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Citations for Illumina :
1 - 50 of 147 citations for Rat Cytokine Microarray since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2020Quote: ... hybridized to Infinium MethylationEPIC microarrays (Illumina), and scanned using an iScan (Illumina) ...
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bioRxiv - Physiology 2021Quote: ... Microarray data were analyzed by Illumina Genomestudio software (v2011.1) ...
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bioRxiv - Physiology 2022Quote: ... Eighteen microarray studies (Affymetrix and Illumina platforms), encompassing 570 samples were analyzed ...
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bioRxiv - Cancer Biology 2021Quote: ... five microarray data sets that were quantified by Illumina beadchip were combined as the MIBC-ILLUMINA cohort ...
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bioRxiv - Systems Biology 2021Quote: We annotated the manufacturing IDs (probes from microarray/Illumina) to their corresponding gene alias ...
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bioRxiv - Immunology 2020Quote: ... Microarray was performed using the HumanHT-12 beadchip (Illumina, Inc. ...
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bioRxiv - Cancer Biology 2023Quote: ... mRNA expression log intensity levels (Illumina Human v3 microarray) were used as the expression levels of the genes ...
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bioRxiv - Cancer Biology 2023Quote: ... and a microarray-based technology (Illumina HT-12 arrays) (30 ...
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bioRxiv - Genomics 2020Quote: ... SNP-microarray using the HumanCytoSNP12 BeadChip platform (Illumina, San Diego, CA), which assesses approximately 300,000 polymorphic loci ...
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bioRxiv - Cancer Biology 2020Quote: The DNA methylation data (produced by the methylation microarray HumanMethylation450 (Illumina)) of tumors and normal tissue controls were downloaded from the GDC data portal (http://portal.gdc.cancer.gov/ ...
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bioRxiv - Cancer Biology 2023Quote: Gene expression data (cDNA microarray profiling, Illumina HT-12 v3 platform) from Molecular Taxonomy of BRCA International Consortium (METABRIC ...
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bioRxiv - Cell Biology 2023Quote: ... The OvineSNP50 Beadchip a high throughput microarray system developed by Illumina in collaboration with the International Sheep Genomics Consortium (ISGS) ...
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bioRxiv - Cancer Biology 2020Quote: ... Microarray analysis was performed using 1,000ng of RNA per manufacturer’s guidelines (Illumina). HumanHT12 (48,000 probes ...
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bioRxiv - Systems Biology 2023Quote: ... and hybridized to HumanHT-12 v4 BeadChip microarrays (Illumina, BD-901-1001) as described previously20 ...
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bioRxiv - Genomics 2023Quote: ... 4 out of 49 samples only had microarray genotype data from Illumina Omni2.5 chips ...
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bioRxiv - Genomics 2020Quote: ... The microarray analysis was performed using Illumina Infinium HumanMethylation27 Bead-Chips (Illumina Inc.), which contains 27,578 highly informative CpG sites covering more than 14,000 human RefSeq genes ...
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bioRxiv - Bioengineering 2022Quote: ... Scanning of the microarrays was performed on Illumina HiScan (Illumina, SY-103-1001). No signal was observed on human-specific microarrays using similar amounts of RNA/cRNA from connective tissue isolated in the immediate periphery of the implants ...
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bioRxiv - Neuroscience 2020Quote: ... CDK5RAP2: rs10984186) were determined using pyrosequencing (PyroMark24 or PyroMark96) or DNA microarray (Illumina) and are shared in the registered repository.
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bioRxiv - Genomics 2020Quote: ... Samples were genotyped using two different Illumina microarrays (Illumina, San Diego, CA, USA). One subsample (HeiDE1 ...
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bioRxiv - Cancer Biology 2020Quote: ... Klijn 2015 SNP and CNV data were identified from SNP microarray analysis (Illumina HumanOmni2.5_4v1). The provided SNPs had been previously filtered to include only missense and nonsense mutations ...
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bioRxiv - Physiology 2022Quote: ... 1A was obtained by DNA microarray using MouseWG-6 v2.0 Gene Expression BeadChips (Illumina).
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bioRxiv - Genetics 2019Quote: ... and rat (Illumina). RNAs longer than 200 nt were selectively recovered using the RNA Clean & Concentrator-5 kit (Zymo Research) ...
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bioRxiv - Systems Biology 2020Quote: ... Expression in cohort 1 was measured using HumanHT-12 v4 Expression Beadchip microarrays (Illumina, Inc.) with ∼44k probes ...
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bioRxiv - Pathology 2021Quote: ... Gene expression microarray analysis was performed with mouse Sentrix® BeadChips (Illumina; San Diego, CA). We followed the workflow established by the manufacturer ...
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bioRxiv - Genomics 2019Quote: Genomic DNA (gDNA) samples from probands were analyzed with whole-genome SNP microarray (HumanOmni2.5 BeadChip, Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2022Quote: Global DNA methylation was measured on 512 samples using the Illumina EPIC microarray (Illumina, San Diego). Arrays were run at the UCLA Neuroscience Genomic Core (UNGC) ...
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bioRxiv - Molecular Biology 2019Quote: ... mRNA expression levels were extracted from microarray analyses performed on a Human HT-12-v4 BeadChip (Illumina) after labeling (Ambion ...
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bioRxiv - Genetics 2019Quote: We generated an independent CNV callset for validation purpose using SNP microarray genotyping data generated from Illumina InfiniumCoreExome-24_v1.1 ...
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bioRxiv - Genomics 2021Quote: ... We validated our genotypes with 58 SNPs used for quality control with the MethylationEPIC BeadChip microarray (Illumina) [62] ...
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bioRxiv - Cell Biology 2023Quote: ... and read by an iScan microarray scanner according to the manufacturer’s instructions (Illumina, San Diego, CA, USA). Values under 130 relative fluorescence units (RFUs ...
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bioRxiv - Molecular Biology 2020Quote: ... Human/Mouse/Rat (Illumina, discontinued), and fragmented by incubating with PNK buffer (NEB ...
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bioRxiv - Genomics 2019Quote: ... mouse and rat (Illumina, USA). Sequencing has been done with 2×250 bp paired-end on a HiSeq 2500 (Illumina ...
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bioRxiv - Genetics 2021Quote: Microarray genotyping analyses were carried out following manufacturer-recommended standard protocols for the Illumina XT platform (Illumina, Inc.). All genotype data from samples with call rates below 98% of the analyzed markers were discarded in order to ensure high quality data ...
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bioRxiv - Genomics 2020Quote: ... Genome-wide genotyping of 200 ng genomic DNA from the remaining 207 patients was carried out using Infinium HumanOmni2.5-8 v1.2 BeadChip microarrays (Illumina). After completion of the assay ...
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bioRxiv - Immunology 2020Quote: ... Microarray was performed using the HumanHT-12 beadchip (Illumina, Inc., 5200 Illumina Way San Diego, CA 92122 USA) and scanned using an iScan array scanner ...
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bioRxiv - Cancer Biology 2022Quote: ... The DNA methylation status of more than 450,000 CpG sites was interrogated using the Infinium HumanMethylation450 microarray (Illumina). Preprocessing and normalization involved steps of probe filtering ...
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bioRxiv - Cell Biology 2024Quote: ... 1.2 µg of DNA were bisulfite converted and analyzed using the EPIC BeadChip microarray (Illumina, San Diego, USA) by Life & Brain company (Bonn ...
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bioRxiv - Molecular Biology 2022Quote: ... Sanger sequencing validation of genotypes (Figure S1B and S1C) (primers listed in Table S3) and CNV microarray analysis (Illumina Bead Array ...
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bioRxiv - Genetics 2021Quote: DNA samples have been obtained from 12,500 individuals and genotyped on one of two DNA microarrays (Affymetrix GeneChip 6.0 or Illumina HumanOmniExpressExome chips). After stringent quality control ...
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bioRxiv - Neuroscience 2020Quote: ... we included 45 AD cases with both the DNA methylation data at cg05157625 and microarray-based gene expression data from their temporal cortex (Illumina)12,13.
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bioRxiv - Genomics 2022Quote: ... The bisulfite converted sperm DNA was hybridized to Illumina Infinium HumanMethylationEPIC microarrays and ran as recommended by the manufacturer (Illumina) at Infinity BiologiX.
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bioRxiv - Genetics 2022Quote: ... Common bi-allelic SNP genotyping was performed using Illumina Global Screening Array SNP-microarray technology (Illumina, San Diego, California, USA). Genotype assignment from the microarray fluorescence data was performed using Illumina’s Genome Studio software.
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bioRxiv - Cancer Biology 2022Quote: ... The microarray gene expression data from a total of 24 arrays were analysed in GenomeStudio software (Illumina, Little Chesterford, UK) with background subtraction from experiments that were performed with Tet-inducible BJAB cells expressing Mock control ...
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bioRxiv - Molecular Biology 2021Quote: ... the mRNA expression data in z-scores relative to all samples (log microarray) carried out on the Illumina HT-12 v3 platform (Illumina_Human_WG-v3) (32 ...
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bioRxiv - Cancer Biology 2019Quote: We assessed genome-wide DNA methylation in seven tumor samples with the Illumina Methylation EPIC microarray (Illumina, San Diego, CA, USA). DNA methylation assays were performed as per the standard manufacturer’s protocol by MWG (Aros – Denmark) ...
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bioRxiv - Cancer Biology 2020Quote: ... We used summarized log-scale intensities representing copy number profiles generated by combining probe intensities from four platforms (Agilent Human Genome CGH Microarray 44A, Nimblegen HG19 CGH 385K WG Tiling v2.0, Affymetrix GeneChip Human Mapping 500k Array Set and Illumina Human1Mv1_C BeadChip). A threshold of ≥ 0.9 and ≤ -0.9 was used to call copy number gains and losses ...
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bioRxiv - Neuroscience 2021Quote: ... Genotyping was performed using single nucleotide polymorphism (SNP) microarrays (Infinium Global Screening Array v2.4. or Infinium OmniExpress-24; Illumina, San Diego, CA). Raw genotype files were converted to PLINK-compatible files using GenomeStudio software (Illumina ...
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bioRxiv - Pathology 2021Quote: Genotyping was performed using single nucleotide polymorphism (SNP) microarrays (Infinium Global Screening Array v2.4. or the Infinium OmniExpress-24, Illumina, San Diego CA). Raw genotype files were converted to PLINK-compatible files using GenomeStudio software (Illumina ...
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bioRxiv - Genetics 2021Quote: ... DNAm was then measured at 485,577 CpG sites across the genome using the Illumina Infinium Human Methylation 450K BeadChip microarray (Illumina, San Diego, CA). We received two versions of the DNAm data ...
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bioRxiv - Neuroscience 2022Quote: ... Ribo-Zero Gold (Human/Mouse/Rat) Kit (Illumina; NEBNext® rRNA Depletion Kit (Human/Mouse/Rat)(E6350 ...