expression was measured as reads per kilobase of transcript per million mapped reads (RPKM) ...
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bioRxiv - Genomics 2021Quote: ... The best replicate from each tissue was selected for the transcriptome data set by preparing TrueSeq libraries (Illumina, San Diego, CA, USA). The rest of the samples were prepared with the Lexogen QuantSeq 3’mRNA kit (Lexogen ...
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bioRxiv - Genomics 2020Quote: ... Samples were prepared separately from each of the three biological replicates of each tissue type using the TruSeqTM RNA Sample Preparation Kits (v2) and sequenced using the Illumina HiSeq 2500 instrument (Illumina Inc., USA) at the Center for Genomic Research and Biocomputing ...
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bioRxiv - Immunology 2021Quote: Total RNA was extracted from experimental tissue samples and sequencing libraries were prepared by the Illumina Nextera XT method following manufacturer’s recommendations (Illumina, San Diego, CA). The multiplexed libraries were sequenced in a NextSeq500 instrument in 150 bp paired end mode ...
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bioRxiv - Genomics 2023Quote: ... These five tissue-specific samples were subjected to Illumina’s TruSeq Stranded mRNA library preparation kit and sequenced on NovaSeq 6000 (Illumina, 2×150 bp). For long-read RNA sequencing ...
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bioRxiv - Neuroscience 2019Quote: ... Tissue RNA-seq was generated using the TruSeq RNA Sample Preparation Kit v2 and Ribo-Zero rRNA removal kit (Illumina, San Diego, CA). For RNA-seq data processing ...
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bioRxiv - Physiology 2023Quote: ... All libraries within a tissue type were pooled to equimolar amounts and sequenced on two lanes of an Illumina NovaSeq (Illumina, San Diego, CA) machine to obtain 150 bp paired-end reads.