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Citations for Illumina :
1 - 50 of 352 citations for Recombinant Human C mer Proto Oncogene Tyrosine Kinase since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2022Quote: ... K-mers from Illumina read data were counted ...
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bioRxiv - Genomics 2020Quote: ... Erroneous k-mers from Illumina paired-end reads were removed using rCorrector [91] ...
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bioRxiv - Genomics 2023Quote: Genome size was estimated by K-mer (17-mer) analysis using reads generated by Illumina Hiseq sequencing according to Lander-waterman theory ...
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bioRxiv - Molecular Biology 2023Quote: ... K-mer filtering (which removes reads with a 31-mer match to an Illumina spike-in), and Entropy filtering (>0.90 ...
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bioRxiv - Genomics 2021Quote: ... K-mer based analysis from Illumina sequencing data derived from the Rothamsted population also indicated a genome size from 3,400 Mb to 3,550 Mb ...
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bioRxiv - Genomics 2022Quote: We collected 21-mers from Illumina reads of HG002 (250bp paired-end ...
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bioRxiv - Genomics 2020Quote: ... so k-mers were collected later from Illumina whole genome sequencing reads instead ...
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bioRxiv - Genomics 2023Quote: ... a 51-bp k-mer matrix from Illumina paired raw reads of 136 lablab accessions was created using Jellyfish (v ...
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bioRxiv - Genomics 2021Quote: ... platform = c(”Illumina Human Methylation 450”), and sample.type = c(”Primary solid Tumor”,”Solid Tissue Normal”) ...
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bioRxiv - Genomics 2021Quote: ... First a k-mer profile was generated from Illumina reads using jellyfish 2.3.0 tools (Marçais & Kingsford 2011 ...
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bioRxiv - Plant Biology 2021Quote: ... a K-mer frequency distribution was generated from Illumina 2×150 bp paired reads (described below ...
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bioRxiv - Developmental Biology 2019Quote: ... ChIP-seq libraries were sequenced as single-end 75-mers by Illumina NextSeq 500 ...
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bioRxiv - Genomics 2022Quote: ... The variants were filtered with Merfin using k-mers derived from Illumina short reads ...
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bioRxiv - Microbiology 2021Quote: ... The final purified product was quantified using qPCR according to the qPCR Quantification Proto-col Guide (KAPA Library Quantification kits for Illumina Sequencing platforms) and qualified using the LabChip GX HT DNA High Sensitivity Kit (PerkinElmer ...
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bioRxiv - Genomics 2021Quote: ... and a similar k-mer distribution pattern to GenomeScope2 (performed with Illumina PE reads). Additionally ...
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bioRxiv - Microbiology 2021Quote: ... MERS-CoV samples were treated with RiboZero H/M/R rRNA (Illumina, San Diego, CA) depletion mix following the manufacturer’s instructions ...
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bioRxiv - Genomics 2021Quote: We downloaded publicly-available Hi-C data from human prefrontal cortex tissue23,24 (Illumina HiSeq 2000 paired-end raw sequence reads ...
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bioRxiv - Genomics 2023Quote: ... (Marçais and Kingsford, 2011) and Genomescope (v2.0) (max k-mer coverage = 1,000,000) (Ranallo-Benavidez et al., 2020) from Illumina short reads ...
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bioRxiv - Genomics 2020Quote: The genome size was estimated using the k-mer histogram method with Kmergenie v1.7051 (Chikhi and Medvedev 2014) from Illumina data.
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bioRxiv - Microbiology 2020Quote: ... Sequencing libraries were prepared using Nextera XT reagents and sequenced on a MiSeq using a 2×250-mer paired-end v2 flow cell and manufacturer’s protocols (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... for 1[h at 60°C and was subsequently PCR amplified using the primers 5′-AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTC-3′ and 5′-CAAGCAGAAGACGGCATACGAGATJJJJJJGTGACTGGAGTTCAGACGTGTG-3′(where Js indicates the 6-mer index sequence for Illumina sequencing).
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bioRxiv - Biochemistry 2024Quote: ... a T7 promoter-containing oligonucleotide was annealed to an equimolar quantity of RBNS T7 template oligonucleotide (a random 20-mer flanked by partial Illumina adapters). 500 fmol template were transcribed overnight at 37°C with 200 mM Tris-HCl pH 8.0 ...
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bioRxiv - Microbiology 2023Quote: ... Contaminant removal was then carried out to filter out all reads that have a 31-mer match to PhiX (a common Illumina spikein) allowing one mismatch ...
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bioRxiv - Biochemistry 2024Quote: As template a T7 promoter-containing oligonucleotide was annealed to an equimolar quantity of RBNS T7 template oligonucleotide (a random 20-mer flanked by partial Illumina primers). 500 fmol template were transcribed overnight at 37°C with 200 mM Tris-HCl pH 8.0 ...
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Human CCR6+ Th cells show both an extended stable gradient of Th17 activity and imprinted plasticitybioRxiv - Immunology 2023Quote: ... The resulting cRNA samples were hybridized to an Illumina Human WG6 Expression BeadChip array for 14-20 hour at 58°C in an Illumina Hybridization Oven (Illumina Inc.). Arrays were washed and scanned following the protocols in the Illumina Whole-Genome Gene Expression Direct Hybridization Assay Guide (Illumina) ...
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bioRxiv - Molecular Biology 2020Quote: ... Human/Mouse/Rat (Illumina, discontinued), and fragmented by incubating with PNK buffer (NEB ...
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bioRxiv - Plant Biology 2020Quote: ... The 16 to 42-nt fraction was isolated by electrophoresis and treated with T4 polynucleotide kinase before library preparation using the TruSeq Small RNA Library Preparation Kit (Illumina). Sequencing was performed on the HiSeq 4000 platform (Illumina).
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bioRxiv - Microbiology 2023Quote: ... C and D (Illumina). Amplicon concentration across samples was normalized to 200 ng/μl using the Qubit high sensitivity dsDNA assay before pooling ...
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bioRxiv - Genomics 2021Quote: ... four human CNV membranes and four human RPE-choroidal control tissues) were sequenced on the NextSeq 500 (Illumina) with 1 × 75 bp ...
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bioRxiv - Microbiology 2021Quote: ... 5) DC3000 + C (Illumina only), 6 ...
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bioRxiv - Microbiology 2021Quote: ... 9) DC3000 − C (Illumina only), 10 ...
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bioRxiv - Synthetic Biology 2023Quote: ... The resultant recombinants containing known donor barcodes and unknown recipient barcodes were sequenced by Illumina MiSeq platform ...
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bioRxiv - Genomics 2021Quote: BD Infinium Human Methylation 450 arrays (Illumina) were retrieved from the European Genome-phenome Archive (EGA ...
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bioRxiv - Molecular Biology 2020Quote: ... Human Ribo-Zero rRNA depletion kit (Illumina). Paired-end 150+150 bp sequencing was done with Illumina NextSeq 500 using NextSeq 500/550 High Output Kit v2.5 for HeLa samples and with Illumina NovaSeq 6000 using partial S4 flow cell lane for patient samples.
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bioRxiv - Neuroscience 2022Quote: ... A Human OmniExpress v1.2 BeadChip array (Illumina) was used post-editing to check for any gross karyotype abnormalities ...
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bioRxiv - Molecular Biology 2023Quote: ... Human Ribo-Zero rRNA depletion kit (Illumina). Paired-end 150+150 bp sequencing was performed at the Institute for Molecular Medicine Finland FIMM Genomics unit with Illumina NovaSeq 6000 using partial S4 flow cell lane ...
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bioRxiv - Genomics 2020Quote: ... and Hi-C sequencing (Illumina sequencing). The tissue samples were stored in liquid nitrogen before sequencing ...
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bioRxiv - Genomics 2019Quote: Raw Nanopore and Hi-C (Illumina) reads have been deposited in the NCBI SRA and are under the BioProject (PRJNA565796) ...
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bioRxiv - Evolutionary Biology 2023Quote: ... as well as Hi-C (Illumina) chromatin interaction data ...
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bioRxiv - Cancer Biology 2019Quote: DNA methylation data (Illumina human methylation 450k BeadChip) and clinical information of 8,118 patients across 24 tissue types were obtained from in GDC data portal [29] using TCGAbiolink (Bioconductor package ...
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bioRxiv - Neuroscience 2022Quote: ... Ribo-Zero Gold (Human/Mouse/Rat) Kit (Illumina; NEBNext® rRNA Depletion Kit (Human/Mouse/Rat)(E6350 ...
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bioRxiv - Microbiology 2023Quote: ... ‘human/mouse’ and ‘bacteria’ Ribo-Zero kits (Illumina). RNA quality and concentration were verified by BioAnalyzer (Agilent Technologies ...
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bioRxiv - Genetics 2024Quote: The Infinium Human Methylation EPIC BeadChip (Illumina, USA) array was performed according to manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2024Quote: ... and Methylation data (Illumina Human Methylation 450 platform) for TCGA cohorts were downloaded from the Firebrowse website hosed by Broad Institute of MIT and Harvard ...
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bioRxiv - Genomics 2020Quote: ... Human libraries were sequenced on a NovaSeq 6000 (Illumina) and mouse libraries on a NextSeq 500 (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... mRNA expression log intensity levels (Illumina Human v3 microarray) were used as the expression levels of the genes ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Hi-C sequencing was performed by Illumina HiSeq 2500 platform ...
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bioRxiv - Cancer Biology 2021Quote: The Illumina Infinium Human Methylation 450k BeadChip (Illumina 450K array) prostate adenocarcinoma dataset was downloaded from the TCGA consortium database ...
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bioRxiv - Genetics 2019Quote: ... and genotyped on the Infinium Human CoreExome-24 BeadChip (Illumina). Variants missing >5% of total genotypes and variants that deviated from Hardy-Weinberg equilibrium were removed ...
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bioRxiv - Cancer Biology 2019Quote: ... and TruSeq Stranded Total RNA Human/Mouse/Rat (Illumina, 20020596) with 100 ng of input and 13 PCR cycles ...