Labshake search
Citations for Illumina :
1 - 50 of 8720 citations for Medium Kit without Serum and with CultureBoost R since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2023Quote: ... 100 ng of total BH RNA with and without RNase R treatment was then used to construct cDNA libraries by Illumina Stranded Total RNA Prep Ligation with Ribo-Zero Plus (Illumina 20072063) ...
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bioRxiv - Molecular Biology 2023Quote: Ribo-Zero Magnetic Kit H/M/R (Epicentre/Illumina) was used to remove ribosomal RNAs and to enrich mRNAs ...
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bioRxiv - Genomics 2020Quote: ... We used Ribo-Zero Magnetic Kit H/M/R (Illumina) to remove rRNAs from total RNA samples for analyses of non-polyadenylated RNAs.
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bioRxiv - Bioengineering 2019Quote: ... provided by the Nextera® (R) XT Index Kit (Illumina, USA). Finally ...
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bioRxiv - Cell Biology 2023Quote: ... Library preparation is performed with or without amplification (Nextera® DNA Flex Library Prep kit or TruSeq® DNA PCR-Free kit, ILLUMINA®), either through automation (MICROLAB Star® ...
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bioRxiv - Neuroscience 2019Quote: ... using the ScriptSeq Complete Gold Kit (H/M/R) (Illumina Inc., San Diego, CA). Samples were fragmented ...
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bioRxiv - Genetics 2020Quote: ... The first PCR used universal primers (without Illumina indexes) to amplify the barcodes ...
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bioRxiv - Genomics 2020Quote: ... and rRNA depletion was performed using Ribo-Zero Magnetic Kit H/M/R (Epicentre/Illumina).
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bioRxiv - Microbiology 2023Quote: ... The NEBNext(R) Ultra II Directional RNA Library prep kit from Illumina (Cat. no. E7760L), was used to construct double-stranded cDNA libraries from the rRNA-depleted RNA ...
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bioRxiv - Genomics 2023Quote: 1 ng of psoralen pull-down DNA (or corresponding Input DNA from the same cells without pull-down) was used to prepare sequencing libraries using a Nextera XT library prep kit (Illumina, Inc) according to the manufacturer protocol ...
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bioRxiv - Cell Biology 2019Quote: ... All RNA samples were depleted for ribosomal RNA before library construction using Ribo-Zero™ Gold Kit H/M/R Kit (Illumina). Hi-Seq run of three independent biological replicates was performed on Illumina HiSeq2500 ...
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bioRxiv - Microbiology 2021Quote: ... metatranscriptomic libraries were prepared directly from total RNA without rRNA removal using the TruSeq RNA Kit (Illumina, Inc., San Diego, CA, USA) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2022Quote: ... RNA-seq libraries were prepared starting from 1µg of RNA using the TruSeq Stranded Total RNA Ribo-Zero H/M/R Gold kit (Illumina). Libraries were quantified in a Qubit system (ThermoFisher ...
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bioRxiv - Developmental Biology 2021Quote: ... according to the manufacturer’s reference guide (document #15066016 v01) with Ribo-Zero Gold Kit (H/M/R) (Illumina, MRZG126). The prepared libraries were sequenced on a HiSeq 2500 system (Illumina).
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bioRxiv - Molecular Biology 2020Quote: ... At least 50 ng of r-RNA depleted RNA was used to generate sequencing libraries using the True-seq small RNA library prep kit (Illumina). All libraries were barcoded and sequenced in parallel on a Next-seq platform for 400 million reads to obtain 75 bp single end reads.
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bioRxiv - Cancer Biology 2021Quote: ... 2×101 paired-end RNA-seq libraries were constructed using TruSeq stranded total RNA H/M/R prep kit and sequenced using the Novaseq6000 system (Illumina). Raw paired-end sequencing reads were mapped to the human genome (build hg38 ...
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bioRxiv - Biochemistry 2019Quote: ... ribosomal (r)RNA was subtracted by hybridization from total RNA samples (100 ng total RNA input) using the RiboZero Magnetic Gold H/M/R Kit (Illumina). Following cleanup by precipitation ...
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bioRxiv - Genomics 2019Quote: ... RNA-seq libraries were prepared from 100 ng of total RNA (obtained as described above for RT-qPCR) using the TruSeq Stranded Total RNA LT Kit with Ribo-Zero H/M/R (all Illumina), according to the manufacturer’s instructions ...
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bioRxiv - Genetics 2020Quote: ... Ribosomal RNA was subtracted by hybridization from total RNA samples using the RiboZero Magnetic Gold H/M/R Kit (Illumina) and the rRNA-subtracted samples were quantified with a Qubit 2.0 (RNA HS Kit ...
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bioRxiv - Immunology 2021Quote: ... These sequences were screened to select those without ambiguous residues and generated from Illumina sequencing technologies using an in-house sequence QC script ...
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bioRxiv - Microbiology 2023Quote: ESC-R-Ec isolates were sequenced by Illumina NovaSeq 6000 or Illumina MiSeq as previously described (33) ...
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bioRxiv - Microbiology 2023Quote: ... Internal segments without read support were removed and replaced by gap filling informed by Illumina reads and using Illumina contigs that were identified by blastn ...
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bioRxiv - Developmental Biology 2020Quote: ... both ribosome footprinting and total RNA samples were depleted of rRNA using the Ribo-Zero Gold rRNA Removal Kit (H/M/R) (Illumina, catalog no. MRZG126) with the modification that the 50°C incubation was not performed for the ribosome footprinting samples ...
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Dynamic chromatin organization and regulatory interactions in human endothelial cell differentiationbioRxiv - Developmental Biology 2022Quote: ... RNA-seq libraries were prepared from total RNA (≥200 nucleotides in length) using the TruSeq Stranded Total RNA Ribo-Zero H/M/R kit (Illumina, RS-122-2201). Libraries were paired-end sequenced on a NextSeq 500 (Illumina ...
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Lactylation-driven FTO-mediated m6A modification of CDK2 aggravates diabetic microvascular anomaliesbioRxiv - Cell Biology 2023Quote: ... purified input RNAs and immunoprecipitated RNA fragments were sent for library construction with the VAHTS Total RNA-Seq (H/M/R) Library Prep Kit for Illumina (Vazyme, Nanjing, China) and sequencing using the Illumina HiSeq 2500 (Illumina, San Diego, CA, USA). Quality control and raw sequencing data filtration were achieved with the FastQC and fastp software ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were prepared with Illumina DNA prep (Illumina(R), San Diego ...
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bioRxiv - Cancer Biology 2019Quote: ... Briefly reads were mapped using TopHat version 2.06 against the reference GRCh37 without alternative haplotypes using the transcript models from UCSD (March 2012) available from Illumina iGenomes Project ...
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bioRxiv - Microbiology 2019Quote: ... Samples were pooled from growth mediums for each isolate and 200 bp cDNA libraries prepared using a TrueSeq Kit (Illumina). These libraries were sequenced in multiplex on a MiSeq (Illumina ...
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bioRxiv - Cell Biology 2023Quote: RNA-seq libraries were generated from total RNA obtained from the input samples from the Ribo-seq experiments described above (i.e., lysates without RNase digestion) using the TrueSeq Stranded Total RNA Library Prep (Illumina, 20020596).
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bioRxiv - Genetics 2023Quote: ... Paired-end read sequencing was done in a NextSeq 500/550 platform using either the 150-cycle Medium Output Kit (Illumina # 20024909), 75 cycles per read ...
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bioRxiv - Microbiology 2023Quote: We evaluated whether SEARCH-TB identified the same transcriptional changes as a conventional RNA-seq method without Mtb targeted amplification (Illumina TrueSeq) after 24-hour in vitro isoniazid (INH ...
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bioRxiv - Cell Biology 2022Quote: ... an R package designed for statistical analysis of gene counts generated from Illumina-based sequencing ...
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bioRxiv - Neuroscience 2022Quote: ... The B-allele frequency and Log R ratio values were downloaded from Illumina GenomeStudio and processed and plotted using the GWASTools package in R (v3.6.1 ...
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bioRxiv - Genomics 2020Quote: ... using 5% PhiX without dark cycles (n = 11) or 10-20% PhiX with 7 dark cycles (protocol provided by Illumina, n = 49). A maximum of 12 samples were pooled in one sequencing run resulting in 19.05 million [17.05 – 21.72] single-end reads per sample on average (supplementary table 3).
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bioRxiv - Genetics 2022Quote: ... gDNA of 293T cells with or without transfection was tested by WGS using the Illumina NovaSeq platform (Illumina, San Diego, CA, USA).
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bioRxiv - Evolutionary Biology 2021Quote: ... sample 2 was treated with 20 U RNase R (Epicentre/Illumina, Cat. No. RNR07250) for 1 h at 37°C to degrade linear RNAs ...
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bioRxiv - Microbiology 2021Quote: ... MERS-CoV samples were treated with RiboZero H/M/R rRNA (Illumina, San Diego, CA) depletion mix following the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2022Quote: ... Linear RNA was digested following standard protocols using Epicentre Ribonuclease R (Illumina, San Diego, USA). Following purification ...
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bioRxiv - Microbiology 2022Quote: ... Selected samples from MPX virus-positive patients were directly sequenced without prior PCR amplification by the Illumina technology with the Nextera XT paired-end strategy on a MiSeq instrument (Illumina Inc., San Diego, CA, USA) or ...
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bioRxiv - Molecular Biology 2021Quote: ... 5ug of RNA from individual tissues were treated with 15 units of RNAse R (Epicentre, Illumina, USA) for 15 minutes at 37 degrees Celsius ...
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bioRxiv - Genomics 2020Quote: ... The B allele frequency (BAF) and the log R ratio (LRR) were extracted from GenomeStudio (Illumina, USA) for representation.
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bioRxiv - Neuroscience 2020Quote: ... The B allele frequency (BAF) and the log R ratio (LRR) were extracted from GenomeStudio (Illumina, USA) for representation.
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bioRxiv - Genomics 2019Quote: ... used GATK HaplotypeCaller50 (version 3.5, code at https://hub.docker.com/r/broadinstitute/gatk3) with high-sensitivity settings from Illumina HiSeq 300x 2×150 bp data for the AJ trio ...
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bioRxiv - Genomics 2020Quote: ... Log R Ratio and B Allele Frequency were extracted using Genome Studio 2.0 (Illumina, San Diego, California, USA). Data available upon request.
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bioRxiv - Cell Biology 2023Quote: ... Library preparation from RNA is performed with amplification (TruSeq Stranded Total RNA H/M/R-Gold, ILLUMINA®), either through automation (MICROLAB Star® ...
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bioRxiv - Microbiology 2020Quote: ... 3 to 12 µl of extracted RNA was depleted of rRNA using Ribo-Zero Gold H/M/R (Illumina) and then reverse-transcribed using random hexamers and SuperScript IV (ThermoFisher Scientific) ...
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bioRxiv - Cancer Biology 2022Quote: ... Log R Ratio (LRR) data was extracted for all probes and array annotation obtained from Illumina (InfiniumOmniExpress-24v1-3_A1). LRR data was then smoothed and segmentation called using the CBS algorithm from the DNACopy54 ...
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bioRxiv - Neuroscience 2022Quote: ... B allele frequency and log R ratio of each single nucleotide polymorphism (SNP) marker were collected from GenomeStudio (Illumina) and analyzed with PennCNV [70] and QuantiSNP [10] with default parameter settings ...
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bioRxiv - Genomics 2019Quote: The statistical package edgeR (Version 3.7) within the R software suite (Version 3.1) was used to analyse the RNA-seq (Illumina Hi-Seq) data and to identify transcripts significantly differentially expressed between P ...
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bioRxiv - Genetics 2021Quote: ... the log R (LRR) intensity measurements and B allele frequency (BAF) for each sample at each probe were exported from Illumina’s Genome Studio software ...