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Citations for Illumina :
1 - 50 of 172 citations for Mouse IRX6 shRNA Plasmid since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2024Quote: Libraries were constructed from 500 ng of total RNAs isolated from 4T1 (scrambled vs Tlr7 shRNA) using the TruSeq RNA Library Prep Kit (Illumina). Constructed libraries were sequenced using Illumina NextSeq (High Output ...
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bioRxiv - Genomics 2023Quote: ... Reconstruction of plasmids from Illumina reads was performed using PLACNETw(51).
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bioRxiv - Developmental Biology 2024Quote: ... and all plasmids were verified by Illumina sequencing before being used to transform plants via the floral dip method.30,52
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bioRxiv - Microbiology 2019Quote: ... All nine plasmid sequences were verified by Illumina shotgun sequencing in the DH5α host cells and mapping reads to the expected plasmid sequence ...
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bioRxiv - Genomics 2020Quote: ... and the resulting plasmid library was sequenced by Illumina 2 × 150 bp chemistry to acquire oligo-barcode pairings ...
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bioRxiv - Cancer Biology 2022Quote: ... and the resulting plasmid library was sequenced by Illumina 2 × 150 bp chemistry to acquire oligo-barcode pairings ...
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bioRxiv - Cancer Biology 2022Quote: ... the final MPRA plasmid library was sequenced by Illumina 1 × 26 bp chemistry to acquire a baseline representation of each oligo-barcode pair within the library.
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bioRxiv - Molecular Biology 2020Quote: ... Human/Mouse/Rat (Illumina, discontinued), and fragmented by incubating with PNK buffer (NEB ...
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bioRxiv - Genomics 2019Quote: ... mouse and rat (Illumina, USA). Sequencing has been done with 2×250 bp paired-end on a HiSeq 2500 (Illumina ...
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bioRxiv - Evolutionary Biology 2021Quote: Selected plasmid-free clones were sequenced on MiSeq platform (Illumina) as described below to investigate possible single nucleotide mutations (SNPs ...
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bioRxiv - Genomics 2020Quote: ... coli the final MPRA plasmid library was sequenced by Illumina 1 × 31 bp chemistry to acquire a baseline representation of each oligo-barcode pair within the library ...
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bioRxiv - Genomics 2019Quote: ... and linear DNA was digested by plasmid safe (Epicentre, Illumina) at 37°C for 1.5 h ...
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bioRxiv - Immunology 2023Quote: ... For Infinium Mouse Methylation BeadChip (Illumina) arrays ...
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bioRxiv - Systems Biology 2024Quote: ... Illumina BeadArrays (mouse WG-6, Illumina) were used to profile the transcriptome of 33 independent EpiSC samples ...
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bioRxiv - Systems Biology 2024Quote: ... in two growth media conditions (CMAF and Basal)—were profiled by Illumina BeadArrays (mouse WG-6 v2, Illumina). Poor quality profiles were removed ...
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bioRxiv - Microbiology 2022Quote: ... all plasmids expressing novel bNACHT genes were sequence verified by Illumina sequencing (CU Boulder Sequencing Facility) ...
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bioRxiv - Genetics 2023Quote: ... The mm10 mouse genome manifest from Illumina was used as reference ...
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bioRxiv - Genomics 2020Quote: ... DNA was treated with 10U of Plasmid-safe Dnase (Epicentre® Illumina) for 45 minutes at 37°C following thelatest update of the international working group on cccDNAstandardization (Allweisset al. ...
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bioRxiv - Microbiology 2023Quote: ... Sequences of six IncX4 plasmids carrying mcr-1 were extracted from Illumina data and gaps were filled by PCR-based strategy and Sanger sequencing.
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bioRxiv - Synthetic Biology 2022Quote: ... Plasmids were NGS library prepped with Nextera XT DNA Sample Prep Kit (Illumina) and sequenced 2x×150bp by MiSeq (Illumina) ...
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bioRxiv - Genomics 2020Quote: ... and mouse libraries on a NextSeq 500 (Illumina).
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bioRxiv - Neuroscience 2022Quote: ... Ribo-Zero Gold (Human/Mouse/Rat) Kit (Illumina; NEBNext® rRNA Depletion Kit (Human/Mouse/Rat)(E6350 ...
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bioRxiv - Microbiology 2023Quote: ... ‘human/mouse’ and ‘bacteria’ Ribo-Zero kits (Illumina). RNA quality and concentration were verified by BioAnalyzer (Agilent Technologies ...
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bioRxiv - Neuroscience 2023Quote: ... Mouse GRCm38/mm10 genome annotation was accessed from Illumina’s iGenomes repository (available at https://support.illumina.com/sequencing/sequencing_software/igenome.html ...
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bioRxiv - Genomics 2019Quote: The plasmid profiling was performed for isolate SM866 using FosmidMAX DNA Purification kit (Epicenter, Illumina). For this the bacterial sample was grown in 10 ml of LB and incubated for 28 °C for 16 hours ...
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bioRxiv - Evolutionary Biology 2021Quote: ... ∼25ng of each plasmid was incubated with purified Tn5 transposome (pre-loaded with Illumina adapters) at 55 °C for 10 min in the presence of 5 mM MgCl2 and 10 mM TAPS ...
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bioRxiv - Cancer Biology 2020Quote: ... The pooled plasmids library was subjected to deep-sequencing analysis on a MiSeq instrument (Illumina) to verify the identity and representative of sgRNAs in the library ...
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bioRxiv - Cancer Biology 2019Quote: ... and TruSeq Stranded Total RNA Human/Mouse/Rat (Illumina, 20020596) with 100 ng of input and 13 PCR cycles ...
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bioRxiv - Genetics 2019Quote: ... the Ribo-Zero rRNA Removal kit (Human/Mouse/Rat, Illumina) was employed to deplete ribosomal RNA from 20 µg of total human or mouse brain RNA according to the manufacture’s instruction ...
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bioRxiv - Molecular Biology 2022Quote: ... The Ribo-Zero rRNA Removal Kit (Illumina human/mouse/rat) was applied to remove the rRNAs ...
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bioRxiv - Cell Biology 2023Quote: ... Infinium Mouse Methylation BeadChip (Illumina, Inc., San Diego, CA, USA) arrays were used to profile DNA methylation genome wide ...
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bioRxiv - Cancer Biology 2023Quote: ... Illumina Ribo Zero Gold for human/mouse/rat kit (Illumina) was used to remove rRNA during sample preparation per manufacturer’s protocol ...
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bioRxiv - Molecular Biology 2022Quote: ... Clones emitting light were selected for DNA sequencing verification of the entire plasmid (MiniSeq, Illumina, USA).
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bioRxiv - Genomics 2022Quote: ... The representation of the pool was verified after ePCR amplification and after plasmid isolation by Illumina sequencing.
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bioRxiv - Developmental Biology 2020Quote: ... the Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina) was used.
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bioRxiv - Genomics 2019Quote: ... with Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina). The cDNA libraries from human and mouse samples were sequenced on the Illumina HiSeq 2500 and Illumina NextSeq 500 platforms ...
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bioRxiv - Neuroscience 2023Quote: ... and then aligned to the mouse genome using Top-Hat (Illumina) and fragments were assigned to genes using the FeatureCounts program (iCONICS core facility ...
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bioRxiv - Genetics 2022Quote: ... After expansion within E.coli the final massively parallel reporter assay (MPRA) plasmid library was sequenced by Illumina 1×30 bp chemistry to acquire a baseline representation of each oligo within the library.
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bioRxiv - Molecular Biology 2020Quote: ... with ribosomal depletion using Human/Mouse/Rat Ribo-Zero kit (Epicentre/Illumina). All samples were sequenced using a 100 base-pair (bp ...
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bioRxiv - Genomics 2020Quote: ... Illumina TruSeq Stranded Total RNA Ribo-Zero Human/Mouse/Rat Gold (Illumina) was used to construct ribosomal RNA depleted sequencing libraries ...
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bioRxiv - Developmental Biology 2023Quote: ... TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat kit (Illumina) was used to prepare RNA-seq libraries according to manufacturer’s protocol ...
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bioRxiv - Evolutionary Biology 2023Quote: ... (2016) sequenced mouse whole genomes to 11-26x coverage (Illumina HiSeq 2000) from natural populations of house mouse (Mus musculus) ...
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bioRxiv - Cell Biology 2023Quote: ... RNase H or the Ribo-Zero method (human, mouse, plants) (Illumina, USA) was used to remove rRNA ...
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bioRxiv - Genetics 2022Quote: ... The oligo library was expanded by electroporation into E.coli and the resulting plasmid library was sequenced by Illumina 2×150 bp chemistry to acquire barcode/oligo pairings ...
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bioRxiv - Genetics 2024Quote: ... Primers were designed to amplify barcoded donor sequences on the plasmid pools to quantify strain abundance by Illumina sequencing with 2 × 150 bp reads (Novogene).
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bioRxiv - Microbiology 2020Quote: ... Cloning was performed by Gibson and Golden-Gate approaches as appropriate. Large plasmids (e.g. pCB, pCCM) were verified by Illumina resequencing (Harvard MGH DNA Core plasmid sequencing service ...
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bioRxiv - Synthetic Biology 2023Quote: ... RNA and plasmid DNA libraries were sequenced using a 50 cycle SP flow cell on a NovaSeq 6000 (Illumina) using custom sequencing primers (Table S4).
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bioRxiv - Neuroscience 2019Quote: ... and rRNA-depletion (“Ribo-Zero”; Illumina Ribo-Zero Gold Kit (Human/Mouse/Rat), Cat # MRZG126 ...
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bioRxiv - Developmental Biology 2019Quote: ... Sequences were mapped to the reference mouse genome (mm9) with ELAND v2 (Illumina). Only uniquely mapped tags with no base mismatches were used for the analysis ...
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bioRxiv - Genetics 2020Quote: ... or the TruSeq Stranded Total RNA Library Prep Human/Mouse/Rat kit (Illumina) following the manufacturer’s protocol ...