Labshake search
Citations for Illumina :
1 - 50 of 1381 citations for SARS CoV 2 Nucleoprotein His tag E. coli since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Synthetic Biology 2022Quote: ... using Qiagen RNeasy Plus kit.200ng of extracted RNA was used to produce SARS-CoV-2 amplicon libraries using the NEBNext SARS-CoV-2 FS Library Prep Kit (Illumina) using the VarSkip Short Express Protocol with 25 minutes fragmentation step and 8 cycles of PCR enrichment ...
-
bioRxiv - Genomics 2020Quote: ... with the respiratory virus oligo panel including SARS-CoV-2 probes (Illumina, San Diego ...
-
bioRxiv - Microbiology 2022Quote: ... SARS-CoV-2 stocks were deep sequenced on a MiSeq platform (Illumina). SARS-CoV-2 whole-genome amplicon-based sequencing was conducted by adapting an existing whole genome sequencing pipeline for poliovirus genotyping as described (Wang et al. ...
-
bioRxiv - Microbiology 2021Quote: All SARS-CoV-2 stocks were deep sequenced on a MiSeq platform (Illumina).
-
bioRxiv - Microbiology 2022Quote: ... whole SARS-CoV-2 genome cDNA libraries were generated using a MiniSeq system (Illumina) with a MiniSeq mid-output kit ...
-
bioRxiv - Molecular Biology 2022Quote: The whole genome sequencing of SARS-CoV-2 was performed on MiSeq System (Illumina technology), that is installed at R’VRDL ...
-
bioRxiv - Microbiology 2022Quote: ... The quality of paired-end reads obtained from MiSeq sequencing was analyzed by using Qiagen CLC Genomics Workbench 22.0.1 and the Identify ARTIC V3 SARS-CoV-2 Low Frequency and Shared Variants (Illumina) workflow was used in genetic variant analyses ...
-
bioRxiv - Microbiology 2020Quote: ... At Gdansk two independent protocols were used for SARS-CoV-2 genome sequencing: Illumina RNA prep with enrichment for respiratory virus oligos panel V2 followed by Illumina MiniSeq medium output run that produced 150-nucleotide paired-end reads ...
-
bioRxiv - Immunology 2022Quote: ... a multiplexed amplicon-based whole-viral-genome approach using the NEBNext® ARTIC SARS-CoV-2 Library Prep Kit (Illumina®) was employed (New England Biolabs ...
-
bioRxiv - Microbiology 2021Quote: ... Library preparation of amplified SARS-CoV-2 DNA for sequencing was performed using a Nextera XT library prep kit (Illumina Inc.) following the manufacturer’s protocol ...
-
bioRxiv - Microbiology 2021Quote: ... Library preparation of amplified SARS-CoV-2 DNA for sequencing was performed using a Nextera XT library prep kit (Illumina Inc.) following the manufacturer’s protocol ...
-
bioRxiv - Genomics 2021Quote: ... DNA fragments of the SARS CoV-2 genome were hybridized with biotinylated respiratory virus oligos (Illumina Inc., San Diego, CA, USA). The DNA fragments hybridized with the custom oligos were captured using streptavidin magnetic beads ...
-
bioRxiv - Immunology 2021Quote: ... commercial reagents were used for unique dual indexed amplicon library generation according to the Artic protocol (NEBNext® ARTIC SARS-CoV-2 Library Prep Kit (Illumina®)) ...
-
bioRxiv - Microbiology 2022Quote: ... and variant calling as described by the software manufacturer (https://help.geneious.com/hc/en-us/articles/360045070991-Assembly-of-SARS-CoV-2-genomes-from-tiled-amplicon-Illumina-sequencing-using-Geneious-Prime). For each sample ...
-
bioRxiv - Microbiology 2023Quote: ... cDNA was amplified using ARTIC v4 primer pools (https://github.com/artic-network/artic-ncov2019) and variant calling results were generated using the SIGNAL (SARS-CoV-2 Illumina GeNome Assembly Line) pipeline v1.5.0 42 ...
-
bioRxiv - Genomics 2023Quote: ... and Hi-C (Illumina NovaSeq 6000, 2×150bp) for chromosome-level scaffolding (Fig ...
-
bioRxiv - Evolutionary Biology 2020Quote: ... raw sequence data were filtered for contaminants (E. coli, PhiX, Illumina adaptors or primers) and low quality reads using bowtie2_db (Langmead & Salzberg ...
-
bioRxiv - Plant Biology 2024Quote: ... and second strand synthesis buffer (containing dNTPs, RNase H and E. coli polymerase I, Illumina) was added so that the second strand was produced by nick-translation ...
-
bioRxiv - Cancer Biology 2022Quote: ... Hi-C libraries were sequenced 2×150bp on a NovaSeq 6000 instrument (Illumina). Juicer were used to process raw reads and generate Hi-C contact matrices (.hic files) ...
-
bioRxiv - Molecular Biology 2024Quote: ... coli (Illumina) was added (10U/sample ...
-
bioRxiv - Genomics 2019Quote: ... Hi-C libraries were sequenced on a NextSeq 550 apparatus (2 × 75 bp, paired-end Illumina NextSeq with the first ten bases acting as barcodes ...
-
bioRxiv - Evolutionary Biology 2020Quote: ... Hi-C libraries were sequenced on a NextSeq 550 sequencer (2×75 bp, paired-end Illumina NextSeq with the first ten bases acting as barcodes50).
-
bioRxiv - Developmental Biology 2021Quote: ... Paired-end 2 x 75 bp NSQ 500/550 Hi Output KT v2.5 −75 CYS (Illumina, 20024906) was performed for RNA-seq libraries on an Illumina Nextseq 500 instrument ...
-
bioRxiv - Genomics 2022Quote: ... Hi-C libraries were sequenced on a NextSeq 550 apparatus (2 × 75 bp, paired-end Illumina NextSeq). Contact maps were generated from reads using the hicstuff pipeline for processing generic 3C data ...
-
bioRxiv - Genomics 2022Quote: ... and DpnII and HindIII Hi-C material was sequenced (2×50 nt) on a HiSeq 4000 (Illumina) following the manufacturer’s instructions) ...
-
bioRxiv - Evolutionary Biology 2022Quote: ... and sequencing (Illumina Hi-Seq) were performed by Iridian Genomes ...
-
bioRxiv - Genetics 2022Quote: ... For NGS (Illumina Hi seq), these quantified DNA samples were sent to the Novo gene (leading-edge genomics services and solutions).
-
bioRxiv - Developmental Biology 2023Quote: ... CUT&Tag assay was performed using NovoNGS CUT&Tag 3.0 High-Sensitivity Kit (for Illumina, Novoprotein scientific Inc. ...
-
bioRxiv - Genetics 2021Quote: ... coli strain (Illumina technologies). The library titled 7.600 cfu/mL with an average size of inserts of 35 Kb ...
-
bioRxiv - Genomics 2020Quote: ... and Hi-C sequencing (Illumina sequencing). The tissue samples were stored in liquid nitrogen before sequencing ...
-
bioRxiv - Genomics 2019Quote: Raw Nanopore and Hi-C (Illumina) reads have been deposited in the NCBI SRA and are under the BioProject (PRJNA565796) ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... as well as Hi-C (Illumina) chromatin interaction data ...
-
bioRxiv - Molecular Biology 2020Quote: ... pooled and sequenced (Hi-Seq 4000, Illumina). Reads from the sequencer were demultiplexed using bcl2fastq (v2.20.0) ...
-
bioRxiv - Molecular Biology 2020Quote: ... pooled and sequenced (Hi-Seq 2500, Illumina). Reads from the sequencer were demultiplexed using bcl2fastq (v2.20.0) ...
-
bioRxiv - Evolutionary Biology 2022Quote: ... Hi-C sequencing was performed by Illumina HiSeq 2500 platform ...
-
bioRxiv - Neuroscience 2023Quote: ... Libraries were sequenced on Hi-Seq2500 (Illumina) obtaining 2×50 paired-end reads ...
-
bioRxiv - Cancer Biology 2021Quote: Long read ChIA-PET was performed using Tn5 transposase to tag DNA for long tag sequencing by Illumina NextSeq ...
-
bioRxiv - Plant Biology 2019Quote: Summary of SuperSAGE tags generated by Illumina sequencing of D ...
-
bioRxiv - Genomics 2020Quote: ... and E-Risk Study and from Illumina EPIC 850k Arrays in the Understanding Society study and the CALERIE Trial ...
-
bioRxiv - Microbiology 2021Quote: ... coli isolates were determined by Illumina sequencers (25) ...
-
bioRxiv - Cancer Biology 2021Quote: ... All Hi-C libraries were sequenced by Illumina sequencing ...
-
bioRxiv - Immunology 2023Quote: ... Samples were sequenced on HI-Seq 2500 (Illumina). 11 nucleotide adaptors were trimmed from each read and resultant sequences were aligned to the mm10 genome using bowtie2 (Langmead and Salzberg ...
-
bioRxiv - Immunology 2024Quote: ... then sequenced using Hi-seq 4000 sequencer (Illumina).
-
bioRxiv - Microbiology 2023Quote: ... a tag-encoded MiSeq-based (Illumina, CA, USA) high throughput sequencing was performed ...
-
bioRxiv - Immunology 2019Quote: ... and sequenced on an Hi-Seq 2500 platform (Illumina).
-
bioRxiv - Molecular Biology 2022Quote: ... The sequencing was processed on Hi-SEQ 2000 (Illumina) as single-end 50 base reads ...
-
bioRxiv - Pathology 2024Quote: ... insecticola (E, F) based on SNPs identified from Illumina sequencing ...
-
bioRxiv - Genetics 2022Quote: ... were analyzed by Illumina Hi-Seq 2500 system (Illumina, Inc., San Diego, CA, USA).
-
bioRxiv - Genomics 2022Quote: ... The Hi-C library was amplified using PE primers (Illumina) with 10 PCR amplification cycles ...
-
bioRxiv - Pharmacology and Toxicology 2021Quote: ... with NSQ 500 hi-Output KT v2 (75 CTS, Illumina). The sequencing reads were aligned to the GRCm38 v84 Ensembl Mus musculus genome using STAR v.2.5.2a with default parameters ...