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Citations for Illumina :
1 - 33 of 33 citations for Influenza Virus Hemagglutinin HA H1N1 since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Pathology 2020Quote: Library preparation for NHBE samples infected with influenza A virus (IAV) was performed using the TruSeq Stranded mRNA Library Prep Kit (Illumina) with Poly-A enrichment ...
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bioRxiv - Immunology 2022Quote: ... The virus sequence was confirmed by Illumina sequencing and did not differ from the parental virus ...
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bioRxiv - Microbiology 2022Quote: ... Influenza whole genome sequencing libraries were prepared using the Nextera XT DNA library preparation kit (Illumina, San Diego, CA). Libraries were selected and purified using 0.7× Agencourt AMPure XP Magnetic Beads (Beckman Coulter Life Sciences ...
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bioRxiv - Microbiology 2023Quote: ... and Respiratory Virus Oligo Panel v2 (Illumina #20044311). Tagmented cDNAs were amplified to add indexes and adapters ...
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bioRxiv - Immunology 2021Quote: ... The identity of the virus was confirmed by Illumina sequencing (see supplementary table 1).
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bioRxiv - Genomics 2020Quote: ... Nextera Flex Enrichment Kit with Respiratory Virus Oligo Panel (Illumina Inc, USA) for viral RNA capture and sequencing ...
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bioRxiv - Genomics 2020Quote: ... with the respiratory virus oligo panel including SARS-CoV-2 probes (Illumina, San Diego ...
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bioRxiv - Microbiology 2019Quote: ... Libraries from different virus isolates were pooled and sequenced on iSeq 100 (Illumina) with 2×75bp reads.
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bioRxiv - Genomics 2020Quote: ... samples were enrichment with the Respiratory Virus Oligos Panel (Illumina, Catalog no. 20042472), which features ∼7800 probes designed to detect respiratory viruses ...
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bioRxiv - Immunology 2021Quote: Virus stocks were sequenced using a MiniSeq platform (Illumina, Inc; San Diego, CA, USA). In brief ...
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bioRxiv - Genetics 2019Quote: ... HCHS/SOL contributed 7,155 HA individuals (Illumina Omni 2.5; phg000663.v1).
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bioRxiv - Microbiology 2023Quote: Sequencing library has been paired-end sequenced on Miseq platform (Illumina) with MiSeq Reagent Kit v3 allowing 600 sequencing cycles to be performed ...
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bioRxiv - Microbiology 2020Quote: ... The virus was passaged three times in VeroE6 cells and genotype sequence confirmed by Illumina sequencing ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Sequencing has been performed on a NovaSeq6000 S4 lane (Illumina, California, USA) using a paired-end read length of 2×150 pb with the Illumina NovaSeq Reagent Kits.
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bioRxiv - Molecular Biology 2023Quote: ... The stability of the virus genotype after passage was confirmed via Sanger sequencing and by Illumina sequencing ...
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Loss of microbial diversity and body site heterogeneity in individuals with Hidradenitis SuppurativabioRxiv - Microbiology 2019Quote: ... tailed PCR approach that has been validated by Illumina (Illumina, Inc, San Diego, CA).
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bioRxiv - Plant Biology 2022Quote: ... assignment of quality scores) has been performed with RTA (real- time analysis software; Illumina) installed on the sequencing platform.
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bioRxiv - Systems Biology 2023Quote: Primary analysis has been performed with our in-house developed tool SysISTD (SysFate Illumina Spatial transcriptomics Demultiplexer ...
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bioRxiv - Evolutionary Biology 2023Quote: ... The whole genome has been sequenced on a NovaSeq SP system (Illumina, 2X150 bp).
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bioRxiv - Neuroscience 2019Quote: ... Gene expression in these samples has been obtained using paired-end RNA-seq (Illumina TruSeq), and genotype data from whole genome sequencing ...
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bioRxiv - Microbiology 2020Quote: ... At Gdansk two independent protocols were used for SARS-CoV-2 genome sequencing: Illumina RNA prep with enrichment for respiratory virus oligos panel V2 followed by Illumina MiniSeq medium output run that produced 150-nucleotide paired-end reads ...
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bioRxiv - Immunology 2022Quote: Identity of virus stocks were confirmed by next-generation sequencing using a MiniSeq platform (Illumina, Inc; San Diego, CA, USA). RNA was purified from Trizol-inactivated material using a Direct-zol RNA Miniprep kit (Zymo Research ...
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bioRxiv - Microbiology 2022Quote: ... Passage 1 virus stocks were further produced in Vero TMPRSS2 cells and the presence of mutations was confirmed by Illumina sequencing ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were generated for three separate plants for each virus Libraries were sequenced (single-end, 75 nt) using an NextSeq 500 platform (Illumina).
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bioRxiv - Genomics 2019Quote: ... Sequencing has been done with 2×250 bp paired-end on a HiSeq 2500 (Illumina, USA).
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bioRxiv - Evolutionary Biology 2024Quote: ... Prepared DNA has then been sequenced in paired-ends on our in-lab sequencer (iSeq100; Illumina).
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bioRxiv - Genomics 2021Quote: ... DNA fragments of the SARS CoV-2 genome were hybridized with biotinylated respiratory virus oligos (Illumina Inc., San Diego, CA, USA). The DNA fragments hybridized with the custom oligos were captured using streptavidin magnetic beads ...
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bioRxiv - Microbiology 2023Quote: The whole genome sequence of the mink-derived H5N1 clade 2.3.4.4b virus was determined using the Illumina MiSeq sequencing platform (Illumina, San Diego, CA, USA). Briefly ...
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bioRxiv - Microbiology 2019Quote: All raw sequence data has been uploaded to the NCBI Sequence Read Archive (SRA) under Bioproject PRJNA545001 (Illumina SRA numbers SRX6673579-SRX6673594 ...
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bioRxiv - Neuroscience 2023Quote: ... cDNA synthesis and library preparation were done following the manufacturer’s instructions (chemistry V3.1) and library has been sequenced using the Novaseq 6000 (Illumina) to reach 30k reads per nucleus ...
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bioRxiv - Plant Biology 2020Quote: ... Paired-end sequencing libraries (150bp × 2) were constructed for the HA and LA samples following manufacturer’s instructions (Illumina, USA). The libraries were sequenced in Illumina Genome Analyzer ×10 platform by NBT ...
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bioRxiv - Genomics 2020Quote: Total RNA was extracted from Epstein–Barr-virus-transformed lymphoblastoid cell lines (LCLs) by following the Illumina TruSeq v2 RNA Sample Preparation protocol (Illumina, Inc., San Diego, CA) by the Department of Genetic Medicine and Development at the University of Geneva ...
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bioRxiv - Cancer Biology 2024Quote: ... and >95% of all exons of that gene was represented on the sequencing platform used to generate the data (GENIE has 104 different platforms, mostly Illumina-based but differing in genes being captured) ...